Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01133:01159
Extra
PDB:
ATOM 1 O3' A A1132 77.551 83.246 183.869 1.00149.36 O
ATOM 2 P A A1133 77.344 81.681 183.557 1.00148.83 P
ATOM 3 OP1 A A1133 78.266 80.919 184.439 1.00148.81 O
ATOM 4 OP2 A A1133 77.387 81.461 182.086 1.00148.71 O
ATOM 5 O5' A A1133 75.853 81.428 184.057 1.00148.12 O
ATOM 6 C5' A A1133 74.797 82.357 183.728 1.00146.71 C
ATOM 7 C4' A A1133 74.198 82.942 184.988 1.00145.68 C
ATOM 8 O4' A A1133 75.185 83.748 185.674 1.00145.39 O
ATOM 9 C3' A A1133 73.074 83.944 184.776 1.00145.01 C
ATOM 10 O3' A A1133 71.856 83.241 184.529 1.00142.91 O
ATOM 11 C2' A A1133 73.042 84.698 186.107 1.00145.51 C
ATOM 12 O2' A A1133 72.254 84.060 187.088 1.00146.45 O
ATOM 13 C1' A A1133 74.512 84.647 186.538 1.00145.77 C
ATOM 14 N9 A A1133 75.209 85.933 186.543 1.00146.14 N
ATOM 15 C8 A A1133 76.002 86.489 185.568 1.00146.46 C
ATOM 16 N7 A A1133 76.504 87.655 185.899 1.00146.53 N
ATOM 17 C5 A A1133 76.004 87.885 187.173 1.00146.40 C
ATOM 18 C6 A A1133 76.167 88.951 188.076 1.00146.26 C
ATOM 19 N6 A A1133 76.916 90.026 187.824 1.00146.72 N
ATOM 20 N1 A A1133 75.527 88.872 189.264 1.00146.14 N
ATOM 21 C2 A A1133 74.778 87.793 189.517 1.00146.11 C
ATOM 22 N3 A A1133 74.549 86.728 188.752 1.00146.10 N
ATOM 23 C4 A A1133 75.199 86.837 187.580 1.00146.37 C
ATOM 24 P G A1134 70.459 84.034 184.467 1.00140.92 P
ATOM 25 OP1 G A1134 70.730 85.473 184.209 1.00141.36 O
ATOM 26 OP2 G A1134 69.679 83.639 185.670 1.00140.21 O
ATOM 27 O5' G A1134 69.737 83.419 183.186 1.00140.13 O
TER
ATOM 1 O3' A B1158 79.507 93.618 179.204 1.00136.48 O
ATOM 2 P A B1159 78.062 92.914 179.135 1.00136.95 P
ATOM 3 OP1 A B1159 78.095 91.957 177.998 1.00136.96 O
ATOM 4 OP2 A B1159 77.028 93.978 179.167 1.00136.85 O
ATOM 5 O5' A B1159 77.961 92.086 180.494 1.00136.85 O
ATOM 6 C5' A B1159 78.761 90.907 180.705 1.00136.89 C
ATOM 7 C4' A B1159 78.802 90.556 182.176 1.00137.17 C
ATOM 8 O4' A B1159 79.405 91.654 182.916 1.00136.70 O
ATOM 9 C3' A B1159 77.458 90.358 182.857 1.00137.33 C
ATOM 10 O3' A B1159 76.899 89.069 182.633 1.00137.56 O
ATOM 11 C2' A B1159 77.805 90.605 184.320 1.00136.86 C
ATOM 12 O2' A B1159 78.441 89.504 184.939 1.00136.41 O
ATOM 13 C1' A B1159 78.791 91.767 184.193 1.00136.33 C
ATOM 14 N9 A B1159 78.117 93.064 184.266 1.00135.72 N
ATOM 15 C8 A B1159 77.767 93.894 183.227 1.00135.40 C
ATOM 16 N7 A B1159 77.155 94.987 183.609 1.00135.41 N
ATOM 17 C5 A B1159 77.100 94.874 184.991 1.00135.43 C
ATOM 18 C6 A B1159 76.578 95.716 185.987 1.00135.45 C
ATOM 19 N6 A B1159 75.986 96.886 185.733 1.00135.22 N
ATOM 20 N1 A B1159 76.689 95.311 187.272 1.00135.41 N
ATOM 21 C2 A B1159 77.287 94.141 187.525 1.00135.17 C
ATOM 22 N3 A B1159 77.818 93.265 186.676 1.00135.25 N
ATOM 23 C4 A B1159 77.692 93.696 185.409 1.00135.45 C
