Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02566:02565
Extra
PDB:
ATOM 1 O3' U A2565 68.275 173.944 112.711 1.00 43.97 O
ATOM 2 P A A2566 66.735 174.004 113.172 1.00 45.64 P
ATOM 3 OP1 A A2566 66.136 172.648 113.073 1.00 46.02 O
ATOM 4 OP2 A A2566 66.098 175.139 112.453 1.00 41.54 O
ATOM 5 O5' A A2566 66.816 174.408 114.712 1.00 45.38 O
ATOM 6 C5' A A2566 67.226 175.729 115.106 1.00 42.68 C
ATOM 7 C4' A A2566 66.058 176.480 115.699 1.00 43.34 C
ATOM 8 O4' A A2566 65.683 175.891 116.975 1.00 42.39 O
ATOM 9 C3' A A2566 66.334 177.928 116.051 1.00 42.53 C
ATOM 10 O3' A A2566 66.265 178.765 114.912 1.00 40.77 O
ATOM 11 C2' A A2566 65.235 178.219 117.059 1.00 42.57 C
ATOM 12 O2' A A2566 63.980 178.426 116.457 1.00 46.03 O
ATOM 13 C1' A A2566 65.209 176.908 117.845 1.00 42.86 C
ATOM 14 N9 A A2566 66.101 176.998 119.000 1.00 44.16 N
ATOM 15 C8 A A2566 67.408 176.590 119.115 1.00 43.86 C
ATOM 16 N7 A A2566 67.952 176.882 120.271 1.00 44.76 N
ATOM 17 C5 A A2566 66.931 177.513 120.970 1.00 45.18 C
ATOM 18 C6 A A2566 66.869 178.078 122.261 1.00 46.06 C
ATOM 19 N6 A A2566 67.905 178.121 123.108 1.00 44.46 N
ATOM 20 N1 A A2566 65.691 178.612 122.654 1.00 45.10 N
ATOM 21 C2 A A2566 64.660 178.590 121.801 1.00 44.94 C
ATOM 22 N3 A A2566 64.599 178.105 120.567 1.00 44.00 N
ATOM 23 C4 A A2566 65.781 177.573 120.207 1.00 44.33 C
ATOM 24 P C A2567 67.557 179.608 114.475 1.00 43.18 P
ATOM 25 OP1 C A2567 67.111 180.560 113.420 1.00 42.29 O
ATOM 26 OP2 C A2567 68.677 178.675 114.199 1.00 42.49 O
ATOM 27 O5' C A2567 67.946 180.427 115.783 1.00 43.73 O
TER
ATOM 1 O3' G B2564 69.007 171.605 117.351 1.00 41.41 O
ATOM 2 P U B2565 69.737 173.025 117.207 1.00 39.69 P
ATOM 3 OP1 U B2565 71.118 172.839 117.703 1.00 39.92 O
ATOM 4 OP2 U B2565 68.863 174.038 117.838 1.00 42.97 O
ATOM 5 O5' U B2565 69.760 173.322 115.642 1.00 41.34 O
ATOM 6 C5' U B2565 70.624 172.595 114.765 1.00 40.18 C
ATOM 7 C4' U B2565 70.397 173.010 113.331 1.00 41.28 C
ATOM 8 O4' U B2565 71.354 172.299 112.517 1.00 43.02 O
ATOM 9 C3' U B2565 69.011 172.713 112.763 1.00 43.33 C
ATOM 10 O3' U B2565 68.275 173.944 112.711 1.00 43.97 O
ATOM 11 C2' U B2565 69.288 172.263 111.328 1.00 43.95 C
ATOM 12 O2' U B2565 69.365 173.352 110.434 1.00 48.28 O
ATOM 13 C1' U B2565 70.701 171.692 111.430 1.00 43.89 C
ATOM 14 N1 U B2565 70.917 170.237 111.498 1.00 45.21 N
ATOM 15 C2 U B2565 71.662 169.672 110.467 1.00 46.91 C
ATOM 16 O2 U B2565 72.070 170.307 109.519 1.00 53.13 O
ATOM 17 N3 U B2565 71.914 168.338 110.582 1.00 43.87 N
ATOM 18 C4 U B2565 71.509 167.517 111.583 1.00 46.03 C
ATOM 19 O4 U B2565 71.876 166.346 111.560 1.00 49.27 O
ATOM 20 C5 U B2565 70.712 168.152 112.610 1.00 45.44 C
ATOM 21 C6 U B2565 70.448 169.462 112.529 1.00 41.98 C
