Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A51:A49
Extra
PDB:
ATOM 1 O3' A A 50 -52.445 -50.785 5.924 1.00 69.23 O
ATOM 2 P A A 51 -50.988 -51.306 6.341 1.00 69.52 P
ATOM 3 OP1 A A 51 -50.286 -51.706 5.095 1.00 70.99 O
ATOM 4 OP2 A A 51 -51.167 -52.284 7.437 1.00 69.34 O
ATOM 5 O5' A A 51 -50.263 -50.010 6.933 1.00 67.58 O
ATOM 6 C5' A A 51 -50.100 -48.847 6.120 1.00 68.41 C
ATOM 7 C4' A A 51 -50.368 -47.584 6.913 1.00 67.30 C
ATOM 8 O4' A A 51 -51.543 -47.750 7.744 1.00 67.12 O
ATOM 9 C3' A A 51 -49.259 -47.225 7.886 1.00 65.86 C
ATOM 10 O3' A A 51 -48.273 -46.467 7.216 1.00 66.13 O
ATOM 11 C2' A A 51 -49.998 -46.407 8.940 1.00 64.77 C
ATOM 12 O2' A A 51 -50.138 -45.045 8.597 1.00 65.26 O
ATOM 13 C1' A A 51 -51.374 -47.058 8.969 1.00 65.35 C
ATOM 14 N9 A A 51 -51.558 -47.978 10.090 1.00 64.59 N
ATOM 15 C8 A A 51 -51.396 -49.337 10.081 1.00 65.18 C
ATOM 16 N7 A A 51 -51.633 -49.909 11.237 1.00 64.27 N
ATOM 17 C5 A A 51 -51.976 -48.854 12.064 1.00 63.14 C
ATOM 18 C6 A A 51 -52.351 -48.789 13.424 1.00 61.86 C
ATOM 19 N6 A A 51 -52.432 -49.868 14.204 1.00 62.08 N
ATOM 20 N1 A A 51 -52.635 -47.577 13.958 1.00 60.77 N
ATOM 21 C2 A A 51 -52.546 -46.494 13.173 1.00 60.99 C
ATOM 22 N3 A A 51 -52.212 -46.434 11.880 1.00 62.39 N
ATOM 23 C4 A A 51 -51.934 -47.654 11.377 1.00 63.30 C
ATOM 24 P A A 52 -46.722 -46.687 7.538 1.00 66.33 P
ATOM 25 OP1 A A 52 -45.966 -45.943 6.506 1.00 67.23 O
ATOM 26 OP2 A A 52 -46.451 -48.127 7.749 1.00 66.84 O
ATOM 27 O5' A A 52 -46.539 -45.957 8.947 1.00 64.88 O
TER
ATOM 1 O3' G B 48 -51.598 -59.549 13.081 1.00 73.09 O
ATOM 2 P G B 49 -52.782 -59.261 12.042 1.00 74.26 P
ATOM 3 OP1 G B 49 -53.949 -60.082 12.447 1.00 75.68 O
ATOM 4 OP2 G B 49 -52.287 -59.381 10.644 1.00 75.07 O
ATOM 5 O5' G B 49 -53.081 -57.724 12.385 1.00 71.24 O
ATOM 6 C5' G B 49 -53.224 -56.754 11.351 1.00 69.50 C
ATOM 7 C4' G B 49 -52.667 -55.417 11.798 1.00 66.07 C
ATOM 8 O4' G B 49 -51.215 -55.442 11.801 1.00 64.72 O
ATOM 9 C3' G B 49 -53.021 -54.263 10.881 1.00 65.44 C
ATOM 10 O3' G B 49 -54.299 -53.752 11.222 1.00 65.24 O
ATOM 11 C2' G B 49 -51.910 -53.270 11.195 1.00 63.24 C
ATOM 12 O2' G B 49 -52.163 -52.530 12.374 1.00 61.83 O
ATOM 13 C1' G B 49 -50.704 -54.194 11.373 1.00 62.70 C
ATOM 14 N9 G B 49 -49.956 -54.395 10.134 1.00 62.53 N
ATOM 15 C8 G B 49 -49.931 -55.527 9.360 1.00 63.85 C
ATOM 16 N7 G B 49 -49.178 -55.420 8.302 1.00 64.48 N
ATOM 17 C5 G B 49 -48.671 -54.131 8.370 1.00 62.81 C
ATOM 18 C6 G B 49 -47.795 -53.441 7.496 1.00 62.74 C
ATOM 19 O6 G B 49 -47.273 -53.849 6.451 1.00 63.81 O
ATOM 20 N1 G B 49 -47.528 -52.146 7.935 1.00 61.04 N
ATOM 21 C2 G B 49 -48.048 -51.590 9.078 1.00 59.84 C
ATOM 22 N2 G B 49 -47.687 -50.330 9.355 1.00 58.79 N
ATOM 23 N3 G B 49 -48.870 -52.225 9.901 1.00 60.13 N
ATOM 24 C4 G B 49 -49.140 -53.489 9.492 1.00 61.56 C
ATOM 25 P A B 50 -55.463 -53.694 10.124 1.00 67.29 P
