ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MMS:D22:D18

Extra

PDB:
ATOM 1 O3' C A 21 7.216 -6.295 -39.352 1.00 27.21 O
ATOM 2 P A A 22 6.502 -6.360 -37.915 1.00 37.37 P
ATOM 3 OP1 A A 22 5.328 -7.287 -37.972 1.00 26.29 O
ATOM 4 OP2 A A 22 6.300 -4.954 -37.487 1.00 30.80 O
ATOM 5 O5' A A 22 7.614 -6.996 -36.980 1.00 33.33 O
ATOM 6 C5' A A 22 8.842 -6.293 -36.711 1.00 45.87 C
ATOM 7 C4' A A 22 9.614 -7.024 -35.651 1.00 39.23 C
ATOM 8 O4' A A 22 8.804 -7.060 -34.451 1.00 42.33 O
ATOM 9 C3' A A 22 9.847 -8.484 -35.996 1.00 42.31 C
ATOM 10 O3' A A 22 11.022 -8.666 -36.753 1.00 46.57 O
ATOM 11 C2' A A 22 9.902 -9.161 -34.638 1.00 40.15 C
ATOM 12 O2' A A 22 11.169 -9.047 -34.018 1.00 50.42 O
ATOM 13 C1' A A 22 8.866 -8.350 -33.866 1.00 29.91 C
ATOM 14 N9 A A 22 7.532 -8.935 -33.963 1.00 24.96 N
ATOM 15 C8 A A 22 6.453 -8.438 -34.648 1.00 25.01 C
ATOM 16 N7 A A 22 5.373 -9.170 -34.534 1.00 31.09 N
ATOM 17 C5 A A 22 5.770 -10.224 -33.727 1.00 16.48 C
ATOM 18 C6 A A 22 5.085 -11.338 -33.237 1.00 25.59 C
ATOM 19 N6 A A 22 3.804 -11.589 -33.504 1.00 28.23 N
ATOM 20 N1 A A 22 5.765 -12.201 -32.456 1.00 25.23 N
ATOM 21 C2 A A 22 7.053 -11.951 -32.200 1.00 27.30 C
ATOM 22 N3 A A 22 7.811 -10.937 -32.608 1.00 31.09 N
ATOM 23 C4 A A 22 7.099 -10.097 -33.375 1.00 27.01 C
ATOM 24 P G A 23 11.030 -9.753 -37.924 1.00 43.98 P
ATOM 25 OP1 G A 23 12.435 -9.917 -38.384 1.00 36.10 O
ATOM 26 OP2 G A 23 9.978 -9.343 -38.892 1.00 47.14 O
ATOM 27 O5' G A 23 10.556 -11.084 -37.192 1.00 30.43 O
TER

ATOM 1 O3' G B 17 -3.874 -7.194 -31.893 1.00 38.73 O
ATOM 2 P A B 18 -3.995 -8.447 -32.902 1.00 27.21 P
ATOM 3 OP1 A B 18 -5.070 -8.102 -33.864 1.00 29.02 O
ATOM 4 OP2 A B 18 -4.082 -9.718 -32.124 1.00 34.28 O
ATOM 5 O5' A B 18 -2.601 -8.445 -33.661 1.00 13.61 O
ATOM 6 C5' A B 18 -2.231 -7.337 -34.472 1.00 12.04 C
ATOM 7 C4' A B 18 -0.867 -7.557 -35.055 1.00 21.87 C
ATOM 8 O4' A B 18 0.149 -7.322 -34.046 1.00 32.63 O
ATOM 9 C3' A B 18 -0.590 -8.954 -35.628 1.00 35.90 C
ATOM 10 O3' A B 18 0.162 -8.819 -36.833 1.00 43.63 O
ATOM 11 C2' A B 18 0.352 -9.560 -34.592 1.00 35.57 C
ATOM 12 O2' A B 18 1.241 -10.526 -35.127 1.00 44.23 O
ATOM 13 C1' A B 18 1.127 -8.311 -34.199 1.00 42.00 C
ATOM 14 N9 A B 18 2.031 -8.358 -33.054 1.00 38.32 N
ATOM 15 C8 A B 18 2.071 -9.207 -31.976 1.00 30.76 C
ATOM 16 N7 A B 18 3.141 -9.059 -31.233 1.00 35.91 N
ATOM 17 C5 A B 18 3.827 -8.017 -31.841 1.00 33.30 C
ATOM 18 C6 A B 18 5.053 -7.392 -31.552 1.00 39.74 C
ATOM 19 N6 A B 18 5.850 -7.751 -30.540 1.00 50.68 N
ATOM 20 N1 A B 18 5.443 -6.375 -32.353 1.00 41.06 N
ATOM 21 C2 A B 18 4.649 -6.022 -33.371 1.00 43.25 C
ATOM 22 N3 A B 18 3.483 -6.540 -33.747 1.00 36.03 N
ATOM 23 C4 A B 18 3.131 -7.548 -32.935 1.00 31.57 C
ATOM 24 P A B 19 -0.353 -9.514 -38.183 1.00 39.29 P
ATOM 25 OP1 A B 19 -1.128 -10.747 -37.873 1.00 27.46 O
ATOM 26 OP2 A B 19 0.847 -9.589 -39.057 1.00 23.58 O
ATOM 27 O5' A B 19 -1.376 -8.452 -38.783 1.00 32.87 O
TER

Atoms:
OP1: (5.328,-7.287,-37.972)
OP2: (6.300,-4.954,-37.487)
C3': (9.847,-8.484,-35.996)
C1': (8.866,-8.350,-33.866)
C5': (8.842,-6.293,-36.711)
O4': (8.804,-7.060,-34.451)
C8: (6.453,-8.438,-34.648)
O2': (11.169,-9.047,-34.018)
C6: (5.085,-11.338,-33.237)
C5: (5.770,-10.224,-33.727)
C4: (7.099,-10.097,-33.375)
P: (6.502,-6.360,-37.915)
C4': (9.614,-7.024,-35.651)
C2': (9.902,-9.161,-34.638)
C2: (7.053,-11.951,-32.200)
N1: (5.765,-12.201,-32.456)
N3: (7.811,-10.937,-32.608)
N6: (3.804,-11.589,-33.504)
N7: (5.373,-9.170,-34.534)
N9: (7.532,-8.935,-33.963)
O5': (7.614,-6.996,-36.980)
O3': (11.022,-8.666,-36.753)
OP1: (-5.070,-8.102,-33.864)
OP2: (-4.082,-9.718,-32.124)
C3': (-0.590,-8.954,-35.628)
C1': (1.127,-8.311,-34.199)
C5': (-2.231,-7.337,-34.472)
O4': (0.149,-7.322,-34.046)
C8: (2.071,-9.207,-31.976)
O2': (1.241,-10.526,-35.127)
C6: (5.053,-7.392,-31.552)
C5: (3.827,-8.017,-31.841)
C4: (3.131,-7.548,-32.935)
P: (-3.995,-8.447,-32.902)
C4': (-0.867,-7.557,-35.055)
C2': (0.352,-9.560,-34.592)
C2: (4.649,-6.022,-33.371)
N1: (5.443,-6.375,-32.353)
N3: (3.483,-6.540,-33.747)
N6: (5.850,-7.751,-30.540)
N7: (3.141,-9.059,-31.233)
N9: (2.031,-8.358,-33.054)
O5': (-2.601,-8.445,-33.661)
O3': (0.162,-8.819,-36.833)
Image (generated by PyMOL):
PyMOL image
show in jmol