ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:P45:P50

Extra

PDB:
ATOM 1 O3' G A 44 35.410 40.668 2.378 1.00 42.02 O
ATOM 2 P A A 45 35.889 39.242 1.867 1.00 41.55 P
ATOM 3 OP1 A A 45 37.219 39.434 1.228 1.00 41.67 O
ATOM 4 OP2 A A 45 34.778 38.619 1.109 1.00 41.24 O
ATOM 5 O5' A A 45 36.109 38.441 3.227 1.00 41.19 O
ATOM 6 C5' A A 45 37.364 38.553 3.861 1.00 41.06 C
ATOM 7 C4' A A 45 37.532 37.475 4.904 1.00 40.42 C
ATOM 8 O4' A A 45 36.475 37.599 5.872 1.00 39.61 O
ATOM 9 C3' A A 45 37.427 36.057 4.394 1.00 39.91 C
ATOM 10 O3' A A 45 38.648 35.592 3.880 1.00 40.08 O
ATOM 11 C2' A A 45 37.072 35.319 5.659 1.00 39.43 C
ATOM 12 O2' A A 45 38.162 35.156 6.534 1.00 38.80 O
ATOM 13 C1' A A 45 36.066 36.299 6.233 1.00 39.61 C
ATOM 14 N9 A A 45 34.685 36.089 5.817 1.00 38.36 N
ATOM 15 C8 A A 45 33.919 36.808 4.957 1.00 38.93 C
ATOM 16 N7 A A 45 32.699 36.363 4.831 1.00 38.92 N
ATOM 17 C5 A A 45 32.669 35.271 5.673 1.00 39.17 C
ATOM 18 C6 A A 45 31.656 34.352 6.016 1.00 38.68 C
ATOM 19 N6 A A 45 30.416 34.355 5.522 1.00 38.30 N
ATOM 20 N1 A A 45 31.986 33.399 6.900 1.00 39.25 N
ATOM 21 C2 A A 45 33.224 33.346 7.410 1.00 39.77 C
ATOM 22 N3 A A 45 34.253 34.151 7.167 1.00 39.73 N
ATOM 23 C4 A A 45 33.892 35.099 6.286 1.00 38.75 C
ATOM 24 P G A 46 38.579 34.558 2.679 1.00 41.44 P
ATOM 25 OP1 G A 46 39.959 34.266 2.210 1.00 42.85 O
ATOM 26 OP2 G A 46 37.560 35.029 1.711 1.00 40.97 O
ATOM 27 O5' G A 46 38.008 33.254 3.380 1.00 42.30 O
TER

ATOM 1 O3' U B 49 26.656 23.841 6.176 1.00 53.40 O
ATOM 2 P U B 50 27.658 24.758 7.002 1.00 53.11 P
ATOM 3 OP1 U B 50 28.988 24.665 6.370 1.00 52.76 O
ATOM 4 OP2 U B 50 27.514 24.510 8.449 1.00 51.63 O
ATOM 5 O5' U B 50 27.079 26.214 6.712 1.00 52.09 O
ATOM 6 C5' U B 50 25.743 26.572 6.958 1.00 49.90 C
ATOM 7 C4' U B 50 25.527 27.958 6.379 1.00 48.89 C
ATOM 8 O4' U B 50 26.363 28.911 7.065 1.00 49.06 O
ATOM 9 C3' U B 50 25.913 28.115 4.918 1.00 48.02 C
ATOM 10 O3' U B 50 25.074 29.050 4.269 1.00 49.07 O
ATOM 11 C2' U B 50 27.343 28.644 4.976 1.00 47.52 C
ATOM 12 O2' U B 50 27.719 29.375 3.826 1.00 47.21 O
ATOM 13 C1' U B 50 27.251 29.558 6.180 1.00 46.69 C
ATOM 14 N1 U B 50 28.507 29.793 6.946 1.00 46.37 N
ATOM 15 C2 U B 50 29.206 30.968 6.821 1.00 46.13 C
ATOM 16 O2 U B 50 28.888 31.860 6.072 1.00 46.47 O
ATOM 17 N3 U B 50 30.337 31.075 7.588 1.00 46.40 N
ATOM 18 C4 U B 50 30.855 30.158 8.468 1.00 46.14 C
ATOM 19 O4 U B 50 31.886 30.401 9.085 1.00 45.90 O
ATOM 20 C5 U B 50 30.076 28.956 8.559 1.00 46.79 C
ATOM 21 C6 U B 50 28.965 28.826 7.814 1.00 46.97 C
ATOM 22 P C B 51 23.529 28.803 3.956 1.00 49.11 P
ATOM 23 OP1 C B 51 23.210 29.943 3.083 1.00 50.01 O
ATOM 24 OP2 C B 51 22.772 28.534 5.196 1.00 49.10 O
ATOM 25 O5' C B 51 23.487 27.467 3.110 1.00 50.76 O
TER

Atoms:
OP1: (37.219,39.434,1.228)
OP2: (34.778,38.619,1.109)
C3': (37.427,36.057,4.394)
C1': (36.066,36.299,6.233)
C5': (37.364,38.553,3.861)
O4': (36.475,37.599,5.872)
C8: (33.919,36.808,4.957)
O2': (38.162,35.156,6.534)
C6: (31.656,34.352,6.016)
C5: (32.669,35.271,5.673)
C4: (33.892,35.099,6.286)
P: (35.889,39.242,1.867)
C4': (37.532,37.475,4.904)
C2': (37.072,35.319,5.659)
C2: (33.224,33.346,7.410)
N1: (31.986,33.399,6.900)
N3: (34.253,34.151,7.167)
N6: (30.416,34.355,5.522)
N7: (32.699,36.363,4.831)
N9: (34.685,36.089,5.817)
O5': (36.109,38.441,3.227)
O3': (38.648,35.592,3.880)
C4: (30.855,30.158,8.468)
N3: (30.337,31.075,7.588)
OP1: (28.988,24.665,6.370)
OP2: (27.514,24.510,8.449)
C2: (29.206,30.968,6.821)
C1': (27.251,29.558,6.180)
C3': (25.913,28.115,4.918)
O5': (27.079,26.214,6.712)
O4': (26.363,28.911,7.065)
C5': (25.743,26.572,6.958)
P: (27.658,24.758,7.002)
C4': (25.527,27.958,6.379)
C2': (27.343,28.644,4.976)
O2': (27.719,29.375,3.826)
N1: (28.507,29.793,6.946)
O4: (31.886,30.401,9.085)
O2: (28.888,31.860,6.072)
C6: (28.965,28.826,7.814)
C5: (30.076,28.956,8.559)
O3': (25.074,29.050,4.269)
Image (generated by PyMOL):
PyMOL image
show in jmol