ATOM 26 OP1 A B 50 -56.450 -52.704 10.607 1.00 66.30 O
ATOM 27 OP2 A B 50 -55.917 -55.071 9.824 1.00 68.79 O
ATOM 28 O5' A B 50 -54.713 -53.127 8.822 1.00 67.99 O
TER
ATOM 2 P A A 51 -50.988 -51.306 6.341 1.00 69.52 P
ATOM 3 OP1 A A 51 -50.286 -51.706 5.095 1.00 70.99 O
ATOM 4 OP2 A A 51 -51.167 -52.284 7.437 1.00 69.34 O
ATOM 5 O5' A A 51 -50.263 -50.010 6.933 1.00 67.58 O
ATOM 6 C5' A A 51 -50.100 -48.847 6.120 1.00 68.41 C
ATOM 7 C4' A A 51 -50.368 -47.584 6.913 1.00 67.30 C
ATOM 8 O4' A A 51 -51.543 -47.750 7.744 1.00 67.12 O
ATOM 9 C3' A A 51 -49.259 -47.225 7.886 1.00 65.86 C
ATOM 10 O3' A A 51 -48.273 -46.467 7.216 1.00 66.13 O
ATOM 11 C2' A A 51 -49.998 -46.407 8.940 1.00 64.77 C
ATOM 12 O2' A A 51 -50.138 -45.045 8.597 1.00 65.26 O
ATOM 13 C1' A A 51 -51.374 -47.058 8.969 1.00 65.35 C
ATOM 14 N9 A A 51 -51.558 -47.978 10.090 1.00 64.59 N
ATOM 15 C8 A A 51 -51.396 -49.337 10.081 1.00 65.18 C
ATOM 16 N7 A A 51 -51.633 -49.909 11.237 1.00 64.27 N
ATOM 17 C5 A A 51 -51.976 -48.854 12.064 1.00 63.14 C
ATOM 18 C6 A A 51 -52.351 -48.789 13.424 1.00 61.86 C
ATOM 19 N6 A A 51 -52.432 -49.868 14.204 1.00 62.08 N
ATOM 20 N1 A A 51 -52.635 -47.577 13.958 1.00 60.77 N
ATOM 21 C2 A A 51 -52.546 -46.494 13.173 1.00 60.99 C
ATOM 22 N3 A A 51 -52.212 -46.434 11.880 1.00 62.39 N
ATOM 23 C4 A A 51 -51.934 -47.654 11.377 1.00 63.30 C
ATOM 24 P A A 52 -46.722 -46.687 7.538 1.00 66.33 P
ATOM 25 OP1 A A 52 -45.966 -45.943 6.506 1.00 67.23 O
ATOM 26 OP2 A A 52 -46.451 -48.127 7.749 1.00 66.84 O
ATOM 27 O5' A A 52 -46.539 -45.957 8.947 1.00 64.88 O
TER
ATOM 1 O3' G B 48 -51.598 -59.549 13.081 1.00 73.09 O
ATOM 2 P G B 49 -52.782 -59.261 12.042 1.00 74.26 P
ATOM 3 OP1 G B 49 -53.949 -60.082 12.447 1.00 75.68 O
ATOM 4 OP2 G B 49 -52.287 -59.381 10.644 1.00 75.07 O
ATOM 5 O5' G B 49 -53.081 -57.724 12.385 1.00 71.24 O
ATOM 6 C5' G B 49 -53.224 -56.754 11.351 1.00 69.50 C
ATOM 7 C4' G B 49 -52.667 -55.417 11.798 1.00 66.07 C
ATOM 8 O4' G B 49 -51.215 -55.442 11.801 1.00 64.72 O
ATOM 9 C3' G B 49 -53.021 -54.263 10.881 1.00 65.44 C
ATOM 10 O3' G B 49 -54.299 -53.752 11.222 1.00 65.24 O
ATOM 11 C2' G B 49 -51.910 -53.270 11.195 1.00 63.24 C
ATOM 12 O2' G B 49 -52.163 -52.530 12.374 1.00 61.83 O
ATOM 13 C1' G B 49 -50.704 -54.194 11.373 1.00 62.70 C
ATOM 14 N9 G B 49 -49.956 -54.395 10.134 1.00 62.53 N
ATOM 15 C8 G B 49 -49.931 -55.527 9.360 1.00 63.85 C
ATOM 16 N7 G B 49 -49.178 -55.420 8.302 1.00 64.48 N
ATOM 17 C5 G B 49 -48.671 -54.131 8.370 1.00 62.81 C
ATOM 18 C6 G B 49 -47.795 -53.441 7.496 1.00 62.74 C
ATOM 19 O6 G B 49 -47.273 -53.849 6.451 1.00 63.81 O
ATOM 20 N1 G B 49 -47.528 -52.146 7.935 1.00 61.04 N
ATOM 21 C2 G B 49 -48.048 -51.590 9.078 1.00 59.84 C
ATOM 22 N2 G B 49 -47.687 -50.330 9.355 1.00 58.79 N
ATOM 23 N3 G B 49 -48.870 -52.225 9.901 1.00 60.13 N