ATOM 24 P C B1160 75.313 88.858 182.788 1.00137.65 P
ATOM 25 OP1 C B1160 75.052 87.400 182.693 1.00137.98 O
ATOM 26 OP2 C B1160 74.633 89.789 181.853 1.00137.21 O
ATOM 27 O5' C B1160 75.019 89.327 184.282 1.00138.35 O
TER
ATOM 2 P A A1133 77.344 81.681 183.557 1.00148.83 P
ATOM 3 OP1 A A1133 78.266 80.919 184.439 1.00148.81 O
ATOM 4 OP2 A A1133 77.387 81.461 182.086 1.00148.71 O
ATOM 5 O5' A A1133 75.853 81.428 184.057 1.00148.12 O
ATOM 6 C5' A A1133 74.797 82.357 183.728 1.00146.71 C
ATOM 7 C4' A A1133 74.198 82.942 184.988 1.00145.68 C
ATOM 8 O4' A A1133 75.185 83.748 185.674 1.00145.39 O
ATOM 9 C3' A A1133 73.074 83.944 184.776 1.00145.01 C
ATOM 10 O3' A A1133 71.856 83.241 184.529 1.00142.91 O
ATOM 11 C2' A A1133 73.042 84.698 186.107 1.00145.51 C
ATOM 12 O2' A A1133 72.254 84.060 187.088 1.00146.45 O
ATOM 13 C1' A A1133 74.512 84.647 186.538 1.00145.77 C
ATOM 14 N9 A A1133 75.209 85.933 186.543 1.00146.14 N
ATOM 15 C8 A A1133 76.002 86.489 185.568 1.00146.46 C
ATOM 16 N7 A A1133 76.504 87.655 185.899 1.00146.53 N
ATOM 17 C5 A A1133 76.004 87.885 187.173 1.00146.40 C
ATOM 18 C6 A A1133 76.167 88.951 188.076 1.00146.26 C
ATOM 19 N6 A A1133 76.916 90.026 187.824 1.00146.72 N
ATOM 20 N1 A A1133 75.527 88.872 189.264 1.00146.14 N
ATOM 21 C2 A A1133 74.778 87.793 189.517 1.00146.11 C
ATOM 22 N3 A A1133 74.549 86.728 188.752 1.00146.10 N
ATOM 23 C4 A A1133 75.199 86.837 187.580 1.00146.37 C
ATOM 24 P G A1134 70.459 84.034 184.467 1.00140.92 P
ATOM 25 OP1 G A1134 70.730 85.473 184.209 1.00141.36 O
ATOM 26 OP2 G A1134 69.679 83.639 185.670 1.00140.21 O
ATOM 27 O5' G A1134 69.737 83.419 183.186 1.00140.13 O
TER
ATOM 1 O3' A B1158 79.507 93.618 179.204 1.00136.48 O
ATOM 2 P A B1159 78.062 92.914 179.135 1.00136.95 P
ATOM 3 OP1 A B1159 78.095 91.957 177.998 1.00136.96 O
ATOM 4 OP2 A B1159 77.028 93.978 179.167 1.00136.85 O
ATOM 5 O5' A B1159 77.961 92.086 180.494 1.00136.85 O
ATOM 6 C5' A B1159 78.761 90.907 180.705 1.00136.89 C
ATOM 7 C4' A B1159 78.802 90.556 182.176 1.00137.17 C
ATOM 8 O4' A B1159 79.405 91.654 182.916 1.00136.70 O
ATOM 9 C3' A B1159 77.458 90.358 182.857 1.00137.33 C
ATOM 10 O3' A B1159 76.899 89.069 182.633 1.00137.56 O
ATOM 11 C2' A B1159 77.805 90.605 184.320 1.00136.86 C
ATOM 12 O2' A B1159 78.441 89.504 184.939 1.00136.41 O
ATOM 13 C1' A B1159 78.791 91.767 184.193 1.00136.33 C
ATOM 14 N9 A B1159 78.117 93.064 184.266 1.00135.72 N
ATOM 15 C8 A B1159 77.767 93.894 183.227 1.00135.40 C
ATOM 16 N7 A B1159 77.155 94.987 183.609 1.00135.41 N
ATOM 17 C5 A B1159 77.100 94.874 184.991 1.00135.43 C
ATOM 18 C6 A B1159 76.578 95.716 185.987 1.00135.45 C
ATOM 19 N6 A B1159 75.986 96.886 185.733 1.00135.22 N
ATOM 20 N1 A B1159 76.689 95.311 187.272 1.00135.41 N
ATOM 21 C2 A B1159 77.287 94.141 187.525 1.00135.17 C
