ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:51969:51987

Extra

PDB:
ATOM 1 O3' G A1968 192.451 -18.961 187.328 1.00 57.23 O
ATOM 2 P A A1969 191.401 -20.079 186.836 1.00 52.42 P
ATOM 3 OP1 A A1969 191.182 -21.001 187.985 1.00 52.09 O
ATOM 4 OP2 A A1969 191.907 -20.636 185.561 1.00 53.11 O
ATOM 5 O5' A A1969 190.088 -19.239 186.564 1.00 52.14 O
ATOM 6 C5' A A1969 188.814 -19.822 186.764 1.00 51.93 C
ATOM 7 C4' A A1969 187.810 -19.244 185.824 1.00 52.02 C
ATOM 8 O4' A A1969 187.375 -17.952 186.323 1.00 51.54 O
ATOM 9 C3' A A1969 188.323 -18.989 184.414 1.00 52.63 C
ATOM 10 O3' A A1969 187.268 -19.253 183.490 1.00 52.86 O
ATOM 11 C2' A A1969 188.630 -17.489 184.445 1.00 52.43 C
ATOM 12 O2' A A1969 188.649 -16.850 183.190 1.00 52.84 O
ATOM 13 C1' A A1969 187.495 -16.995 185.300 1.00 51.81 C
ATOM 14 N9 A A1969 187.708 -15.695 185.907 1.00 51.41 N
ATOM 15 C8 A A1969 188.460 -15.406 187.005 1.00 51.07 C
ATOM 16 N7 A A1969 188.416 -14.134 187.312 1.00 50.76 N
ATOM 17 C5 A A1969 187.561 -13.561 186.387 1.00 50.89 C
ATOM 18 C6 A A1969 187.098 -12.242 186.186 1.00 50.71 C
ATOM 19 N6 A A1969 187.446 -11.244 186.973 1.00 50.34 N
ATOM 20 N1 A A1969 186.265 -11.960 185.160 1.00 50.94 N
ATOM 21 C2 A A1969 185.915 -13.012 184.399 1.00 51.32 C
ATOM 22 N3 A A1969 186.269 -14.310 184.488 1.00 51.52 N
ATOM 23 C4 A A1969 187.108 -14.527 185.517 1.00 51.29 C
ATOM 24 P U A1970 187.266 -20.602 182.641 1.00 78.82 P
ATOM 25 OP1 U A1970 188.659 -20.922 182.311 1.00 79.26 O
ATOM 26 OP2 U A1970 186.315 -20.404 181.542 1.00 79.08 O
ATOM 27 O5' U A1970 186.712 -21.666 183.667 1.00 78.49 O
TER

ATOM 1 O3' U B1986 185.652 -3.506 179.310 1.00 55.31 O
ATOM 2 P U B1987 186.772 -4.614 179.597 1.00 53.97 P
ATOM 3 OP1 U B1987 188.085 -4.015 179.234 1.00 54.29 O
ATOM 4 OP2 U B1987 186.341 -5.848 178.904 1.00 54.31 O
ATOM 5 O5' U B1987 186.687 -4.821 181.177 1.00 53.31 O
ATOM 6 C5' U B1987 187.103 -3.805 182.085 1.00 52.91 C
ATOM 7 C4' U B1987 186.955 -4.260 183.517 1.00 52.35 C
ATOM 8 O4' U B1987 185.763 -5.075 183.653 1.00 52.17 O
ATOM 9 C3' U B1987 188.081 -5.131 184.036 1.00 52.42 C
ATOM 10 O3' U B1987 189.142 -4.362 184.550 1.00 52.33 O
ATOM 11 C2' U B1987 187.411 -6.018 185.082 1.00 51.97 C
ATOM 12 O2' U B1987 187.325 -5.340 186.323 1.00 51.41 O
ATOM 13 C1' U B1987 185.996 -6.151 184.536 1.00 51.96 C
ATOM 14 N1 U B1987 185.738 -7.459 183.829 1.00 52.34 N
ATOM 15 C2 U B1987 185.839 -8.713 184.462 1.00 52.24 C
ATOM 16 O2 U B1987 186.201 -8.897 185.582 1.00 51.88 O
ATOM 17 N3 U B1987 185.526 -9.825 183.752 1.00 52.60 N
ATOM 18 C4 U B1987 185.102 -9.811 182.436 1.00 53.07 C
ATOM 19 O4 U B1987 184.844 -10.871 181.863 1.00 53.39 O
ATOM 20 C5 U B1987 184.994 -8.514 181.832 1.00 53.14 C
ATOM 21 C6 U B1987 185.295 -7.416 182.532 1.00 52.78 C
ATOM 22 P G B1988 190.633 -4.554 184.004 1.00 49.41 P
ATOM 23 OP1 G B1988 191.395 -3.351 184.389 1.00 49.29 O
ATOM 24 OP2 G B1988 190.540 -4.894 182.598 1.00 49.99 O
ATOM 25 O5' G B1988 191.144 -5.793 184.823 1.00 49.30 O
TER

Atoms:
OP1: (191.182,-21.001,187.985)
OP2: (191.907,-20.636,185.561)
C3': (188.323,-18.989,184.414)
C1': (187.495,-16.995,185.300)
C5': (188.814,-19.822,186.764)
O4': (187.375,-17.952,186.323)
C8: (188.460,-15.406,187.005)
O2': (188.649,-16.850,183.190)
C6: (187.098,-12.242,186.186)
C5: (187.561,-13.561,186.387)
C4: (187.108,-14.527,185.517)
P: (191.401,-20.079,186.836)
C4': (187.810,-19.244,185.824)
C2': (188.630,-17.489,184.445)
C2: (185.915,-13.012,184.399)
N1: (186.265,-11.960,185.160)
N3: (186.269,-14.310,184.488)
N6: (187.446,-11.244,186.973)
N7: (188.416,-14.134,187.312)
N9: (187.708,-15.695,185.907)
O5': (190.088,-19.239,186.564)
O3': (187.268,-19.253,183.490)
C4: (185.102,-9.811,182.436)
N3: (185.526,-9.825,183.752)
OP1: (188.085,-4.015,179.234)
OP2: (186.341,-5.848,178.904)
C2: (185.839,-8.713,184.462)
C1': (185.996,-6.151,184.536)
C3': (188.081,-5.131,184.036)
O5': (186.687,-4.821,181.177)
O4': (185.763,-5.075,183.653)
C5': (187.103,-3.805,182.085)
P: (186.772,-4.614,179.597)
C4': (186.955,-4.260,183.517)
C2': (187.411,-6.018,185.082)
O2': (187.325,-5.340,186.323)
N1: (185.738,-7.459,183.829)
O4: (184.844,-10.871,181.863)
O2: (186.201,-8.897,185.582)
C6: (185.295,-7.416,182.532)
C5: (184.994,-8.514,181.832)
O3': (189.142,-4.362,184.550)
Image (generated by PyMOL):
PyMOL image
show in jmol