ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:02566:02565

Extra

PDB:
ATOM 1 O3' U A2565 67.780 173.126 112.496 1.00 42.56 O
ATOM 2 P A A2566 66.293 173.364 113.074 1.00 44.75 P
ATOM 3 OP1 A A2566 65.490 172.102 112.966 1.00 45.72 O
ATOM 4 OP2 A A2566 65.800 174.613 112.429 1.00 40.33 O
ATOM 5 O5' A A2566 66.515 173.684 114.622 1.00 42.83 O
ATOM 6 C5' A A2566 66.913 174.998 115.044 1.00 41.66 C
ATOM 7 C4' A A2566 65.722 175.740 115.586 1.00 41.31 C
ATOM 8 O4' A A2566 65.331 175.155 116.856 1.00 41.88 O
ATOM 9 C3' A A2566 65.947 177.197 115.930 1.00 40.72 C
ATOM 10 O3' A A2566 65.892 178.011 114.765 1.00 41.30 O
ATOM 11 C2' A A2566 64.795 177.455 116.886 1.00 40.76 C
ATOM 12 O2' A A2566 63.553 177.547 116.217 1.00 42.51 O
ATOM 13 C1' A A2566 64.797 176.162 117.696 1.00 41.31 C
ATOM 14 N9 A A2566 65.633 176.268 118.894 1.00 44.04 N
ATOM 15 C8 A A2566 66.908 175.798 119.114 1.00 44.24 C
ATOM 16 N7 A A2566 67.383 176.100 120.298 1.00 44.37 N
ATOM 17 C5 A A2566 66.352 176.812 120.899 1.00 45.07 C
ATOM 18 C6 A A2566 66.225 177.424 122.164 1.00 46.72 C
ATOM 19 N6 A A2566 67.181 177.418 123.103 1.00 46.71 N
ATOM 20 N1 A A2566 65.062 178.051 122.440 1.00 46.40 N
ATOM 21 C2 A A2566 64.100 178.056 121.515 1.00 45.41 C
ATOM 22 N3 A A2566 64.097 177.521 120.303 1.00 45.53 N
ATOM 23 C4 A A2566 65.267 176.910 120.051 1.00 44.42 C
ATOM 24 P C A2567 67.214 178.783 114.274 1.00 42.08 P
ATOM 25 OP1 C A2567 66.843 179.687 113.151 1.00 41.68 O
ATOM 26 OP2 C A2567 68.305 177.782 114.086 1.00 41.29 O
ATOM 27 O5' C A2567 67.618 179.679 115.522 1.00 41.00 O
TER

ATOM 1 O3' G B2564 68.740 170.736 117.245 1.00 36.27 O
ATOM 2 P U B2565 69.401 172.192 117.126 1.00 36.83 P
ATOM 3 OP1 U B2565 70.815 172.069 117.574 1.00 33.34 O
ATOM 4 OP2 U B2565 68.491 173.141 117.817 1.00 37.66 O
ATOM 5 O5' U B2565 69.360 172.528 115.565 1.00 38.02 O
ATOM 6 C5' U B2565 70.167 171.788 114.627 1.00 38.98 C
ATOM 7 C4' U B2565 69.869 172.212 113.208 1.00 39.70 C
ATOM 8 O4' U B2565 70.811 171.527 112.349 1.00 42.60 O
ATOM 9 C3' U B2565 68.459 171.883 112.717 1.00 41.95 C
ATOM 10 O3' U B2565 67.780 173.126 112.496 1.00 42.56 O
ATOM 11 C2' U B2565 68.655 171.232 111.338 1.00 43.16 C
ATOM 12 O2' U B2565 68.522 172.139 110.268 1.00 47.80 O
ATOM 13 C1' U B2565 70.121 170.812 111.352 1.00 41.91 C
ATOM 14 N1 U B2565 70.504 169.390 111.390 1.00 41.78 N
ATOM 15 C2 U B2565 71.167 168.909 110.266 1.00 42.84 C
ATOM 16 O2 U B2565 71.367 169.585 109.287 1.00 47.74 O
ATOM 17 N3 U B2565 71.591 167.612 110.328 1.00 40.27 N
ATOM 18 C4 U B2565 71.412 166.741 111.357 1.00 42.67 C
ATOM 19 O4 U B2565 71.870 165.599 111.249 1.00 44.57 O
ATOM 20 C5 U B2565 70.683 167.282 112.491 1.00 42.30 C
ATOM 21 C6 U B2565 70.260 168.564 112.463 1.00 40.67 C
ATOM 22 P A B2566 66.293 173.364 113.074 1.00 44.75 P
ATOM 23 OP1 A B2566 65.490 172.102 112.966 1.00 45.72 O
ATOM 24 OP2 A B2566 65.800 174.613 112.429 1.00 40.33 O
ATOM 25 O5' A B2566 66.515 173.684 114.622 1.00 42.83 O
TER

Atoms:
OP1: (65.490,172.102,112.966)
OP2: (65.800,174.613,112.429)
C3': (65.947,177.197,115.930)
C1': (64.797,176.162,117.696)
C5': (66.913,174.998,115.044)
O4': (65.331,175.155,116.856)
C8: (66.908,175.798,119.114)
O2': (63.553,177.547,116.217)
C6: (66.225,177.424,122.164)
C5: (66.352,176.812,120.899)
C4: (65.267,176.910,120.051)
P: (66.293,173.364,113.074)
C4': (65.722,175.740,115.586)
C2': (64.795,177.455,116.886)
C2: (64.100,178.056,121.515)
N1: (65.062,178.051,122.440)
N3: (64.097,177.521,120.303)
N6: (67.181,177.418,123.103)
N7: (67.383,176.100,120.298)
N9: (65.633,176.268,118.894)
O5': (66.515,173.684,114.622)
O3': (65.892,178.011,114.765)
C4: (71.412,166.741,111.357)
N3: (71.591,167.612,110.328)
OP1: (70.815,172.069,117.574)
OP2: (68.491,173.141,117.817)
C2: (71.167,168.909,110.266)
C1': (70.121,170.812,111.352)
C3': (68.459,171.883,112.717)
O5': (69.360,172.528,115.565)
O4': (70.811,171.527,112.349)
C5': (70.167,171.788,114.627)
P: (69.401,172.192,117.126)
C4': (69.869,172.212,113.208)
C2': (68.655,171.232,111.338)
O2': (68.522,172.139,110.268)
N1: (70.504,169.390,111.390)
O4: (71.870,165.599,111.249)
O2: (71.367,169.585,109.287)
C6: (70.260,168.564,112.463)
C5: (70.683,167.282,112.491)
O3': (67.780,173.126,112.496)
Image (generated by PyMOL):
PyMOL image
show in jmol