Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2464:A2469
Extra
PDB:
ATOM 1 O3' G A2463 -118.267 -43.078 -37.669 1.00 1.79 O
ATOM 2 P A A2464 -117.600 -42.794 -39.115 1.00 12.94 P
ATOM 3 OP1 A A2464 -117.970 -41.423 -39.501 1.00 12.94 O
ATOM 4 OP2 A A2464 -117.989 -43.904 -40.026 1.00 12.94 O
ATOM 5 O5' A A2464 -116.042 -42.841 -38.803 1.00 12.94 O
ATOM 6 C5' A A2464 -115.388 -41.694 -38.292 1.00 12.94 C
ATOM 7 C4' A A2464 -113.903 -41.878 -38.278 1.00 12.94 C
ATOM 8 O4' A A2464 -113.583 -43.131 -37.634 1.00 12.94 O
ATOM 9 C3' A A2464 -113.230 -42.028 -39.628 1.00 12.94 C
ATOM 10 O3' A A2464 -113.102 -40.832 -40.353 1.00 12.94 O
ATOM 11 C2' A A2464 -111.913 -42.685 -39.266 1.00 12.94 C
ATOM 12 O2' A A2464 -111.003 -41.756 -38.696 1.00 12.94 O
ATOM 13 C1' A A2464 -112.384 -43.647 -38.184 1.00 12.94 C
ATOM 14 N9 A A2464 -112.648 -44.976 -38.738 1.00 12.55 N
ATOM 15 C8 A A2464 -113.802 -45.693 -38.932 1.00 12.55 C
ATOM 16 N7 A A2464 -113.564 -46.869 -39.470 1.00 12.55 N
ATOM 17 C5 A A2464 -112.178 -46.895 -39.627 1.00 12.55 C
ATOM 18 C6 A A2464 -111.293 -47.846 -40.137 1.00 12.55 C
ATOM 19 N6 A A2464 -111.695 -49.027 -40.615 1.00 12.55 N
ATOM 20 N1 A A2464 -109.975 -47.517 -40.128 1.00 12.55 N
ATOM 21 C2 A A2464 -109.564 -46.330 -39.650 1.00 12.55 C
ATOM 22 N3 A A2464 -110.289 -45.347 -39.146 1.00 12.55 N
ATOM 23 C4 A A2464 -111.595 -45.719 -39.183 1.00 12.55 C
ATOM 24 P G A2465 -113.665 -40.806 -41.844 1.00 13.09 P
ATOM 25 OP1 G A2465 -113.481 -39.430 -42.340 1.00 13.09 O
ATOM 26 OP2 G A2465 -115.047 -41.392 -41.804 1.00 13.09 O
ATOM 27 O5' G A2465 -112.694 -41.809 -42.610 1.00 13.09 O
TER
ATOM 1 O3' C B2468 -118.837 -51.311 -45.361 1.00 11.54 O
ATOM 2 P A B2469 -119.810 -51.138 -44.117 1.00 8.19 P
ATOM 3 OP1 A B2469 -120.653 -52.347 -44.082 1.00 8.19 O
ATOM 4 OP2 A B2469 -120.458 -49.812 -44.235 1.00 8.19 O
ATOM 5 O5' A B2469 -118.807 -51.129 -42.885 1.00 8.19 O
ATOM 6 C5' A B2469 -117.707 -52.028 -42.835 1.00 8.19 C
ATOM 7 C4' A B2469 -116.606 -51.509 -41.943 1.00 8.19 C
ATOM 8 O4' A B2469 -117.065 -51.465 -40.566 1.00 8.19 O
ATOM 9 C3' A B2469 -115.358 -52.355 -41.902 1.00 8.19 C
ATOM 10 O3' A B2469 -114.458 -52.029 -42.927 1.00 8.19 O
ATOM 11 C2' A B2469 -114.815 -52.093 -40.518 1.00 8.19 C
ATOM 12 O2' A B2469 -114.160 -50.839 -40.472 1.00 8.19 O
ATOM 13 C1' A B2469 -116.098 -52.001 -39.713 1.00 8.19 C
ATOM 14 N9 A B2469 -116.585 -53.324 -39.273 1.00 8.18 N
ATOM 15 C8 A B2469 -117.814 -53.791 -39.640 1.00 8.18 C
ATOM 16 N7 A B2469 -118.115 -54.970 -39.155 1.00 8.18 N
ATOM 17 C5 A B2469 -117.004 -55.336 -38.413 1.00 8.18 C
ATOM 18 C6 A B2469 -116.722 -56.500 -37.659 1.00 8.18 C
ATOM 19 N6 A B2469 -117.558 -57.537 -37.525 1.00 8.18 N
ATOM 20 N1 A B2469 -115.534 -56.570 -37.032 1.00 8.18 N
ATOM 21 C2 A B2469 -114.701 -55.531 -37.172 1.00 8.18 C
ATOM 22 N3 A B2469 -114.859 -54.393 -37.848 1.00 8.18 N
ATOM 23 C4 A B2469 -116.051 -54.331 -38.465 1.00 8.18 C
