ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01943:01942

Extra

PDB:
ATOM 1 O3' U A1942 92.946 125.030 117.571 1.00 39.34 O
ATOM 2 P A A1943 94.401 125.544 117.175 1.00 44.26 P
ATOM 3 OP1 A A1943 94.868 124.805 115.973 1.00 45.15 O
ATOM 4 OP2 A A1943 95.216 125.521 118.411 1.00 46.88 O
ATOM 5 O5' A A1943 94.157 127.060 116.769 1.00 43.26 O
ATOM 6 C5' A A1943 93.147 127.403 115.823 1.00 41.46 C
ATOM 7 C4' A A1943 93.119 128.888 115.614 1.00 39.58 C
ATOM 8 O4' A A1943 92.739 129.549 116.845 1.00 37.59 O
ATOM 9 C3' A A1943 94.445 129.524 115.255 1.00 38.58 C
ATOM 10 O3' A A1943 94.737 129.379 113.875 1.00 39.44 O
ATOM 11 C2' A A1943 94.196 130.975 115.627 1.00 40.50 C
ATOM 12 O2' A A1943 93.422 131.657 114.666 1.00 44.26 O
ATOM 13 C1' A A1943 93.367 130.818 116.903 1.00 39.98 C
ATOM 14 N9 A A1943 94.186 130.887 118.113 1.00 41.05 N
ATOM 15 C8 A A1943 94.295 129.963 119.123 1.00 41.59 C
ATOM 16 N7 A A1943 95.106 130.325 120.082 1.00 42.22 N
ATOM 17 C5 A A1943 95.569 131.571 119.678 1.00 41.43 C
ATOM 18 C6 A A1943 96.471 132.484 120.259 1.00 41.13 C
ATOM 19 N6 A A1943 97.111 132.265 121.411 1.00 41.00 N
ATOM 20 N1 A A1943 96.707 133.637 119.600 1.00 39.53 N
ATOM 21 C2 A A1943 96.089 133.841 118.427 1.00 39.86 C
ATOM 22 N3 A A1943 95.237 133.058 117.775 1.00 38.93 N
ATOM 23 C4 A A1943 95.012 131.927 118.465 1.00 40.17 C
ATOM 24 P G A1944 96.226 128.999 113.411 1.00 41.29 P
ATOM 25 OP1 G A1944 96.261 128.959 111.927 1.00 41.21 O
ATOM 26 OP2 G A1944 96.637 127.806 114.178 1.00 42.55 O
ATOM 27 O5' G A1944 97.094 130.249 113.872 1.00 43.08 O
TER

ATOM 1 O3' G B1941 93.194 128.701 122.716 1.00 40.69 O
ATOM 2 P U B1942 93.972 127.346 122.360 1.00 41.63 P
ATOM 3 OP1 U B1942 93.644 126.363 123.413 1.00 41.20 O
ATOM 4 OP2 U B1942 95.391 127.647 122.058 1.00 40.23 O
ATOM 5 O5' U B1942 93.302 126.873 120.995 1.00 42.71 O
ATOM 6 C5' U B1942 92.093 126.080 120.973 1.00 41.30 C
ATOM 7 C4' U B1942 92.129 125.140 119.792 1.00 39.57 C
ATOM 8 O4' U B1942 90.955 124.285 119.786 1.00 40.07 O
ATOM 9 C3' U B1942 92.155 125.814 118.427 1.00 38.31 C
ATOM 10 O3' U B1942 92.946 125.030 117.571 1.00 39.34 O
ATOM 11 C2' U B1942 90.711 125.709 117.967 1.00 38.60 C
ATOM 12 O2' U B1942 90.579 125.751 116.564 1.00 36.84 O
ATOM 13 C1' U B1942 90.355 124.333 118.510 1.00 38.26 C
ATOM 14 N1 U B1942 88.923 124.024 118.632 1.00 37.51 N
ATOM 15 C2 U B1942 88.459 122.923 117.938 1.00 37.77 C
ATOM 16 O2 U B1942 89.185 122.203 117.270 1.00 37.78 O
ATOM 17 N3 U B1942 87.115 122.687 118.059 1.00 37.26 N
ATOM 18 C4 U B1942 86.213 123.411 118.794 1.00 36.40 C
ATOM 19 O4 U B1942 85.038 123.059 118.809 1.00 37.48 O
ATOM 20 C5 U B1942 86.768 124.524 119.496 1.00 36.20 C
ATOM 21 C6 U B1942 88.071 124.788 119.393 1.00 36.17 C
ATOM 22 P A B1943 94.401 125.544 117.175 1.00 44.26 P
ATOM 23 OP1 A B1943 94.868 124.805 115.973 1.00 45.15 O
ATOM 24 OP2 A B1943 95.216 125.521 118.411 1.00 46.88 O
ATOM 25 O5' A B1943 94.157 127.060 116.769 1.00 43.26 O
TER

Atoms:
OP1: (94.868,124.805,115.973)
OP2: (95.216,125.521,118.411)
C3': (94.445,129.524,115.255)
C1': (93.367,130.818,116.903)
C5': (93.147,127.403,115.823)
O4': (92.739,129.549,116.845)
C8: (94.295,129.963,119.123)
O2': (93.422,131.657,114.666)
C6: (96.471,132.484,120.259)
C5: (95.569,131.571,119.678)
C4: (95.012,131.927,118.465)
P: (94.401,125.544,117.175)
C4': (93.119,128.888,115.614)
C2': (94.196,130.975,115.627)
C2: (96.089,133.841,118.427)
N1: (96.707,133.637,119.600)
N3: (95.237,133.058,117.775)
N6: (97.111,132.265,121.411)
N7: (95.106,130.325,120.082)
N9: (94.186,130.887,118.113)
O5': (94.157,127.060,116.769)
O3': (94.737,129.379,113.875)
C4: (86.213,123.411,118.794)
N3: (87.115,122.687,118.059)
OP1: (93.644,126.363,123.413)
OP2: (95.391,127.647,122.058)
C2: (88.459,122.923,117.938)
C1': (90.355,124.333,118.510)
C3': (92.155,125.814,118.427)
O5': (93.302,126.873,120.995)
O4': (90.955,124.285,119.786)
C5': (92.093,126.080,120.973)
P: (93.972,127.346,122.360)
C4': (92.129,125.140,119.792)
C2': (90.711,125.709,117.967)
O2': (90.579,125.751,116.564)
N1: (88.923,124.024,118.632)
O4: (85.038,123.059,118.809)
O2: (89.185,122.203,117.270)
C6: (88.071,124.788,119.393)
C5: (86.768,124.524,119.496)
O3': (92.946,125.030,117.571)
Image (generated by PyMOL):
PyMOL image
show in jmol