ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NUF:C13:C11

Extra

PDB:
ATOM 1 O3' C A 12 -0.671 17.869 -8.242 1.00 74.25 O
ATOM 2 P A A 13 -1.391 17.408 -6.884 1.00 78.69 P
ATOM 3 OP1 A A 13 -2.791 17.904 -6.901 1.00 78.86 O
ATOM 4 OP2 A A 13 -0.482 17.817 -5.779 1.00 75.61 O
ATOM 5 O5' A A 13 -1.415 15.813 -6.963 1.00 81.85 O
ATOM 6 C5' A A 13 -2.255 15.129 -7.896 1.00 82.50 C
ATOM 7 C4' A A 13 -1.769 13.706 -8.108 1.00 84.13 C
ATOM 8 O4' A A 13 -0.389 13.737 -8.572 1.00 81.14 O
ATOM 9 C3' A A 13 -1.756 12.805 -6.878 1.00 83.02 C
ATOM 10 O3' A A 13 -3.027 12.168 -6.707 1.00 87.84 O
ATOM 11 C2' A A 13 -0.655 11.807 -7.220 1.00 80.01 C
ATOM 12 O2' A A 13 -1.089 10.780 -8.089 1.00 75.26 O
ATOM 13 C1' A A 13 0.347 12.697 -7.960 1.00 77.57 C
ATOM 14 N9 A A 13 1.369 13.322 -7.120 1.00 75.57 N
ATOM 15 C8 A A 13 1.329 14.574 -6.554 1.00 74.16 C
ATOM 16 N7 A A 13 2.428 14.904 -5.919 1.00 71.71 N
ATOM 17 C5 A A 13 3.239 13.786 -6.058 1.00 69.81 C
ATOM 18 C6 A A 13 4.545 13.510 -5.628 1.00 64.88 C
ATOM 19 N6 A A 13 5.303 14.380 -4.962 1.00 66.61 N
ATOM 20 N1 A A 13 5.058 12.300 -5.920 1.00 63.06 N
ATOM 21 C2 A A 13 4.304 11.435 -6.608 1.00 71.19 C
ATOM 22 N3 A A 13 3.068 11.581 -7.081 1.00 69.51 N
ATOM 23 C4 A A 13 2.588 12.794 -6.772 1.00 72.62 C
ATOM 24 P A A 14 -3.476 11.645 -5.249 1.00 94.05 P
ATOM 25 OP1 A A 14 -4.787 10.950 -5.384 1.00 82.57 O
ATOM 26 OP2 A A 14 -3.340 12.763 -4.268 1.00 91.23 O
ATOM 27 O5' A A 14 -2.368 10.551 -4.903 1.00 91.42 O
TER

ATOM 1 O3' C B 10 4.033 22.863 -0.249 1.00 66.49 O
ATOM 2 P G B 11 3.719 23.126 -1.798 1.00 66.29 P
ATOM 3 OP1 G B 11 4.925 23.797 -2.330 1.00 68.63 O
ATOM 4 OP2 G B 11 2.392 23.788 -1.919 1.00 70.96 O
ATOM 5 O5' G B 11 3.611 21.667 -2.433 1.00 63.06 O
ATOM 6 C5' G B 11 4.788 20.914 -2.691 1.00 62.94 C
ATOM 7 C4' G B 11 4.450 19.518 -3.167 1.00 62.55 C
ATOM 8 O4' G B 11 3.720 18.800 -2.137 1.00 63.30 O
ATOM 9 C3' G B 11 3.556 19.389 -4.385 1.00 63.54 C
ATOM 10 O3' G B 11 4.278 19.602 -5.588 1.00 66.24 O
ATOM 11 C2' G B 11 3.096 17.944 -4.257 1.00 60.57 C
ATOM 12 O2' G B 11 4.065 17.011 -4.682 1.00 59.74 O
ATOM 13 C1' G B 11 2.873 17.839 -2.746 1.00 58.25 C
ATOM 14 N9 G B 11 1.492 18.199 -2.463 1.00 52.41 N
ATOM 15 C8 G B 11 1.004 19.429 -2.095 1.00 50.64 C
ATOM 16 N7 G B 11 -0.301 19.470 -2.061 1.00 51.93 N
ATOM 17 C5 G B 11 -0.691 18.180 -2.406 1.00 54.18 C
ATOM 18 C6 G B 11 -1.986 17.621 -2.582 1.00 51.04 C
ATOM 19 O6 G B 11 -3.085 18.184 -2.519 1.00 59.58 O
ATOM 20 N1 G B 11 -1.921 16.266 -2.886 1.00 46.47 N
ATOM 21 C2 G B 11 -0.762 15.543 -3.034 1.00 54.44 C
ATOM 22 N2 G B 11 -0.901 14.229 -3.304 1.00 56.60 N
ATOM 23 N3 G B 11 0.448 16.062 -2.918 1.00 55.87 N
ATOM 24 C4 G B 11 0.407 17.375 -2.604 1.00 53.30 C
ATOM 25 P C B 12 4.032 20.947 -6.435 1.00 75.58 P
ATOM 26 OP1 C B 12 5.329 21.244 -7.088 1.00 78.70 O
ATOM 27 OP2 C B 12 3.389 21.980 -5.572 1.00 70.12 O
ATOM 28 O5' C B 12 3.006 20.535 -7.584 1.00 71.79 O
TER

Atoms:
OP1: (-2.791,17.904,-6.901)
OP2: (-0.482,17.817,-5.779)
C3': (-1.756,12.805,-6.878)
C1': (0.347,12.697,-7.960)
C5': (-2.255,15.129,-7.896)
O4': (-0.389,13.737,-8.572)
C8: (1.329,14.574,-6.554)
O2': (-1.089,10.780,-8.089)
C6: (4.545,13.510,-5.628)
C5: (3.239,13.786,-6.058)
C4: (2.588,12.794,-6.772)
P: (-1.391,17.408,-6.884)
C4': (-1.769,13.706,-8.108)
C2': (-0.655,11.807,-7.220)
C2: (4.304,11.435,-6.608)
N1: (5.058,12.300,-5.920)
N3: (3.068,11.581,-7.081)
N6: (5.303,14.380,-4.962)
N7: (2.428,14.904,-5.919)
N9: (1.369,13.322,-7.120)
O5': (-1.415,15.813,-6.963)
O3': (-3.027,12.168,-6.707)
OP1: (4.925,23.797,-2.330)
OP2: (2.392,23.788,-1.919)
C3': (3.556,19.389,-4.385)
C1': (2.873,17.839,-2.746)
C5': (4.788,20.914,-2.691)
O6: (-3.085,18.184,-2.519)
O4': (3.720,18.800,-2.137)
C8: (1.004,19.429,-2.095)
C2: (-0.762,15.543,-3.034)
C6: (-1.986,17.621,-2.582)
C5: (-0.691,18.180,-2.406)
C4: (0.407,17.375,-2.604)
P: (3.719,23.126,-1.798)
C4': (4.450,19.518,-3.167)
C2': (3.096,17.944,-4.257)
O2': (4.065,17.011,-4.682)
N1: (-1.921,16.266,-2.886)
N2: (-0.901,14.229,-3.304)
N3: (0.448,16.062,-2.918)
N7: (-0.301,19.470,-2.061)
N9: (1.492,18.199,-2.463)
O5': (3.611,21.667,-2.433)
O3': (4.278,19.602,-5.588)
Image (generated by PyMOL):
PyMOL image
show in jmol