ATOM 24 P U B2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 25 OP1 U B2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 26 OP2 U B2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 27 O5' U B2470 -112.816 -53.857 -42.715 1.00 6.46 O
TER
ATOM 2 P A A2464 -117.600 -42.794 -39.115 1.00 12.94 P
ATOM 3 OP1 A A2464 -117.970 -41.423 -39.501 1.00 12.94 O
ATOM 4 OP2 A A2464 -117.989 -43.904 -40.026 1.00 12.94 O
ATOM 5 O5' A A2464 -116.042 -42.841 -38.803 1.00 12.94 O
ATOM 6 C5' A A2464 -115.388 -41.694 -38.292 1.00 12.94 C
ATOM 7 C4' A A2464 -113.903 -41.878 -38.278 1.00 12.94 C
ATOM 8 O4' A A2464 -113.583 -43.131 -37.634 1.00 12.94 O
ATOM 9 C3' A A2464 -113.230 -42.028 -39.628 1.00 12.94 C
ATOM 10 O3' A A2464 -113.102 -40.832 -40.353 1.00 12.94 O
ATOM 11 C2' A A2464 -111.913 -42.685 -39.266 1.00 12.94 C
ATOM 12 O2' A A2464 -111.003 -41.756 -38.696 1.00 12.94 O
ATOM 13 C1' A A2464 -112.384 -43.647 -38.184 1.00 12.94 C
ATOM 14 N9 A A2464 -112.648 -44.976 -38.738 1.00 12.55 N
ATOM 15 C8 A A2464 -113.802 -45.693 -38.932 1.00 12.55 C
ATOM 16 N7 A A2464 -113.564 -46.869 -39.470 1.00 12.55 N
ATOM 17 C5 A A2464 -112.178 -46.895 -39.627 1.00 12.55 C
ATOM 18 C6 A A2464 -111.293 -47.846 -40.137 1.00 12.55 C
ATOM 19 N6 A A2464 -111.695 -49.027 -40.615 1.00 12.55 N
ATOM 20 N1 A A2464 -109.975 -47.517 -40.128 1.00 12.55 N
ATOM 21 C2 A A2464 -109.564 -46.330 -39.650 1.00 12.55 C
ATOM 22 N3 A A2464 -110.289 -45.347 -39.146 1.00 12.55 N
ATOM 23 C4 A A2464 -111.595 -45.719 -39.183 1.00 12.55 C
ATOM 24 P G A2465 -113.665 -40.806 -41.844 1.00 13.09 P
ATOM 25 OP1 G A2465 -113.481 -39.430 -42.340 1.00 13.09 O
ATOM 26 OP2 G A2465 -115.047 -41.392 -41.804 1.00 13.09 O
ATOM 27 O5' G A2465 -112.694 -41.809 -42.610 1.00 13.09 O
TER
ATOM 1 O3' C B2468 -118.837 -51.311 -45.361 1.00 11.54 O
ATOM 2 P A B2469 -119.810 -51.138 -44.117 1.00 8.19 P
ATOM 3 OP1 A B2469 -120.653 -52.347 -44.082 1.00 8.19 O
ATOM 4 OP2 A B2469 -120.458 -49.812 -44.235 1.00 8.19 O
ATOM 5 O5' A B2469 -118.807 -51.129 -42.885 1.00 8.19 O
ATOM 6 C5' A B2469 -117.707 -52.028 -42.835 1.00 8.19 C
ATOM 7 C4' A B2469 -116.606 -51.509 -41.943 1.00 8.19 C
ATOM 8 O4' A B2469 -117.065 -51.465 -40.566 1.00 8.19 O
ATOM 9 C3' A B2469 -115.358 -52.355 -41.902 1.00 8.19 C
ATOM 10 O3' A B2469 -114.458 -52.029 -42.927 1.00 8.19 O
ATOM 11 C2' A B2469 -114.815 -52.093 -40.518 1.00 8.19 C
ATOM 12 O2' A B2469 -114.160 -50.839 -40.472 1.00 8.19 O
ATOM 13 C1' A B2469 -116.098 -52.001 -39.713 1.00 8.19 C
ATOM 14 N9 A B2469 -116.585 -53.324 -39.273 1.00 8.18 N
ATOM 15 C8 A B2469 -117.814 -53.791 -39.640 1.00 8.18 C
ATOM 16 N7 A B2469 -118.115 -54.970 -39.155 1.00 8.18 N
ATOM 17 C5 A B2469 -117.004 -55.336 -38.413 1.00 8.18 C
ATOM 18 C6 A B2469 -116.722 -56.500 -37.659 1.00 8.18 C
ATOM 19 N6 A B2469 -117.558 -57.537 -37.525 1.00 8.18 N
ATOM 20 N1 A B2469 -115.534 -56.570 -37.032 1.00 8.18 N
ATOM 21 C2 A B2469 -114.701 -55.531 -37.172 1.00 8.18 C
ATOM 22 N3 A B2469 -114.859 -54.393 -37.848 1.00 8.18 N
ATOM 23 C4 A B2469 -116.051 -54.331 -38.465 1.00 8.18 C