ATOM 24 C4 G B 49 -49.140 -53.489 9.492 1.00 61.56 C
ATOM 25 P A B 50 -55.463 -53.694 10.124 1.00 67.29 P
ATOM 26 OP1 A B 50 -56.450 -52.704 10.607 1.00 66.30 O
ATOM 27 OP2 A B 50 -55.917 -55.071 9.824 1.00 68.79 O
ATOM 28 O5' A B 50 -54.713 -53.127 8.822 1.00 67.99 O
TER
Atoms:
OP1: (-50.286,-51.706,5.095)
OP2: (-51.167,-52.284,7.437)
C3': (-49.259,-47.225,7.886)
C1': (-51.374,-47.058,8.969)
C5': (-50.100,-48.847,6.120)
O4': (-51.543,-47.750,7.744)
C8: (-51.396,-49.337,10.081)
O2': (-50.138,-45.045,8.597)
C6: (-52.351,-48.789,13.424)
C5: (-51.976,-48.854,12.064)
C4: (-51.934,-47.654,11.377)
P: (-50.988,-51.306,6.341)
C4': (-50.368,-47.584,6.913)
C2': (-49.998,-46.407,8.940)
C2: (-52.546,-46.494,13.173)
N1: (-52.635,-47.577,13.958)
N3: (-52.212,-46.434,11.880)
N6: (-52.432,-49.868,14.204)
N7: (-51.633,-49.909,11.237)
N9: (-51.558,-47.978,10.090)
O5': (-50.263,-50.010,6.933)
O3': (-48.273,-46.467,7.216)
OP2: (-51.167,-52.284,7.437)
C3': (-49.259,-47.225,7.886)
C1': (-51.374,-47.058,8.969)
C5': (-50.100,-48.847,6.120)
O4': (-51.543,-47.750,7.744)
C8: (-51.396,-49.337,10.081)
O2': (-50.138,-45.045,8.597)
C6: (-52.351,-48.789,13.424)
C5: (-51.976,-48.854,12.064)
C4: (-51.934,-47.654,11.377)
P: (-50.988,-51.306,6.341)
C4': (-50.368,-47.584,6.913)
C2': (-49.998,-46.407,8.940)
C2: (-52.546,-46.494,13.173)
N1: (-52.635,-47.577,13.958)
N3: (-52.212,-46.434,11.880)
N6: (-52.432,-49.868,14.204)
N7: (-51.633,-49.909,11.237)
N9: (-51.558,-47.978,10.090)
O5': (-50.263,-50.010,6.933)
O3': (-48.273,-46.467,7.216)
OP1: (-53.949,-60.082,12.447)
OP2: (-52.287,-59.381,10.644)
C3': (-53.021,-54.263,10.881)
C1': (-50.704,-54.194,11.373)
C5': (-53.224,-56.754,11.351)
O6: (-47.273,-53.849,6.451)
O4': (-51.215,-55.442,11.801)
C8: (-49.931,-55.527,9.360)
C2: (-48.048,-51.590,9.078)
C6: (-47.795,-53.441,7.496)
C5: (-48.671,-54.131,8.370)
C4: (-49.140,-53.489,9.492)
P: (-52.782,-59.261,12.042)
C4': (-52.667,-55.417,11.798)
C2': (-51.910,-53.270,11.195)
O2': (-52.163,-52.530,12.374)
N1: (-47.528,-52.146,7.935)
N2: (-47.687,-50.330,9.355)
N3: (-48.870,-52.225,9.901)
N7: (-49.178,-55.420,8.302)
N9: (-49.956,-54.395,10.134)
O5': (-53.081,-57.724,12.385)
O3': (-54.299,-53.752,11.222)
OP2: (-52.287,-59.381,10.644)
C3': (-53.021,-54.263,10.881)
C1': (-50.704,-54.194,11.373)
C5': (-53.224,-56.754,11.351)
O6: (-47.273,-53.849,6.451)
O4': (-51.215,-55.442,11.801)
C8: (-49.931,-55.527,9.360)
C2: (-48.048,-51.590,9.078)
C6: (-47.795,-53.441,7.496)
C5: (-48.671,-54.131,8.370)
C4: (-49.140,-53.489,9.492)
P: (-52.782,-59.261,12.042)
C4': (-52.667,-55.417,11.798)
C2': (-51.910,-53.270,11.195)
O2': (-52.163,-52.530,12.374)
N1: (-47.528,-52.146,7.935)
N2: (-47.687,-50.330,9.355)
N3: (-48.870,-52.225,9.901)
N7: (-49.178,-55.420,8.302)
N9: (-49.956,-54.395,10.134)
O5': (-53.081,-57.724,12.385)
O3': (-54.299,-53.752,11.222)
Image (generated by PyMOL):