ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01943:01942

Extra

PDB:
ATOM 1 O3' U A1942 92.952 123.796 117.553 1.00 44.62 O
ATOM 2 P A A1943 94.374 124.381 117.086 1.00 44.57 P
ATOM 3 OP1 A A1943 94.754 123.671 115.844 1.00 47.71 O
ATOM 4 OP2 A A1943 95.292 124.368 118.242 1.00 46.32 O
ATOM 5 O5' A A1943 94.068 125.897 116.709 1.00 45.86 O
ATOM 6 C5' A A1943 93.091 126.226 115.712 1.00 43.98 C
ATOM 7 C4' A A1943 93.094 127.708 115.454 1.00 45.75 C
ATOM 8 O4' A A1943 92.740 128.418 116.672 1.00 45.71 O
ATOM 9 C3' A A1943 94.438 128.302 115.078 1.00 46.52 C
ATOM 10 O3' A A1943 94.725 128.112 113.704 1.00 47.04 O
ATOM 11 C2' A A1943 94.248 129.772 115.422 1.00 46.38 C
ATOM 12 O2' A A1943 93.526 130.486 114.444 1.00 47.75 O
ATOM 13 C1' A A1943 93.402 129.676 116.694 1.00 45.19 C
ATOM 14 N9 A A1943 94.200 129.782 117.917 1.00 46.00 N
ATOM 15 C8 A A1943 94.364 128.859 118.921 1.00 45.44 C
ATOM 16 N7 A A1943 95.156 129.261 119.881 1.00 45.26 N
ATOM 17 C5 A A1943 95.539 130.536 119.487 1.00 45.39 C
ATOM 18 C6 A A1943 96.389 131.490 120.071 1.00 46.14 C
ATOM 19 N6 A A1943 97.021 131.305 121.233 1.00 48.44 N
ATOM 20 N1 A A1943 96.572 132.654 119.415 1.00 44.45 N
ATOM 21 C2 A A1943 95.936 132.838 118.253 1.00 45.65 C
ATOM 22 N3 A A1943 95.114 132.019 117.604 1.00 44.67 N
ATOM 23 C4 A A1943 94.956 130.870 118.283 1.00 44.81 C
ATOM 24 P G A1944 96.225 127.764 113.249 1.00 48.66 P
ATOM 25 OP1 G A1944 96.256 127.734 111.758 1.00 48.55 O
ATOM 26 OP2 G A1944 96.682 126.573 114.022 1.00 46.64 O
ATOM 27 O5' G A1944 97.070 129.023 113.731 1.00 46.11 O
TER

ATOM 1 O3' G B1941 93.239 127.497 122.646 1.00 42.65 O
ATOM 2 P U B1942 93.979 126.102 122.356 1.00 46.75 P
ATOM 3 OP1 U B1942 93.602 125.113 123.402 1.00 43.48 O
ATOM 4 OP2 U B1942 95.411 126.390 122.098 1.00 42.88 O
ATOM 5 O5' U B1942 93.311 125.622 120.996 1.00 46.13 O
ATOM 6 C5' U B1942 92.119 124.821 120.994 1.00 43.20 C
ATOM 7 C4' U B1942 92.153 123.879 119.818 1.00 42.66 C
ATOM 8 O4' U B1942 90.993 123.010 119.852 1.00 41.51 O
ATOM 9 C3' U B1942 92.140 124.550 118.449 1.00 42.93 C
ATOM 10 O3' U B1942 92.952 123.796 117.553 1.00 44.62 O
ATOM 11 C2' U B1942 90.674 124.446 118.046 1.00 41.77 C
ATOM 12 O2' U B1942 90.486 124.467 116.646 1.00 41.58 O
ATOM 13 C1' U B1942 90.319 123.082 118.620 1.00 41.30 C
ATOM 14 N1 U B1942 88.897 122.814 118.857 1.00 43.04 N
ATOM 15 C2 U B1942 88.379 121.646 118.325 1.00 45.77 C
ATOM 16 O2 U B1942 89.047 120.868 117.663 1.00 45.83 O
ATOM 17 N3 U B1942 87.052 121.422 118.598 1.00 46.00 N
ATOM 18 C4 U B1942 86.210 122.237 119.333 1.00 46.79 C
ATOM 19 O4 U B1942 85.038 121.901 119.503 1.00 48.22 O
ATOM 20 C5 U B1942 86.821 123.429 119.836 1.00 45.12 C
ATOM 21 C6 U B1942 88.109 123.670 119.586 1.00 44.52 C
ATOM 22 P A B1943 94.374 124.381 117.086 1.00 44.57 P
ATOM 23 OP1 A B1943 94.754 123.671 115.844 1.00 47.71 O
ATOM 24 OP2 A B1943 95.292 124.368 118.242 1.00 46.32 O
ATOM 25 O5' A B1943 94.068 125.897 116.709 1.00 45.86 O
TER

Atoms:
OP1: (94.754,123.671,115.844)
OP2: (95.292,124.368,118.242)
C3': (94.438,128.302,115.078)
C1': (93.402,129.676,116.694)
C5': (93.091,126.226,115.712)
O4': (92.740,128.418,116.672)
C8: (94.364,128.859,118.921)
O2': (93.526,130.486,114.444)
C6: (96.389,131.490,120.071)
C5: (95.539,130.536,119.487)
C4: (94.956,130.870,118.283)
P: (94.374,124.381,117.086)
C4': (93.094,127.708,115.454)
C2': (94.248,129.772,115.422)
C2: (95.936,132.838,118.253)
N1: (96.572,132.654,119.415)
N3: (95.114,132.019,117.604)
N6: (97.021,131.305,121.233)
N7: (95.156,129.261,119.881)
N9: (94.200,129.782,117.917)
O5': (94.068,125.897,116.709)
O3': (94.725,128.112,113.704)
C4: (86.210,122.237,119.333)
N3: (87.052,121.422,118.598)
OP1: (93.602,125.113,123.402)
OP2: (95.411,126.390,122.098)
C2: (88.379,121.646,118.325)
C1': (90.319,123.082,118.620)
C3': (92.140,124.550,118.449)
O5': (93.311,125.622,120.996)
O4': (90.993,123.010,119.852)
C5': (92.119,124.821,120.994)
P: (93.979,126.102,122.356)
C4': (92.153,123.879,119.818)
C2': (90.674,124.446,118.046)
O2': (90.486,124.467,116.646)
N1: (88.897,122.814,118.857)
O4: (85.038,121.901,119.503)
O2: (89.047,120.868,117.663)
C6: (88.109,123.670,119.586)
C5: (86.821,123.429,119.836)
O3': (92.952,123.796,117.553)
Image (generated by PyMOL):
PyMOL image
show in jmol