ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A208:A425

Extra

PDB:
ATOM 1 O3' G A 207 -35.778 200.345 162.297 1.00 8.78 O
ATOM 2 P A A 208 -37.204 199.864 162.840 1.00 24.92 P
ATOM 3 OP1 A A 208 -36.969 199.402 164.227 1.00 8.94 O
ATOM 4 OP2 A A 208 -37.859 198.953 161.863 1.00 8.94 O
ATOM 5 O5' A A 208 -38.065 201.204 162.884 1.00 60.31 O
ATOM 6 C5' A A 208 -37.833 202.198 163.899 1.00 60.31 C
ATOM 7 C4' A A 208 -38.276 203.561 163.415 1.00 60.31 C
ATOM 8 O4' A A 208 -37.498 203.904 162.247 1.00 60.31 O
ATOM 9 C3' A A 208 -39.743 203.705 163.021 1.00 60.31 C
ATOM 10 O3' A A 208 -40.165 205.023 163.349 1.00 60.31 O
ATOM 11 C2' A A 208 -39.712 203.569 161.505 1.00 60.31 C
ATOM 12 O2' A A 208 -40.741 204.307 160.879 1.00 60.31 O
ATOM 13 C1' A A 208 -38.357 204.183 161.168 1.00 60.31 C
ATOM 14 N9 A A 208 -37.738 203.630 159.972 1.00 35.31 N
ATOM 15 C8 A A 208 -37.354 202.336 159.751 1.00 35.31 C
ATOM 16 N7 A A 208 -36.784 202.148 158.586 1.00 35.30 N
ATOM 17 C5 A A 208 -36.805 203.403 157.999 1.00 35.29 C
ATOM 18 C6 A A 208 -36.348 203.873 156.762 1.00 35.32 C
ATOM 19 N6 A A 208 -35.741 203.108 155.861 1.00 35.36 N
ATOM 20 N1 A A 208 -36.527 205.173 156.480 1.00 35.32 N
ATOM 21 C2 A A 208 -37.118 205.943 157.390 1.00 35.34 C
ATOM 22 N3 A A 208 -37.583 205.625 158.589 1.00 35.34 N
ATOM 23 C4 A A 208 -37.396 204.322 158.837 1.00 35.29 C
ATOM 24 P A A 209 -41.216 205.253 164.535 1.00 98.51 P
ATOM 25 OP1 A A 209 -40.582 204.757 165.791 1.00 28.88 O
ATOM 26 OP2 A A 209 -42.547 204.718 164.105 1.00 28.87 O
ATOM 27 O5' A A 209 -41.320 206.836 164.664 1.00136.00 O
TER

ATOM 1 O3' C B 424 -30.579 197.574 150.351 1.00 8.47 O
ATOM 2 P G B 425 -32.174 197.361 150.328 1.00 26.63 P
ATOM 3 OP1 G B 425 -32.454 195.999 150.862 1.00 50.57 O
ATOM 4 OP2 G B 425 -32.705 197.761 148.998 1.00 50.42 O
ATOM 5 O5' G B 425 -32.702 198.375 151.419 1.00 10.21 O
ATOM 6 C5' G B 425 -32.370 198.166 152.787 1.00 10.21 C
ATOM 7 C4' G B 425 -33.259 198.996 153.660 1.00 10.21 C
ATOM 8 O4' G B 425 -32.898 200.395 153.537 1.00 10.21 O
ATOM 9 C3' G B 425 -34.732 198.933 153.296 1.00 10.21 C
ATOM 10 O3' G B 425 -35.355 197.812 153.882 1.00 10.21 O
ATOM 11 C2' G B 425 -35.265 200.253 153.839 1.00 10.21 C
ATOM 12 O2' G B 425 -35.594 200.189 155.218 1.00 10.21 O
ATOM 13 C1' G B 425 -34.072 201.189 153.595 1.00 10.21 C
ATOM 14 N9 G B 425 -34.196 201.903 152.328 1.00 51.12 N
ATOM 15 C8 G B 425 -33.755 201.485 151.096 1.00 51.23 C
ATOM 16 N7 G B 425 -34.053 202.317 150.139 1.00 51.36 N
ATOM 17 C5 G B 425 -34.723 203.350 150.778 1.00 51.32 C
ATOM 18 C6 G B 425 -35.288 204.529 150.255 1.00 51.09 C
ATOM 19 O6 G B 425 -35.318 204.910 149.083 1.00 51.05 O
ATOM 20 N1 G B 425 -35.866 205.304 151.251 1.00 51.05 N
ATOM 21 C2 G B 425 -35.891 204.984 152.582 1.00 51.13 C
ATOM 22 N2 G B 425 -36.490 205.865 153.393 1.00 51.09 N
ATOM 23 N3 G B 425 -35.369 203.884 153.082 1.00 51.32 N
ATOM 24 C4 G B 425 -34.807 203.116 152.129 1.00 51.38 C
ATOM 25 P G B 426 -36.883 197.484 153.533 1.00 24.02 P
ATOM 26 OP1 G B 426 -37.434 198.529 152.611 1.00 23.82 O
ATOM 27 OP2 G B 426 -37.565 197.207 154.824 1.00 23.93 O
ATOM 28 O5' G B 426 -36.784 196.100 152.757 1.00 2.90 O
TER

Atoms:
OP1: (-36.969,199.402,164.227)
OP2: (-37.859,198.953,161.863)
C3': (-39.743,203.705,163.021)
C1': (-38.357,204.183,161.168)
C5': (-37.833,202.198,163.899)
O4': (-37.498,203.904,162.247)
C8: (-37.354,202.336,159.751)
O2': (-40.741,204.307,160.879)
C6: (-36.348,203.873,156.762)
C5: (-36.805,203.403,157.999)
C4: (-37.396,204.322,158.837)
P: (-37.204,199.864,162.840)
C4': (-38.276,203.561,163.415)
C2': (-39.712,203.569,161.505)
C2: (-37.118,205.943,157.390)
N1: (-36.527,205.173,156.480)
N3: (-37.583,205.625,158.589)
N6: (-35.741,203.108,155.861)
N7: (-36.784,202.148,158.586)
N9: (-37.738,203.630,159.972)
O5': (-38.065,201.204,162.884)
O3': (-40.165,205.023,163.349)
OP1: (-32.454,195.999,150.862)
OP2: (-32.705,197.761,148.998)
C3': (-34.732,198.933,153.296)
C1': (-34.072,201.189,153.595)
C5': (-32.370,198.166,152.787)
O6: (-35.318,204.910,149.083)
O4': (-32.898,200.395,153.537)
C8: (-33.755,201.485,151.096)
C2: (-35.891,204.984,152.582)
C6: (-35.288,204.529,150.255)
C5: (-34.723,203.350,150.778)
C4: (-34.807,203.116,152.129)
P: (-32.174,197.361,150.328)
C4': (-33.259,198.996,153.660)
C2': (-35.265,200.253,153.839)
O2': (-35.594,200.189,155.218)
N1: (-35.866,205.304,151.251)
N2: (-36.490,205.865,153.393)
N3: (-35.369,203.884,153.082)
N7: (-34.053,202.317,150.139)
N9: (-34.196,201.903,152.328)
O5': (-32.702,198.375,151.419)
O3': (-35.355,197.812,153.882)
Image (generated by PyMOL):
PyMOL image
show in jmol