ATOM 22 N3 A B1159 77.818 93.265 186.676 1.00135.25 N
ATOM 23 C4 A B1159 77.692 93.696 185.409 1.00135.45 C
ATOM 24 P C B1160 75.313 88.858 182.788 1.00137.65 P
ATOM 25 OP1 C B1160 75.052 87.400 182.693 1.00137.98 O
ATOM 26 OP2 C B1160 74.633 89.789 181.853 1.00137.21 O
ATOM 27 O5' C B1160 75.019 89.327 184.282 1.00138.35 O
TER
Atoms:
OP1: (78.266,80.919,184.439)
OP2: (77.387,81.461,182.086)
C3': (73.074,83.944,184.776)
C1': (74.512,84.647,186.538)
C5': (74.797,82.357,183.728)
O4': (75.185,83.748,185.674)
C8: (76.002,86.489,185.568)
O2': (72.254,84.060,187.088)
C6: (76.167,88.951,188.076)
C5: (76.004,87.885,187.173)
C4: (75.199,86.837,187.580)
P: (77.344,81.681,183.557)
C4': (74.198,82.942,184.988)
C2': (73.042,84.698,186.107)
C2: (74.778,87.793,189.517)
N1: (75.527,88.872,189.264)
N3: (74.549,86.728,188.752)
N6: (76.916,90.026,187.824)
N7: (76.504,87.655,185.899)
N9: (75.209,85.933,186.543)
O5': (75.853,81.428,184.057)
O3': (71.856,83.241,184.529)
OP2: (77.387,81.461,182.086)
C3': (73.074,83.944,184.776)
C1': (74.512,84.647,186.538)
C5': (74.797,82.357,183.728)
O4': (75.185,83.748,185.674)
C8: (76.002,86.489,185.568)
O2': (72.254,84.060,187.088)
C6: (76.167,88.951,188.076)
C5: (76.004,87.885,187.173)
C4: (75.199,86.837,187.580)
P: (77.344,81.681,183.557)
C4': (74.198,82.942,184.988)
C2': (73.042,84.698,186.107)
C2: (74.778,87.793,189.517)
N1: (75.527,88.872,189.264)
N3: (74.549,86.728,188.752)
N6: (76.916,90.026,187.824)
N7: (76.504,87.655,185.899)
N9: (75.209,85.933,186.543)
O5': (75.853,81.428,184.057)
O3': (71.856,83.241,184.529)
OP1: (78.095,91.957,177.998)
OP2: (77.028,93.978,179.167)
C3': (77.458,90.358,182.857)
C1': (78.791,91.767,184.193)
C5': (78.761,90.907,180.705)
O4': (79.405,91.654,182.916)
C8: (77.767,93.894,183.227)
O2': (78.441,89.504,184.939)
C6: (76.578,95.716,185.987)
C5: (77.100,94.874,184.991)
C4: (77.692,93.696,185.409)
P: (78.062,92.914,179.135)
C4': (78.802,90.556,182.176)
C2': (77.805,90.605,184.320)
C2: (77.287,94.141,187.525)
N1: (76.689,95.311,187.272)
N3: (77.818,93.265,186.676)
N6: (75.986,96.886,185.733)
N7: (77.155,94.987,183.609)
N9: (78.117,93.064,184.266)
O5': (77.961,92.086,180.494)
O3': (76.899,89.069,182.633)
OP2: (77.028,93.978,179.167)
C3': (77.458,90.358,182.857)
C1': (78.791,91.767,184.193)
C5': (78.761,90.907,180.705)
O4': (79.405,91.654,182.916)
C8: (77.767,93.894,183.227)
O2': (78.441,89.504,184.939)
C6: (76.578,95.716,185.987)
C5: (77.100,94.874,184.991)
C4: (77.692,93.696,185.409)
P: (78.062,92.914,179.135)
C4': (78.802,90.556,182.176)
C2': (77.805,90.605,184.320)
C2: (77.287,94.141,187.525)
N1: (76.689,95.311,187.272)
N3: (77.818,93.265,186.676)
N6: (75.986,96.886,185.733)
N7: (77.155,94.987,183.609)
N9: (78.117,93.064,184.266)
O5': (77.961,92.086,180.494)
O3': (76.899,89.069,182.633)
Image (generated by PyMOL):