Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A828:A2239
Extra
PDB:
ATOM 1 O3' U A 827 -58.182 151.561 158.900 1.00 0.45 O
ATOM 2 P A A 828 -57.038 150.447 159.085 1.00 1.06 P
ATOM 3 OP1 A A 828 -55.986 151.038 159.949 1.00 1.06 O
ATOM 4 OP2 A A 828 -56.671 149.980 157.737 1.00 1.06 O
ATOM 5 O5' A A 828 -57.772 149.281 159.863 1.00 1.06 O
ATOM 6 C5' A A 828 -58.933 149.522 160.625 1.00 1.06 C
ATOM 7 C4' A A 828 -59.923 148.411 160.448 1.00 1.06 C
ATOM 8 O4' A A 828 -60.787 148.713 159.312 1.00 1.06 O
ATOM 9 C3' A A 828 -59.305 147.036 160.158 1.00 1.06 C
ATOM 10 O3' A A 828 -59.973 146.023 160.925 1.00 1.06 O
ATOM 11 C2' A A 828 -59.581 146.845 158.657 1.00 1.06 C
ATOM 12 O2' A A 828 -59.658 145.505 158.234 1.00 1.06 O
ATOM 13 C1' A A 828 -60.904 147.563 158.509 1.00 1.06 C
ATOM 14 N9 A A 828 -61.235 147.977 157.153 1.00 0.23 N
ATOM 15 C8 A A 828 -60.542 147.951 155.975 1.00 0.23 C
ATOM 16 N7 A A 828 -61.230 148.417 154.949 1.00 0.23 N
ATOM 17 C5 A A 828 -62.449 148.755 155.486 1.00 0.23 C
ATOM 18 C6 A A 828 -63.615 149.310 154.939 1.00 0.23 C
ATOM 19 N6 A A 828 -63.732 149.635 153.641 1.00 0.23 N
ATOM 20 N1 A A 828 -64.666 149.540 155.788 1.00 0.23 N
ATOM 21 C2 A A 828 -64.555 149.233 157.090 1.00 0.23 C
ATOM 22 N3 A A 828 -63.498 148.699 157.723 1.00 0.23 N
ATOM 23 C4 A A 828 -62.471 148.484 156.847 1.00 0.23 C
ATOM 24 P G A 829 -59.126 144.883 161.705 1.00 0.51 P
ATOM 25 OP1 G A 829 -57.724 144.969 161.227 1.00 0.51 O
ATOM 26 OP2 G A 829 -59.863 143.605 161.548 1.00 0.51 O
ATOM 27 O5' G A 829 -59.191 145.337 163.203 1.00 0.51 O
TER
ATOM 1 O3' G B2238 -54.230 148.112 149.871 1.00 0.01 O
ATOM 2 P A B2239 -54.840 146.755 150.464 1.00 0.01 P
ATOM 3 OP1 A B2239 -54.136 146.474 151.729 1.00 0.01 O
ATOM 4 OP2 A B2239 -54.803 145.750 149.394 1.00 0.01 O
ATOM 5 O5' A B2239 -56.331 147.141 150.759 1.00 0.01 O
ATOM 6 C5' A B2239 -56.682 147.795 151.949 1.00 0.01 C
ATOM 7 C4' A B2239 -58.157 147.953 152.024 1.00 0.01 C
ATOM 8 O4' A B2239 -58.632 148.458 150.753 1.00 0.01 O
ATOM 9 C3' A B2239 -58.933 146.671 152.230 1.00 0.01 C
ATOM 10 O3' A B2239 -59.007 146.278 153.592 1.00 0.01 O
ATOM 11 C2' A B2239 -60.283 146.988 151.586 1.00 0.01 C
ATOM 12 O2' A B2239 -61.106 147.789 152.430 1.00 0.01 O
ATOM 13 C1' A B2239 -59.845 147.830 150.400 1.00 0.01 C
ATOM 14 N9 A B2239 -59.629 147.002 149.191 1.00 0.01 N
ATOM 15 C8 A B2239 -58.491 146.462 148.656 1.00 0.01 C
ATOM 16 N7 A B2239 -58.697 145.769 147.578 1.00 0.01 N
ATOM 17 C5 A B2239 -60.056 145.850 147.405 1.00 0.01 C
ATOM 18 C6 A B2239 -60.911 145.320 146.443 1.00 0.01 C
ATOM 19 N6 A B2239 -60.480 144.570 145.434 1.00 0.01 N
ATOM 20 N1 A B2239 -62.222 145.595 146.540 1.00 0.01 N
ATOM 21 C2 A B2239 -62.633 146.350 147.555 1.00 0.01 C
ATOM 22 N3 A B2239 -61.931 146.886 148.539 1.00 0.01 N
ATOM 23 C4 A B2239 -60.638 146.594 148.386 1.00 0.01 C
ATOM 24 P C B2240 -59.564 144.822 153.980 1.00 0.01 P
