ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A359:A357

Extra

PDB:
ATOM 1 O3' A A 358 30.463 -78.170 -85.677 1.00 71.39 O
ATOM 2 P A A 359 31.332 -76.810 -85.652 1.00 77.68 P
ATOM 3 OP1 A A 359 30.512 -75.810 -86.383 1.00 82.42 O
ATOM 4 OP2 A A 359 32.736 -77.059 -86.082 1.00 77.91 O
ATOM 5 O5' A A 359 31.360 -76.389 -84.123 1.00 64.37 O
ATOM 6 C5' A A 359 30.232 -75.798 -83.516 1.00 59.26 C
ATOM 7 C4' A A 359 30.560 -75.429 -82.097 1.00 59.69 C
ATOM 8 O4' A A 359 30.782 -76.648 -81.354 1.00 64.05 O
ATOM 9 C3' A A 359 31.821 -74.601 -81.893 1.00 61.38 C
ATOM 10 O3' A A 359 31.545 -73.197 -81.997 1.00 67.56 O
ATOM 11 C2' A A 359 32.241 -74.984 -80.478 1.00 63.12 C
ATOM 12 O2' A A 359 31.525 -74.262 -79.501 1.00 66.26 O
ATOM 13 C1' A A 359 31.793 -76.442 -80.392 1.00 64.32 C
ATOM 14 N9 A A 359 32.864 -77.409 -80.626 1.00 67.80 N
ATOM 15 C8 A A 359 33.083 -78.205 -81.724 1.00 69.12 C
ATOM 16 N7 A A 359 34.129 -78.985 -81.610 1.00 74.93 N
ATOM 17 C5 A A 359 34.637 -78.677 -80.356 1.00 76.01 C
ATOM 18 C6 A A 359 35.752 -79.160 -79.638 1.00 74.57 C
ATOM 19 N6 A A 359 36.590 -80.085 -80.096 1.00 69.73 N
ATOM 20 N1 A A 359 35.976 -78.645 -78.413 1.00 74.91 N
ATOM 21 C2 A A 359 35.138 -77.704 -77.949 1.00 76.07 C
ATOM 22 N3 A A 359 34.064 -77.168 -78.528 1.00 71.32 N
ATOM 23 C4 A A 359 33.867 -77.706 -79.742 1.00 72.51 C
ATOM 24 P G A 360 32.675 -72.179 -82.542 1.00 67.97 P
ATOM 25 OP1 G A 360 32.075 -70.844 -82.807 1.00 61.92 O
ATOM 26 OP2 G A 360 33.407 -72.890 -83.630 1.00 68.28 O
ATOM 27 O5' G A 360 33.651 -72.005 -81.300 1.00 70.65 O
TER

ATOM 1 O3' G B 356 37.916 -87.787 -85.121 1.00 65.73 O
ATOM 2 P A B 357 38.081 -86.215 -85.323 1.00 54.34 P
ATOM 3 OP1 A B 357 37.519 -85.894 -86.663 1.00 55.99 O
ATOM 4 OP2 A B 357 39.490 -85.841 -85.013 1.00 55.82 O
ATOM 5 O5' A B 357 37.149 -85.578 -84.190 1.00 64.92 O
ATOM 6 C5' A B 357 35.754 -85.361 -84.415 1.00 63.61 C
ATOM 7 C4' A B 357 35.288 -84.095 -83.726 1.00 61.43 C
ATOM 8 O4' A B 357 35.521 -84.202 -82.300 1.00 61.47 O
ATOM 9 C3' A B 357 35.897 -82.765 -84.195 1.00 69.07 C
ATOM 10 O3' A B 357 34.886 -81.838 -84.538 1.00 74.39 O
ATOM 11 C2' A B 357 36.705 -82.263 -82.993 1.00 71.07 C
ATOM 12 O2' A B 357 36.530 -80.871 -82.770 1.00 81.42 O
ATOM 13 C1' A B 357 36.103 -83.012 -81.810 1.00 65.67 C
ATOM 14 N9 A B 357 37.133 -83.373 -80.833 1.00 63.10 N
ATOM 15 C8 A B 357 38.247 -84.151 -81.032 1.00 69.02 C
ATOM 16 N7 A B 357 38.967 -84.325 -79.952 1.00 68.54 N
ATOM 17 C5 A B 357 38.286 -83.614 -78.980 1.00 66.42 C
ATOM 18 C6 A B 357 38.523 -83.423 -77.615 1.00 70.45 C
ATOM 19 N6 A B 357 39.540 -83.960 -76.948 1.00 77.38 N
ATOM 20 N1 A B 357 37.656 -82.648 -76.934 1.00 72.89 N
ATOM 21 C2 A B 357 36.621 -82.115 -77.589 1.00 76.78 C
ATOM 22 N3 A B 357 36.285 -82.232 -78.864 1.00 74.40 N
ATOM 23 C4 A B 357 37.167 -83.005 -79.513 1.00 66.11 C
ATOM 24 P A B 358 34.120 -81.956 -85.953 1.00 72.10 P
ATOM 25 OP1 A B 358 33.988 -83.377 -86.406 1.00 70.39 O
ATOM 26 OP2 A B 358 34.715 -80.947 -86.857 1.00 74.31 O
ATOM 27 O5' A B 358 32.698 -81.441 -85.489 1.00 67.43 O
TER

Atoms:
OP1: (30.512,-75.810,-86.383)
OP2: (32.736,-77.059,-86.082)
C3': (31.821,-74.601,-81.893)
C1': (31.793,-76.442,-80.392)
C5': (30.232,-75.798,-83.516)
O4': (30.782,-76.648,-81.354)
C8: (33.083,-78.205,-81.724)
O2': (31.525,-74.262,-79.501)
C6: (35.752,-79.160,-79.638)
C5: (34.637,-78.677,-80.356)
C4: (33.867,-77.706,-79.742)
P: (31.332,-76.810,-85.652)
C4': (30.560,-75.429,-82.097)
C2': (32.241,-74.984,-80.478)
C2: (35.138,-77.704,-77.949)
N1: (35.976,-78.645,-78.413)
N3: (34.064,-77.168,-78.528)
N6: (36.590,-80.085,-80.096)
N7: (34.129,-78.985,-81.610)
N9: (32.864,-77.409,-80.626)
O5': (31.360,-76.389,-84.123)
O3': (31.545,-73.197,-81.997)
OP1: (37.519,-85.894,-86.663)
OP2: (39.490,-85.841,-85.013)
C3': (35.897,-82.765,-84.195)
C1': (36.103,-83.012,-81.810)
C5': (35.754,-85.361,-84.415)
O4': (35.521,-84.202,-82.300)
C8: (38.247,-84.151,-81.032)
O2': (36.530,-80.871,-82.770)
C6: (38.523,-83.423,-77.615)
C5: (38.286,-83.614,-78.980)
C4: (37.167,-83.005,-79.513)
P: (38.081,-86.215,-85.323)
C4': (35.288,-84.095,-83.726)
C2': (36.705,-82.263,-82.993)
C2: (36.621,-82.115,-77.589)
N1: (37.656,-82.648,-76.934)
N3: (36.285,-82.232,-78.864)
N6: (39.540,-83.960,-76.948)
N7: (38.967,-84.325,-79.952)
N9: (37.133,-83.373,-80.833)
O5': (37.149,-85.578,-84.190)
O3': (34.886,-81.838,-84.538)
Image (generated by PyMOL):
PyMOL image
show in jmol