ATOM 22 P A B2566 66.735 174.004 113.172 1.00 45.64 P
ATOM 23 OP1 A B2566 66.136 172.648 113.073 1.00 46.02 O
ATOM 24 OP2 A B2566 66.098 175.139 112.453 1.00 41.54 O
ATOM 25 O5' A B2566 66.816 174.408 114.712 1.00 45.38 O
TER
ATOM 2 P A A2566 66.735 174.004 113.172 1.00 45.64 P
ATOM 3 OP1 A A2566 66.136 172.648 113.073 1.00 46.02 O
ATOM 4 OP2 A A2566 66.098 175.139 112.453 1.00 41.54 O
ATOM 5 O5' A A2566 66.816 174.408 114.712 1.00 45.38 O
ATOM 6 C5' A A2566 67.226 175.729 115.106 1.00 42.68 C
ATOM 7 C4' A A2566 66.058 176.480 115.699 1.00 43.34 C
ATOM 8 O4' A A2566 65.683 175.891 116.975 1.00 42.39 O
ATOM 9 C3' A A2566 66.334 177.928 116.051 1.00 42.53 C
ATOM 10 O3' A A2566 66.265 178.765 114.912 1.00 40.77 O
ATOM 11 C2' A A2566 65.235 178.219 117.059 1.00 42.57 C
ATOM 12 O2' A A2566 63.980 178.426 116.457 1.00 46.03 O
ATOM 13 C1' A A2566 65.209 176.908 117.845 1.00 42.86 C
ATOM 14 N9 A A2566 66.101 176.998 119.000 1.00 44.16 N
ATOM 15 C8 A A2566 67.408 176.590 119.115 1.00 43.86 C
ATOM 16 N7 A A2566 67.952 176.882 120.271 1.00 44.76 N
ATOM 17 C5 A A2566 66.931 177.513 120.970 1.00 45.18 C
ATOM 18 C6 A A2566 66.869 178.078 122.261 1.00 46.06 C
ATOM 19 N6 A A2566 67.905 178.121 123.108 1.00 44.46 N
ATOM 20 N1 A A2566 65.691 178.612 122.654 1.00 45.10 N
ATOM 21 C2 A A2566 64.660 178.590 121.801 1.00 44.94 C
ATOM 22 N3 A A2566 64.599 178.105 120.567 1.00 44.00 N
ATOM 23 C4 A A2566 65.781 177.573 120.207 1.00 44.33 C
ATOM 24 P C A2567 67.557 179.608 114.475 1.00 43.18 P
ATOM 25 OP1 C A2567 67.111 180.560 113.420 1.00 42.29 O
ATOM 26 OP2 C A2567 68.677 178.675 114.199 1.00 42.49 O
ATOM 27 O5' C A2567 67.946 180.427 115.783 1.00 43.73 O
TER
ATOM 1 O3' G B2564 69.007 171.605 117.351 1.00 41.41 O
ATOM 2 P U B2565 69.737 173.025 117.207 1.00 39.69 P
ATOM 3 OP1 U B2565 71.118 172.839 117.703 1.00 39.92 O
ATOM 4 OP2 U B2565 68.863 174.038 117.838 1.00 42.97 O
ATOM 5 O5' U B2565 69.760 173.322 115.642 1.00 41.34 O
ATOM 6 C5' U B2565 70.624 172.595 114.765 1.00 40.18 C
ATOM 7 C4' U B2565 70.397 173.010 113.331 1.00 41.28 C
ATOM 8 O4' U B2565 71.354 172.299 112.517 1.00 43.02 O
ATOM 9 C3' U B2565 69.011 172.713 112.763 1.00 43.33 C
ATOM 10 O3' U B2565 68.275 173.944 112.711 1.00 43.97 O
ATOM 11 C2' U B2565 69.288 172.263 111.328 1.00 43.95 C
ATOM 12 O2' U B2565 69.365 173.352 110.434 1.00 48.28 O
ATOM 13 C1' U B2565 70.701 171.692 111.430 1.00 43.89 C
ATOM 14 N1 U B2565 70.917 170.237 111.498 1.00 45.21 N
ATOM 15 C2 U B2565 71.662 169.672 110.467 1.00 46.91 C
ATOM 16 O2 U B2565 72.070 170.307 109.519 1.00 53.13 O
ATOM 17 N3 U B2565 71.914 168.338 110.582 1.00 43.87 N
ATOM 18 C4 U B2565 71.509 167.517 111.583 1.00 46.03 C
ATOM 19 O4 U B2565 71.876 166.346 111.560 1.00 49.27 O
ATOM 20 C5 U B2565 70.712 168.152 112.610 1.00 45.44 C