ATOM 25 OP1 C B2240 -59.743 144.790 155.462 1.00 0.01 O
ATOM 26 OP2 C B2240 -58.668 143.838 153.345 1.00 0.01 O
ATOM 27 O5' C B2240 -60.977 144.773 153.268 1.00 0.01 O
TER
ATOM 2 P A A 828 -57.038 150.447 159.085 1.00 1.06 P
ATOM 3 OP1 A A 828 -55.986 151.038 159.949 1.00 1.06 O
ATOM 4 OP2 A A 828 -56.671 149.980 157.737 1.00 1.06 O
ATOM 5 O5' A A 828 -57.772 149.281 159.863 1.00 1.06 O
ATOM 6 C5' A A 828 -58.933 149.522 160.625 1.00 1.06 C
ATOM 7 C4' A A 828 -59.923 148.411 160.448 1.00 1.06 C
ATOM 8 O4' A A 828 -60.787 148.713 159.312 1.00 1.06 O
ATOM 9 C3' A A 828 -59.305 147.036 160.158 1.00 1.06 C
ATOM 10 O3' A A 828 -59.973 146.023 160.925 1.00 1.06 O
ATOM 11 C2' A A 828 -59.581 146.845 158.657 1.00 1.06 C
ATOM 12 O2' A A 828 -59.658 145.505 158.234 1.00 1.06 O
ATOM 13 C1' A A 828 -60.904 147.563 158.509 1.00 1.06 C
ATOM 14 N9 A A 828 -61.235 147.977 157.153 1.00 0.23 N
ATOM 15 C8 A A 828 -60.542 147.951 155.975 1.00 0.23 C
ATOM 16 N7 A A 828 -61.230 148.417 154.949 1.00 0.23 N
ATOM 17 C5 A A 828 -62.449 148.755 155.486 1.00 0.23 C
ATOM 18 C6 A A 828 -63.615 149.310 154.939 1.00 0.23 C
ATOM 19 N6 A A 828 -63.732 149.635 153.641 1.00 0.23 N
ATOM 20 N1 A A 828 -64.666 149.540 155.788 1.00 0.23 N
ATOM 21 C2 A A 828 -64.555 149.233 157.090 1.00 0.23 C
ATOM 22 N3 A A 828 -63.498 148.699 157.723 1.00 0.23 N
ATOM 23 C4 A A 828 -62.471 148.484 156.847 1.00 0.23 C
ATOM 24 P G A 829 -59.126 144.883 161.705 1.00 0.51 P
ATOM 25 OP1 G A 829 -57.724 144.969 161.227 1.00 0.51 O
ATOM 26 OP2 G A 829 -59.863 143.605 161.548 1.00 0.51 O
ATOM 27 O5' G A 829 -59.191 145.337 163.203 1.00 0.51 O
TER
ATOM 1 O3' G B2238 -54.230 148.112 149.871 1.00 0.01 O
ATOM 2 P A B2239 -54.840 146.755 150.464 1.00 0.01 P
ATOM 3 OP1 A B2239 -54.136 146.474 151.729 1.00 0.01 O
ATOM 4 OP2 A B2239 -54.803 145.750 149.394 1.00 0.01 O
ATOM 5 O5' A B2239 -56.331 147.141 150.759 1.00 0.01 O
ATOM 6 C5' A B2239 -56.682 147.795 151.949 1.00 0.01 C
ATOM 7 C4' A B2239 -58.157 147.953 152.024 1.00 0.01 C
ATOM 8 O4' A B2239 -58.632 148.458 150.753 1.00 0.01 O
ATOM 9 C3' A B2239 -58.933 146.671 152.230 1.00 0.01 C
ATOM 10 O3' A B2239 -59.007 146.278 153.592 1.00 0.01 O
ATOM 11 C2' A B2239 -60.283 146.988 151.586 1.00 0.01 C
ATOM 12 O2' A B2239 -61.106 147.789 152.430 1.00 0.01 O
ATOM 13 C1' A B2239 -59.845 147.830 150.400 1.00 0.01 C
ATOM 14 N9 A B2239 -59.629 147.002 149.191 1.00 0.01 N
ATOM 15 C8 A B2239 -58.491 146.462 148.656 1.00 0.01 C
ATOM 16 N7 A B2239 -58.697 145.769 147.578 1.00 0.01 N
ATOM 17 C5 A B2239 -60.056 145.850 147.405 1.00 0.01 C
ATOM 18 C6 A B2239 -60.911 145.320 146.443 1.00 0.01 C
ATOM 19 N6 A B2239 -60.480 144.570 145.434 1.00 0.01 N
ATOM 20 N1 A B2239 -62.222 145.595 146.540 1.00 0.01 N
ATOM 21 C2 A B2239 -62.633 146.350 147.555 1.00 0.01 C
ATOM 22 N3 A B2239 -61.931 146.886 148.539 1.00 0.01 N
ATOM 23 C4 A B2239 -60.638 146.594 148.386 1.00 0.01 C
