ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A844:A805

Extra

PDB:
ATOM 1 O3' U A 843 158.744 120.868 -38.918 1.00 28.53 O
ATOM 2 P A A 844 157.585 120.310 -37.968 1.00 28.45 P
ATOM 3 OP1 A A 844 157.757 118.841 -37.855 1.00 25.10 O
ATOM 4 OP2 A A 844 156.318 120.878 -38.477 1.00 29.54 O
ATOM 5 O5' A A 844 157.911 120.953 -36.551 1.00 28.87 O
ATOM 6 C5' A A 844 159.188 120.760 -35.954 1.00 27.47 C
ATOM 7 C4' A A 844 159.054 120.494 -34.478 1.00 27.51 C
ATOM 8 O4' A A 844 158.792 121.729 -33.757 1.00 27.99 O
ATOM 9 C3' A A 844 157.987 119.492 -34.026 1.00 28.12 C
ATOM 10 O3' A A 844 158.527 118.718 -32.952 1.00 28.24 O
ATOM 11 C2' A A 844 156.944 120.399 -33.370 1.00 28.24 C
ATOM 12 O2' A A 844 156.211 119.793 -32.317 1.00 30.10 O
ATOM 13 C1' A A 844 157.859 121.445 -32.750 1.00 28.34 C
ATOM 14 N9 A A 844 157.225 122.664 -32.262 1.00 28.02 N
ATOM 15 C8 A A 844 157.509 123.275 -31.070 1.00 26.95 C
ATOM 16 N7 A A 844 156.755 124.310 -30.817 1.00 28.76 N
ATOM 17 C5 A A 844 155.928 124.398 -31.928 1.00 26.26 C
ATOM 18 C6 A A 844 154.903 125.276 -32.253 1.00 25.89 C
ATOM 19 N6 A A 844 154.515 126.266 -31.453 1.00 29.03 N
ATOM 20 N1 A A 844 154.275 125.106 -33.430 1.00 25.99 N
ATOM 21 C2 A A 844 154.668 124.103 -34.221 1.00 29.02 C
ATOM 22 N3 A A 844 155.622 123.197 -34.020 1.00 28.81 N
ATOM 23 C4 A A 844 156.219 123.403 -32.835 1.00 27.48 C
ATOM 24 P A A 845 159.086 117.240 -33.217 1.00 26.50 P
ATOM 25 OP1 A A 845 160.364 117.397 -33.952 1.00 29.74 O
ATOM 26 OP2 A A 845 158.026 116.394 -33.815 1.00 26.30 O
ATOM 27 O5' A A 845 159.427 116.764 -31.746 1.00 24.24 O
TER

ATOM 1 O3' C B 804 144.936 128.721 -34.806 1.00 30.61 O
ATOM 2 P U B 805 145.898 129.921 -35.276 1.00 31.60 P
ATOM 3 OP1 U B 805 145.103 131.176 -35.109 1.00 32.12 O
ATOM 4 OP2 U B 805 146.463 129.597 -36.607 1.00 32.58 O
ATOM 5 O5' U B 805 147.049 129.925 -34.192 1.00 29.31 O
ATOM 6 C5' U B 805 146.823 130.548 -32.928 1.00 30.07 C
ATOM 7 C4' U B 805 148.011 130.369 -32.027 1.00 31.20 C
ATOM 8 O4' U B 805 148.304 128.957 -31.915 1.00 30.83 O
ATOM 9 C3' U B 805 149.329 130.996 -32.451 1.00 32.60 C
ATOM 10 O3' U B 805 149.408 132.344 -32.038 1.00 35.49 O
ATOM 11 C2' U B 805 150.328 130.154 -31.668 1.00 32.22 C
ATOM 12 O2' U B 805 150.332 130.508 -30.296 1.00 32.39 O
ATOM 13 C1' U B 805 149.695 128.771 -31.754 1.00 30.20 C
ATOM 14 N1 U B 805 150.198 127.969 -32.882 1.00 28.35 N
ATOM 15 C2 U B 805 151.449 127.418 -32.765 1.00 27.46 C
ATOM 16 O2 U B 805 152.170 127.626 -31.802 1.00 29.67 O
ATOM 17 N3 U B 805 151.833 126.628 -33.818 1.00 25.47 N
ATOM 18 C4 U B 805 151.111 126.365 -34.962 1.00 25.76 C
ATOM 19 O4 U B 805 151.588 125.640 -35.836 1.00 26.66 O
ATOM 20 C5 U B 805 149.846 126.999 -35.019 1.00 26.13 C
ATOM 21 C6 U B 805 149.441 127.759 -34.007 1.00 28.18 C
ATOM 22 P A B 806 149.652 133.507 -33.123 1.00 36.98 P
ATOM 23 OP1 A B 806 149.871 134.751 -32.296 1.00 36.52 O
ATOM 24 OP2 A B 806 148.559 133.452 -34.129 1.00 36.07 O
ATOM 25 O5' A B 806 151.021 133.137 -33.854 1.00 37.67 O
TER

Atoms:
OP1: (157.757,118.841,-37.855)
OP2: (156.318,120.878,-38.477)
C3': (157.987,119.492,-34.026)
C1': (157.859,121.445,-32.750)
C5': (159.188,120.760,-35.954)
O4': (158.792,121.729,-33.757)
C8: (157.509,123.275,-31.070)
O2': (156.211,119.793,-32.317)
C6: (154.903,125.276,-32.253)
C5: (155.928,124.398,-31.928)
C4: (156.219,123.403,-32.835)
P: (157.585,120.310,-37.968)
C4': (159.054,120.494,-34.478)
C2': (156.944,120.399,-33.370)
C2: (154.668,124.103,-34.221)
N1: (154.275,125.106,-33.430)
N3: (155.622,123.197,-34.020)
N6: (154.515,126.266,-31.453)
N7: (156.755,124.310,-30.817)
N9: (157.225,122.664,-32.262)
O5': (157.911,120.953,-36.551)
O3': (158.527,118.718,-32.952)
C4: (151.111,126.365,-34.962)
N3: (151.833,126.628,-33.818)
OP1: (145.103,131.176,-35.109)
OP2: (146.463,129.597,-36.607)
C2: (151.449,127.418,-32.765)
C1': (149.695,128.771,-31.754)
C3': (149.329,130.996,-32.451)
O5': (147.049,129.925,-34.192)
O4': (148.304,128.957,-31.915)
C5': (146.823,130.548,-32.928)
P: (145.898,129.921,-35.276)
C4': (148.011,130.369,-32.027)
C2': (150.328,130.154,-31.668)
O2': (150.332,130.508,-30.296)
N1: (150.198,127.969,-32.882)
O4: (151.588,125.640,-35.836)
O2: (152.170,127.626,-31.802)
C6: (149.441,127.759,-34.007)
C5: (149.846,126.999,-35.019)
O3': (149.408,132.344,-32.038)
Image (generated by PyMOL):
PyMOL image
show in jmol