ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:Q45:Q50

Extra

PDB:
ATOM 1 O3' G A 44 6.253 38.675 45.719 1.00 46.16 O
ATOM 2 P A A 45 6.206 37.292 46.529 1.00 46.61 P
ATOM 3 OP1 A A 45 4.874 37.207 47.170 1.00 46.62 O
ATOM 4 OP2 A A 45 7.412 37.173 47.390 1.00 46.51 O
ATOM 5 O5' A A 45 6.295 36.215 45.343 1.00 44.78 O
ATOM 6 C5' A A 45 5.119 35.841 44.652 1.00 43.98 C
ATOM 7 C4' A A 45 5.349 34.677 43.708 1.00 43.24 C
ATOM 8 O4' A A 45 6.286 35.057 42.673 1.00 42.80 O
ATOM 9 C3' A A 45 5.987 33.441 44.309 1.00 43.36 C
ATOM 10 O3' A A 45 5.027 32.655 44.998 1.00 44.08 O
ATOM 11 C2' A A 45 6.490 32.756 43.046 1.00 42.62 C
ATOM 12 O2' A A 45 5.453 32.168 42.286 1.00 42.98 O
ATOM 13 C1' A A 45 7.081 33.948 42.311 1.00 41.76 C
ATOM 14 N9 A A 45 8.470 34.227 42.672 1.00 40.44 N
ATOM 15 C8 A A 45 8.937 35.272 43.416 1.00 40.12 C
ATOM 16 N7 A A 45 10.236 35.273 43.578 1.00 39.98 N
ATOM 17 C5 A A 45 10.653 34.147 42.897 1.00 39.62 C
ATOM 18 C6 A A 45 11.924 33.577 42.683 1.00 39.34 C
ATOM 19 N6 A A 45 13.053 34.093 43.165 1.00 39.34 N
ATOM 20 N1 A A 45 11.997 32.448 41.949 1.00 39.76 N
ATOM 21 C2 A A 45 10.867 31.918 41.463 1.00 39.90 C
ATOM 22 N3 A A 45 9.618 32.364 41.599 1.00 40.12 N
ATOM 23 C4 A A 45 9.578 33.491 42.331 1.00 39.91 C
ATOM 24 P G A 46 5.436 31.887 46.340 1.00 43.94 P
ATOM 25 OP1 G A 46 4.202 31.216 46.821 1.00 43.54 O
ATOM 26 OP2 G A 46 6.155 32.833 47.225 1.00 43.17 O
ATOM 27 O5' G A 46 6.486 30.788 45.829 1.00 43.71 O
TER

ATOM 1 O3' U B 49 19.915 25.855 43.763 1.00 67.94 O
ATOM 2 P U B 50 18.693 26.171 42.783 1.00 66.53 P
ATOM 3 OP1 U B 50 17.424 25.860 43.480 1.00 66.55 O
ATOM 4 OP2 U B 50 18.993 25.533 41.484 1.00 66.83 O
ATOM 5 O5' U B 50 18.785 27.754 42.572 1.00 64.45 O
ATOM 6 C5' U B 50 20.023 28.432 42.382 1.00 61.25 C
ATOM 7 C4' U B 50 19.877 29.921 42.673 1.00 59.22 C
ATOM 8 O4' U B 50 18.785 30.505 41.914 1.00 58.32 O
ATOM 9 C3' U B 50 19.588 30.306 44.119 1.00 58.45 C
ATOM 10 O3' U B 50 20.142 31.595 44.393 1.00 58.47 O
ATOM 11 C2' U B 50 18.059 30.337 44.138 1.00 57.55 C
ATOM 12 O2' U B 50 17.542 31.103 45.207 1.00 57.05 O
ATOM 13 C1' U B 50 17.768 30.979 42.781 1.00 57.10 C
ATOM 14 N1 U B 50 16.431 30.651 42.164 1.00 56.13 N
ATOM 15 C2 U B 50 15.377 31.557 42.233 1.00 55.58 C
ATOM 16 O2 U B 50 15.425 32.642 42.787 1.00 55.34 O
ATOM 17 N3 U B 50 14.219 31.137 41.629 1.00 55.07 N
ATOM 18 C4 U B 50 14.003 29.943 40.967 1.00 55.21 C
ATOM 19 O4 U B 50 12.905 29.716 40.472 1.00 55.40 O
ATOM 20 C5 U B 50 15.137 29.055 40.923 1.00 55.16 C
ATOM 21 C6 U B 50 16.279 29.438 41.508 1.00 55.63 C
ATOM 22 P C B 51 21.691 31.820 44.731 1.00 58.50 P
ATOM 23 OP1 C B 51 21.800 33.170 45.332 1.00 58.61 O
ATOM 24 OP2 C B 51 22.510 31.499 43.543 1.00 58.19 O
ATOM 25 O5' C B 51 21.977 30.707 45.846 1.00 59.15 O
TER

Atoms:
OP1: (4.874,37.207,47.170)
OP2: (7.412,37.173,47.390)
C3': (5.987,33.441,44.309)
C1': (7.081,33.948,42.311)
C5': (5.119,35.841,44.652)
O4': (6.286,35.057,42.673)
C8: (8.937,35.272,43.416)
O2': (5.453,32.168,42.286)
C6: (11.924,33.577,42.683)
C5: (10.653,34.147,42.897)
C4: (9.578,33.491,42.331)
P: (6.206,37.292,46.529)
C4': (5.349,34.677,43.708)
C2': (6.490,32.756,43.046)
C2: (10.867,31.918,41.463)
N1: (11.997,32.448,41.949)
N3: (9.618,32.364,41.599)
N6: (13.053,34.093,43.165)
N7: (10.236,35.273,43.578)
N9: (8.470,34.227,42.672)
O5': (6.295,36.215,45.343)
O3': (5.027,32.655,44.998)
C4: (14.003,29.943,40.967)
N3: (14.219,31.137,41.629)
OP1: (17.424,25.860,43.480)
OP2: (18.993,25.533,41.484)
C2: (15.377,31.557,42.233)
C1': (17.768,30.979,42.781)
C3': (19.588,30.306,44.119)
O5': (18.785,27.754,42.572)
O4': (18.785,30.505,41.914)
C5': (20.023,28.432,42.382)
P: (18.693,26.171,42.783)
C4': (19.877,29.921,42.673)
C2': (18.059,30.337,44.138)
O2': (17.542,31.103,45.207)
N1: (16.431,30.651,42.164)
O4: (12.905,29.716,40.472)
O2: (15.425,32.642,42.787)
C6: (16.279,29.438,41.508)
C5: (15.137,29.055,40.923)
O3': (20.142,31.595,44.393)
Image (generated by PyMOL):
PyMOL image
show in jmol