ATOM 24 P U B2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 25 OP1 U B2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 26 OP2 U B2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 27 O5' U B2470 -112.816 -53.857 -42.715 1.00 6.46 O
TER
Atoms:
OP1: (-117.970,-41.423,-39.501)
OP2: (-117.989,-43.904,-40.026)
C3': (-113.230,-42.028,-39.628)
C1': (-112.384,-43.647,-38.184)
C5': (-115.388,-41.694,-38.292)
O4': (-113.583,-43.131,-37.634)
C8: (-113.802,-45.693,-38.932)
O2': (-111.003,-41.756,-38.696)
C6: (-111.293,-47.846,-40.137)
C5: (-112.178,-46.895,-39.627)
C4: (-111.595,-45.719,-39.183)
P: (-117.600,-42.794,-39.115)
C4': (-113.903,-41.878,-38.278)
C2': (-111.913,-42.685,-39.266)
C2: (-109.564,-46.330,-39.650)
N1: (-109.975,-47.517,-40.128)
N3: (-110.289,-45.347,-39.146)
N6: (-111.695,-49.027,-40.615)
N7: (-113.564,-46.869,-39.470)
N9: (-112.648,-44.976,-38.738)
O5': (-116.042,-42.841,-38.803)
O3': (-113.102,-40.832,-40.353)
OP2: (-117.989,-43.904,-40.026)
C3': (-113.230,-42.028,-39.628)
C1': (-112.384,-43.647,-38.184)
C5': (-115.388,-41.694,-38.292)
O4': (-113.583,-43.131,-37.634)
C8: (-113.802,-45.693,-38.932)
O2': (-111.003,-41.756,-38.696)
C6: (-111.293,-47.846,-40.137)
C5: (-112.178,-46.895,-39.627)
C4: (-111.595,-45.719,-39.183)
P: (-117.600,-42.794,-39.115)
C4': (-113.903,-41.878,-38.278)
C2': (-111.913,-42.685,-39.266)
C2: (-109.564,-46.330,-39.650)
N1: (-109.975,-47.517,-40.128)
N3: (-110.289,-45.347,-39.146)
N6: (-111.695,-49.027,-40.615)
N7: (-113.564,-46.869,-39.470)
N9: (-112.648,-44.976,-38.738)
O5': (-116.042,-42.841,-38.803)
O3': (-113.102,-40.832,-40.353)
OP1: (-120.653,-52.347,-44.082)
OP2: (-120.458,-49.812,-44.235)
C3': (-115.358,-52.355,-41.902)
C1': (-116.098,-52.001,-39.713)
C5': (-117.707,-52.028,-42.835)
O4': (-117.065,-51.465,-40.566)
C8: (-117.814,-53.791,-39.640)
O2': (-114.160,-50.839,-40.472)
C6: (-116.722,-56.500,-37.659)
C5: (-117.004,-55.336,-38.413)
C4: (-116.051,-54.331,-38.465)
P: (-119.810,-51.138,-44.117)
C4': (-116.606,-51.509,-41.943)
C2': (-114.815,-52.093,-40.518)
C2: (-114.701,-55.531,-37.172)
N1: (-115.534,-56.570,-37.032)
N3: (-114.859,-54.393,-37.848)
N6: (-117.558,-57.537,-37.525)
N7: (-118.115,-54.970,-39.155)
N9: (-116.585,-53.324,-39.273)
O5': (-118.807,-51.129,-42.885)
O3': (-114.458,-52.029,-42.927)
OP2: (-120.458,-49.812,-44.235)
C3': (-115.358,-52.355,-41.902)
C1': (-116.098,-52.001,-39.713)
C5': (-117.707,-52.028,-42.835)
O4': (-117.065,-51.465,-40.566)
C8: (-117.814,-53.791,-39.640)
O2': (-114.160,-50.839,-40.472)
C6: (-116.722,-56.500,-37.659)
C5: (-117.004,-55.336,-38.413)
C4: (-116.051,-54.331,-38.465)
P: (-119.810,-51.138,-44.117)
C4': (-116.606,-51.509,-41.943)
C2': (-114.815,-52.093,-40.518)
C2: (-114.701,-55.531,-37.172)
N1: (-115.534,-56.570,-37.032)
N3: (-114.859,-54.393,-37.848)
N6: (-117.558,-57.537,-37.525)
N7: (-118.115,-54.970,-39.155)
N9: (-116.585,-53.324,-39.273)
O5': (-118.807,-51.129,-42.885)
O3': (-114.458,-52.029,-42.927)
Image (generated by PyMOL):