ATOM 24 P C B2240 -59.564 144.822 153.980 1.00 0.01 P
ATOM 25 OP1 C B2240 -59.743 144.790 155.462 1.00 0.01 O
ATOM 26 OP2 C B2240 -58.668 143.838 153.345 1.00 0.01 O
ATOM 27 O5' C B2240 -60.977 144.773 153.268 1.00 0.01 O
TER
Atoms:
OP1: (-55.986,151.038,159.949)
OP2: (-56.671,149.980,157.737)
C3': (-59.305,147.036,160.158)
C1': (-60.904,147.563,158.509)
C5': (-58.933,149.522,160.625)
O4': (-60.787,148.713,159.312)
C8: (-60.542,147.951,155.975)
O2': (-59.658,145.505,158.234)
C6: (-63.615,149.310,154.939)
C5: (-62.449,148.755,155.486)
C4: (-62.471,148.484,156.847)
P: (-57.038,150.447,159.085)
C4': (-59.923,148.411,160.448)
C2': (-59.581,146.845,158.657)
C2: (-64.555,149.233,157.090)
N1: (-64.666,149.540,155.788)
N3: (-63.498,148.699,157.723)
N6: (-63.732,149.635,153.641)
N7: (-61.230,148.417,154.949)
N9: (-61.235,147.977,157.153)
O5': (-57.772,149.281,159.863)
O3': (-59.973,146.023,160.925)
OP2: (-56.671,149.980,157.737)
C3': (-59.305,147.036,160.158)
C1': (-60.904,147.563,158.509)
C5': (-58.933,149.522,160.625)
O4': (-60.787,148.713,159.312)
C8: (-60.542,147.951,155.975)
O2': (-59.658,145.505,158.234)
C6: (-63.615,149.310,154.939)
C5: (-62.449,148.755,155.486)
C4: (-62.471,148.484,156.847)
P: (-57.038,150.447,159.085)
C4': (-59.923,148.411,160.448)
C2': (-59.581,146.845,158.657)
C2: (-64.555,149.233,157.090)
N1: (-64.666,149.540,155.788)
N3: (-63.498,148.699,157.723)
N6: (-63.732,149.635,153.641)
N7: (-61.230,148.417,154.949)
N9: (-61.235,147.977,157.153)
O5': (-57.772,149.281,159.863)
O3': (-59.973,146.023,160.925)
OP1: (-54.136,146.474,151.729)
OP2: (-54.803,145.750,149.394)
C3': (-58.933,146.671,152.230)
C1': (-59.845,147.830,150.400)
C5': (-56.682,147.795,151.949)
O4': (-58.632,148.458,150.753)
C8: (-58.491,146.462,148.656)
O2': (-61.106,147.789,152.430)
C6: (-60.911,145.320,146.443)
C5: (-60.056,145.850,147.405)
C4: (-60.638,146.594,148.386)
P: (-54.840,146.755,150.464)
C4': (-58.157,147.953,152.024)
C2': (-60.283,146.988,151.586)
C2: (-62.633,146.350,147.555)
N1: (-62.222,145.595,146.540)
N3: (-61.931,146.886,148.539)
N6: (-60.480,144.570,145.434)
N7: (-58.697,145.769,147.578)
N9: (-59.629,147.002,149.191)
O5': (-56.331,147.141,150.759)
O3': (-59.007,146.278,153.592)
OP2: (-54.803,145.750,149.394)
C3': (-58.933,146.671,152.230)
C1': (-59.845,147.830,150.400)
C5': (-56.682,147.795,151.949)
O4': (-58.632,148.458,150.753)
C8: (-58.491,146.462,148.656)
O2': (-61.106,147.789,152.430)
C6: (-60.911,145.320,146.443)
C5: (-60.056,145.850,147.405)
C4: (-60.638,146.594,148.386)
P: (-54.840,146.755,150.464)
C4': (-58.157,147.953,152.024)
C2': (-60.283,146.988,151.586)
C2: (-62.633,146.350,147.555)
N1: (-62.222,145.595,146.540)
N3: (-61.931,146.886,148.539)
N6: (-60.480,144.570,145.434)
N7: (-58.697,145.769,147.578)
N9: (-59.629,147.002,149.191)
O5': (-56.331,147.141,150.759)
O3': (-59.007,146.278,153.592)
Image (generated by PyMOL):