ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUM:R26:R24

Extra

PDB:
ATOM 1 O3' A A 25 3.889 -1.755 -22.145 1.00 39.84 O
ATOM 2 P A A 26 4.195 -1.636 -20.583 1.00 38.03 P
ATOM 3 OP1 A A 26 5.350 -0.734 -20.358 1.00 37.44 O
ATOM 4 OP2 A A 26 4.247 -3.023 -20.057 1.00 35.99 O
ATOM 5 O5' A A 26 2.872 -0.885 -20.089 1.00 35.20 O
ATOM 6 C5' A A 26 2.773 0.524 -20.308 1.00 34.96 C
ATOM 7 C4' A A 26 1.333 1.002 -20.270 1.00 34.85 C
ATOM 8 O4' A A 26 0.495 0.035 -20.940 1.00 36.14 O
ATOM 9 C3' A A 26 0.740 1.128 -18.879 1.00 35.41 C
ATOM 10 O3' A A 26 0.973 2.435 -18.388 1.00 37.14 O
ATOM 11 C2' A A 26 -0.746 0.864 -19.106 1.00 34.86 C
ATOM 12 O2' A A 26 -1.457 2.010 -19.535 1.00 36.09 O
ATOM 13 C1' A A 26 -0.725 -0.142 -20.242 1.00 32.31 C
ATOM 14 N9 A A 26 -0.849 -1.550 -19.872 1.00 27.53 N
ATOM 15 C8 A A 26 0.148 -2.487 -19.838 1.00 27.15 C
ATOM 16 N7 A A 26 -0.260 -3.690 -19.499 1.00 25.53 N
ATOM 17 C5 A A 26 -1.615 -3.532 -19.304 1.00 23.87 C
ATOM 18 C6 A A 26 -2.625 -4.433 -18.924 1.00 24.21 C
ATOM 19 N6 A A 26 -2.397 -5.720 -18.671 1.00 24.74 N
ATOM 20 N1 A A 26 -3.886 -3.963 -18.815 1.00 26.25 N
ATOM 21 C2 A A 26 -4.114 -2.663 -19.067 1.00 27.40 C
ATOM 22 N3 A A 26 -3.239 -1.719 -19.427 1.00 26.89 N
ATOM 23 C4 A A 26 -1.997 -2.222 -19.528 1.00 25.17 C
ATOM 24 P A A 27 1.204 2.688 -16.823 1.00 36.92 P
ATOM 25 OP1 A A 27 1.574 4.114 -16.662 1.00 37.36 O
ATOM 26 OP2 A A 27 2.115 1.628 -16.318 1.00 34.84 O
ATOM 27 O5' A A 27 -0.256 2.459 -16.207 1.00 31.76 O
TER

ATOM 1 O3' C B 23 5.654 -10.622 -17.489 1.00 37.02 O
ATOM 2 P G B 24 6.157 -10.095 -18.916 1.00 36.98 P
ATOM 3 OP1 G B 24 6.231 -11.269 -19.815 1.00 37.51 O
ATOM 4 OP2 G B 24 7.352 -9.239 -18.708 1.00 35.31 O
ATOM 5 O5' G B 24 4.972 -9.145 -19.397 1.00 34.96 O
ATOM 6 C5' G B 24 3.627 -9.554 -19.229 1.00 35.25 C
ATOM 7 C4' G B 24 2.733 -8.347 -19.043 1.00 36.05 C
ATOM 8 O4' G B 24 3.003 -7.731 -17.762 1.00 34.06 O
ATOM 9 C3' G B 24 2.977 -7.185 -19.991 1.00 38.10 C
ATOM 10 O3' G B 24 2.502 -7.437 -21.310 1.00 42.05 O
ATOM 11 C2' G B 24 2.182 -6.110 -19.261 1.00 35.17 C
ATOM 12 O2' G B 24 0.779 -6.279 -19.369 1.00 35.57 O
ATOM 13 C1' G B 24 2.656 -6.359 -17.829 1.00 32.26 C
ATOM 14 N9 G B 24 3.809 -5.518 -17.507 1.00 30.92 N
ATOM 15 C8 G B 24 5.142 -5.865 -17.512 1.00 30.49 C
ATOM 16 N7 G B 24 5.939 -4.879 -17.200 1.00 28.92 N
ATOM 17 C5 G B 24 5.082 -3.806 -16.976 1.00 29.27 C
ATOM 18 C6 G B 24 5.362 -2.464 -16.611 1.00 29.77 C
ATOM 19 O6 G B 24 6.469 -1.941 -16.401 1.00 32.21 O
ATOM 20 N1 G B 24 4.201 -1.698 -16.491 1.00 27.51 N
ATOM 21 C2 G B 24 2.927 -2.172 -16.699 1.00 29.33 C
ATOM 22 N2 G B 24 1.922 -1.298 -16.536 1.00 32.21 N
ATOM 23 N3 G B 24 2.653 -3.421 -17.047 1.00 29.68 N
ATOM 24 C4 G B 24 3.771 -4.183 -17.165 1.00 29.93 C
ATOM 25 P A B 25 3.379 -6.988 -22.577 1.00 45.10 P
ATOM 26 OP1 A B 25 2.448 -6.911 -23.724 1.00 45.91 O
ATOM 27 OP2 A B 25 4.573 -7.858 -22.636 1.00 44.57 O
ATOM 28 O5' A B 25 3.893 -5.511 -22.237 1.00 45.48 O
TER

Atoms:
OP1: (5.350,-0.734,-20.358)
OP2: (4.247,-3.023,-20.057)
C3': (0.740,1.128,-18.879)
C1': (-0.725,-0.142,-20.242)
C5': (2.773,0.524,-20.308)
O4': (0.495,0.035,-20.940)
C8: (0.148,-2.487,-19.838)
O2': (-1.457,2.010,-19.535)
C6: (-2.625,-4.433,-18.924)
C5: (-1.615,-3.532,-19.304)
C4: (-1.997,-2.222,-19.528)
P: (4.195,-1.636,-20.583)
C4': (1.333,1.002,-20.270)
C2': (-0.746,0.864,-19.106)
C2: (-4.114,-2.663,-19.067)
N1: (-3.886,-3.963,-18.815)
N3: (-3.239,-1.719,-19.427)
N6: (-2.397,-5.720,-18.671)
N7: (-0.260,-3.690,-19.499)
N9: (-0.849,-1.550,-19.872)
O5': (2.872,-0.885,-20.089)
O3': (0.973,2.435,-18.388)
OP1: (6.231,-11.269,-19.815)
OP2: (7.352,-9.239,-18.708)
C3': (2.977,-7.185,-19.991)
C1': (2.656,-6.359,-17.829)
C5': (3.627,-9.554,-19.229)
O6: (6.469,-1.941,-16.401)
O4': (3.003,-7.731,-17.762)
C8: (5.142,-5.865,-17.512)
C2: (2.927,-2.172,-16.699)
C6: (5.362,-2.464,-16.611)
C5: (5.082,-3.806,-16.976)
C4: (3.771,-4.183,-17.165)
P: (6.157,-10.095,-18.916)
C4': (2.733,-8.347,-19.043)
C2': (2.182,-6.110,-19.261)
O2': (0.779,-6.279,-19.369)
N1: (4.201,-1.698,-16.491)
N2: (1.922,-1.298,-16.536)
N3: (2.653,-3.421,-17.047)
N7: (5.939,-4.879,-17.200)
N9: (3.809,-5.518,-17.507)
O5': (4.972,-9.145,-19.397)
O3': (2.502,-7.437,-21.310)
Image (generated by PyMOL):
PyMOL image
show in jmol