ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1IL2:C14:C46

Extra

PDB:
ATOM 1 O3' A A 13 9.843 44.706 -1.648 1.00 60.62 O
ATOM 2 P A A 14 10.973 44.485 -2.764 1.00 63.39 P
ATOM 3 OP1 A A 14 10.374 44.679 -4.106 1.00 64.83 O
ATOM 4 OP2 A A 14 11.676 43.214 -2.453 1.00 61.72 O
ATOM 5 O5' A A 14 12.010 45.655 -2.467 1.00 63.20 O
ATOM 6 C5' A A 14 11.580 47.021 -2.407 1.00 61.15 C
ATOM 7 C4' A A 14 12.725 47.903 -1.986 1.00 63.65 C
ATOM 8 O4' A A 14 13.048 47.652 -0.596 1.00 64.76 O
ATOM 9 C3' A A 14 14.027 47.668 -2.731 1.00 63.65 C
ATOM 10 O3' A A 14 14.053 48.358 -3.974 1.00 63.26 O
ATOM 11 C2' A A 14 15.070 48.172 -1.741 1.00 62.18 C
ATOM 12 O2' A A 14 15.212 49.577 -1.769 1.00 59.81 O
ATOM 13 C1' A A 14 14.447 47.766 -0.407 1.00 65.46 C
ATOM 14 N9 A A 14 14.945 46.474 0.071 1.00 67.70 N
ATOM 15 C8 A A 14 14.381 45.240 -0.115 1.00 67.07 C
ATOM 16 N7 A A 14 15.069 44.258 0.416 1.00 66.12 N
ATOM 17 C5 A A 14 16.161 44.897 0.992 1.00 65.03 C
ATOM 18 C6 A A 14 17.266 44.406 1.702 1.00 65.03 C
ATOM 19 N6 A A 14 17.464 43.117 1.966 1.00 70.03 N
ATOM 20 N1 A A 14 18.173 45.307 2.143 1.00 66.28 N
ATOM 21 C2 A A 14 17.974 46.600 1.876 1.00 64.40 C
ATOM 22 N3 A A 14 16.977 47.177 1.215 1.00 63.79 N
ATOM 23 C4 A A 14 16.095 46.259 0.791 1.00 64.91 C
TER

ATOM 1 O3' A B 45 22.810 40.661 10.749 1.00 55.83 O
ATOM 2 P U B 46 24.043 41.434 10.063 1.00 57.97 P
ATOM 3 OP1 U B 46 25.217 40.526 10.065 1.00 55.19 O
ATOM 4 OP2 U B 46 24.139 42.765 10.709 1.00 60.08 O
ATOM 5 O5' U B 46 23.570 41.655 8.559 1.00 60.63 O
ATOM 6 C5' U B 46 24.105 40.858 7.484 1.00 65.94 C
ATOM 7 C4' U B 46 22.979 40.238 6.693 1.00 71.82 C
ATOM 8 O4' U B 46 21.990 41.263 6.404 1.00 72.13 O
ATOM 9 C3' U B 46 23.373 39.614 5.357 1.00 73.74 C
ATOM 10 O3' U B 46 22.612 38.425 5.142 1.00 82.38 O
ATOM 11 C2' U B 46 22.995 40.700 4.349 1.00 72.11 C
ATOM 12 O2' U B 46 22.657 40.233 3.059 1.00 68.16 O
ATOM 13 C1' U B 46 21.778 41.341 5.011 1.00 71.62 C
ATOM 14 N1 U B 46 21.612 42.755 4.650 1.00 67.71 N
ATOM 15 C2 U B 46 20.485 43.101 3.931 1.00 66.36 C
ATOM 16 O2 U B 46 19.646 42.290 3.588 1.00 65.12 O
ATOM 17 N3 U B 46 20.376 44.435 3.631 1.00 71.26 N
ATOM 18 C4 U B 46 21.265 45.437 3.968 1.00 71.17 C
ATOM 19 O4 U B 46 21.012 46.600 3.649 1.00 68.63 O
ATOM 20 C5 U B 46 22.413 44.996 4.704 1.00 69.65 C
ATOM 21 C6 U B 46 22.543 43.701 5.013 1.00 68.95 C
TER

Atoms:
OP1: (10.374,44.679,-4.106)
OP2: (11.676,43.214,-2.453)
C3': (14.027,47.668,-2.731)
C1': (14.447,47.766,-0.407)
C5': (11.580,47.021,-2.407)
O4': (13.048,47.652,-0.596)
C8: (14.381,45.240,-0.115)
O2': (15.212,49.577,-1.769)
C6: (17.266,44.406,1.702)
C5: (16.161,44.897,0.992)
C4: (16.095,46.259,0.791)
P: (10.973,44.485,-2.764)
C4': (12.725,47.903,-1.986)
C2': (15.070,48.172,-1.741)
C2: (17.974,46.600,1.876)
N1: (18.173,45.307,2.143)
N3: (16.977,47.177,1.215)
N6: (17.464,43.117,1.966)
N7: (15.069,44.258,0.416)
N9: (14.945,46.474,0.071)
O5': (12.010,45.655,-2.467)
O3': (14.053,48.358,-3.974)
C4: (21.265,45.437,3.968)
N3: (20.376,44.435,3.631)
OP1: (25.217,40.526,10.065)
OP2: (24.139,42.765,10.709)
C2: (20.485,43.101,3.931)
C1': (21.778,41.341,5.011)
C3': (23.373,39.614,5.357)
O5': (23.570,41.655,8.559)
O4': (21.990,41.263,6.404)
C5': (24.105,40.858,7.484)
P: (24.043,41.434,10.063)
C4': (22.979,40.238,6.693)
C2': (22.995,40.700,4.349)
O2': (22.657,40.233,3.059)
N1: (21.612,42.755,4.650)
O4: (21.012,46.600,3.649)
O2: (19.646,42.290,3.588)
C6: (22.543,43.701,5.013)
C5: (22.413,44.996,4.704)
O3': (22.612,38.425,5.142)
Image (generated by PyMOL):
PyMOL image
show in jmol