ATOM 21 C6 U B2565 70.448 169.462 112.529 1.00 41.98 C
ATOM 22 P A B2566 66.735 174.004 113.172 1.00 45.64 P
ATOM 23 OP1 A B2566 66.136 172.648 113.073 1.00 46.02 O
ATOM 24 OP2 A B2566 66.098 175.139 112.453 1.00 41.54 O
ATOM 25 O5' A B2566 66.816 174.408 114.712 1.00 45.38 O
TER
Atoms:
OP1: (66.136,172.648,113.073)
OP2: (66.098,175.139,112.453)
C3': (66.334,177.928,116.051)
C1': (65.209,176.908,117.845)
C5': (67.226,175.729,115.106)
O4': (65.683,175.891,116.975)
C8: (67.408,176.590,119.115)
O2': (63.980,178.426,116.457)
C6: (66.869,178.078,122.261)
C5: (66.931,177.513,120.970)
C4: (65.781,177.573,120.207)
P: (66.735,174.004,113.172)
C4': (66.058,176.480,115.699)
C2': (65.235,178.219,117.059)
C2: (64.660,178.590,121.801)
N1: (65.691,178.612,122.654)
N3: (64.599,178.105,120.567)
N6: (67.905,178.121,123.108)
N7: (67.952,176.882,120.271)
N9: (66.101,176.998,119.000)
O5': (66.816,174.408,114.712)
O3': (66.265,178.765,114.912)
OP2: (66.098,175.139,112.453)
C3': (66.334,177.928,116.051)
C1': (65.209,176.908,117.845)
C5': (67.226,175.729,115.106)
O4': (65.683,175.891,116.975)
C8: (67.408,176.590,119.115)
O2': (63.980,178.426,116.457)
C6: (66.869,178.078,122.261)
C5: (66.931,177.513,120.970)
C4: (65.781,177.573,120.207)
P: (66.735,174.004,113.172)
C4': (66.058,176.480,115.699)
C2': (65.235,178.219,117.059)
C2: (64.660,178.590,121.801)
N1: (65.691,178.612,122.654)
N3: (64.599,178.105,120.567)
N6: (67.905,178.121,123.108)
N7: (67.952,176.882,120.271)
N9: (66.101,176.998,119.000)
O5': (66.816,174.408,114.712)
O3': (66.265,178.765,114.912)
C4: (71.509,167.517,111.583)
N3: (71.914,168.338,110.582)
OP1: (71.118,172.839,117.703)
OP2: (68.863,174.038,117.838)
C2: (71.662,169.672,110.467)
C1': (70.701,171.692,111.430)
C3': (69.011,172.713,112.763)
O5': (69.760,173.322,115.642)
O4': (71.354,172.299,112.517)
C5': (70.624,172.595,114.765)
P: (69.737,173.025,117.207)
C4': (70.397,173.010,113.331)
C2': (69.288,172.263,111.328)
O2': (69.365,173.352,110.434)
N1: (70.917,170.237,111.498)
O4: (71.876,166.346,111.560)
O2: (72.070,170.307,109.519)
C6: (70.448,169.462,112.529)
C5: (70.712,168.152,112.610)
O3': (68.275,173.944,112.711)
N3: (71.914,168.338,110.582)
OP1: (71.118,172.839,117.703)
OP2: (68.863,174.038,117.838)
C2: (71.662,169.672,110.467)
C1': (70.701,171.692,111.430)
C3': (69.011,172.713,112.763)
O5': (69.760,173.322,115.642)
O4': (71.354,172.299,112.517)
C5': (70.624,172.595,114.765)
P: (69.737,173.025,117.207)
C4': (70.397,173.010,113.331)
C2': (69.288,172.263,111.328)
O2': (69.365,173.352,110.434)
N1: (70.917,170.237,111.498)
O4: (71.876,166.346,111.560)
O2: (72.070,170.307,109.519)
C6: (70.448,169.462,112.529)
C5: (70.712,168.152,112.610)
O3': (68.275,173.944,112.711)
Image (generated by PyMOL):