ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A186:A404

Extra

PDB:
ATOM 1 O3' C A 185 63.717 81.400 25.456 1.00 66.89 O
ATOM 2 P A A 186 63.316 80.186 24.463 1.00 68.45 P
ATOM 3 OP1 A A 186 61.883 80.371 24.095 1.00 67.65 O
ATOM 4 OP2 A A 186 63.756 78.915 25.096 1.00 68.19 O
ATOM 5 O5' A A 186 64.193 80.405 23.150 1.00 67.15 O
ATOM 6 C5' A A 186 65.502 80.981 23.211 1.00 67.64 C
ATOM 7 C4' A A 186 66.490 80.121 22.461 1.00 69.81 C
ATOM 8 O4' A A 186 67.691 80.908 22.220 1.00 70.68 O
ATOM 9 C3' A A 186 66.949 78.853 23.186 1.00 70.56 C
ATOM 10 O3' A A 186 67.268 77.816 22.240 1.00 72.92 O
ATOM 11 C2' A A 186 68.245 79.325 23.848 1.00 70.64 C
ATOM 12 O2' A A 186 69.149 78.287 24.167 1.00 68.79 O
ATOM 13 C1' A A 186 68.809 80.223 22.751 1.00 71.69 C
ATOM 14 N9 A A 186 69.830 81.196 23.152 1.00 73.68 N
ATOM 15 C8 A A 186 69.781 82.140 24.150 1.00 74.56 C
ATOM 16 N7 A A 186 70.872 82.868 24.243 1.00 74.76 N
ATOM 17 C5 A A 186 71.695 82.368 23.245 1.00 74.68 C
ATOM 18 C6 A A 186 72.993 82.716 22.821 1.00 75.15 C
ATOM 19 N6 A A 186 73.711 83.704 23.361 1.00 75.39 N
ATOM 20 N1 A A 186 73.528 82.014 21.802 1.00 74.88 N
ATOM 21 C2 A A 186 72.799 81.045 21.241 1.00 74.92 C
ATOM 22 N3 A A 186 71.570 80.632 21.541 1.00 74.86 N
ATOM 23 C4 A A 186 71.069 81.338 22.565 1.00 74.38 C
ATOM 24 P A A 187 66.130 76.784 21.727 1.00 72.79 P
ATOM 25 OP1 A A 187 64.990 76.737 22.684 1.00 73.22 O
ATOM 26 OP2 A A 187 66.830 75.527 21.377 1.00 72.83 O
ATOM 27 O5' A A 187 65.612 77.446 20.377 1.00 72.50 O
TER

ATOM 1 O3' A B 403 79.486 90.301 26.844 1.00 60.14 O
ATOM 2 P G B 404 79.191 89.031 27.799 1.00 60.49 P
ATOM 3 OP1 G B 404 78.592 89.531 29.071 1.00 61.10 O
ATOM 4 OP2 G B 404 80.436 88.214 27.846 1.00 59.38 O
ATOM 5 O5' G B 404 78.043 88.218 27.047 1.00 61.23 O
ATOM 6 C5' G B 404 76.693 88.728 26.981 1.00 62.24 C
ATOM 7 C4' G B 404 75.769 87.690 26.372 1.00 62.57 C
ATOM 8 O4' G B 404 76.119 87.471 24.980 1.00 62.21 O
ATOM 9 C3' G B 404 75.827 86.319 27.032 1.00 62.42 C
ATOM 10 O3' G B 404 74.916 86.294 28.143 1.00 61.92 O
ATOM 11 C2' G B 404 75.396 85.389 25.898 1.00 62.89 C
ATOM 12 O2' G B 404 73.990 85.299 25.751 1.00 63.28 O
ATOM 13 C1' G B 404 75.964 86.105 24.662 1.00 63.37 C
ATOM 14 N9 G B 404 77.250 85.601 24.189 1.00 64.85 N
ATOM 15 C8 G B 404 78.504 86.025 24.576 1.00 65.57 C
ATOM 16 N7 G B 404 79.473 85.362 23.997 1.00 65.45 N
ATOM 17 C5 G B 404 78.823 84.449 23.170 1.00 65.54 C
ATOM 18 C6 G B 404 79.349 83.439 22.296 1.00 65.76 C
ATOM 19 O6 G B 404 80.535 83.158 22.051 1.00 66.05 O
ATOM 20 N1 G B 404 78.330 82.718 21.678 1.00 65.47 N
ATOM 21 C2 G B 404 76.984 82.935 21.857 1.00 65.47 C
ATOM 22 N2 G B 404 76.167 82.110 21.206 1.00 66.24 N
ATOM 23 N3 G B 404 76.478 83.882 22.632 1.00 65.67 N
ATOM 24 C4 G B 404 77.449 84.590 23.268 1.00 65.86 C
ATOM 25 P G B 405 75.420 85.845 29.612 1.00 61.56 P
ATOM 26 OP1 G B 405 76.413 84.741 29.455 1.00 61.70 O
ATOM 27 OP2 G B 405 74.204 85.640 30.438 1.00 62.79 O
ATOM 28 O5' G B 405 76.149 87.105 30.261 1.00 61.41 O
TER

Atoms:
OP1: (61.883,80.371,24.095)
OP2: (63.756,78.915,25.096)
C3': (66.949,78.853,23.186)
C1': (68.809,80.223,22.751)
C5': (65.502,80.981,23.211)
O4': (67.691,80.908,22.220)
C8: (69.781,82.140,24.150)
O2': (69.149,78.287,24.167)
C6: (72.993,82.716,22.821)
C5: (71.695,82.368,23.245)
C4: (71.069,81.338,22.565)
P: (63.316,80.186,24.463)
C4': (66.490,80.121,22.461)
C2': (68.245,79.325,23.848)
C2: (72.799,81.045,21.241)
N1: (73.528,82.014,21.802)
N3: (71.570,80.632,21.541)
N6: (73.711,83.704,23.361)
N7: (70.872,82.868,24.243)
N9: (69.830,81.196,23.152)
O5': (64.193,80.405,23.150)
O3': (67.268,77.816,22.240)
OP1: (78.592,89.531,29.071)
OP2: (80.436,88.214,27.846)
C3': (75.827,86.319,27.032)
C1': (75.964,86.105,24.662)
C5': (76.693,88.728,26.981)
O6: (80.535,83.158,22.051)
O4': (76.119,87.471,24.980)
C8: (78.504,86.025,24.576)
C2: (76.984,82.935,21.857)
C6: (79.349,83.439,22.296)
C5: (78.823,84.449,23.170)
C4: (77.449,84.590,23.268)
P: (79.191,89.031,27.799)
C4': (75.769,87.690,26.372)
C2': (75.396,85.389,25.898)
O2': (73.990,85.299,25.751)
N1: (78.330,82.718,21.678)
N2: (76.167,82.110,21.206)
N3: (76.478,83.882,22.632)
N7: (79.473,85.362,23.997)
N9: (77.250,85.601,24.189)
O5': (78.043,88.218,27.047)
O3': (74.916,86.294,28.143)
Image (generated by PyMOL):
PyMOL image
show in jmol