Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02566:02565
Extra
PDB:
ATOM 1 O3' U A2565 68.365 173.946 112.696 1.00 50.66 O
ATOM 2 P A A2566 66.797 173.991 113.078 1.00 50.67 P
ATOM 3 OP1 A A2566 66.195 172.649 112.889 1.00 52.07 O
ATOM 4 OP2 A A2566 66.223 175.160 112.363 1.00 46.82 O
ATOM 5 O5' A A2566 66.775 174.327 114.637 1.00 50.38 O
ATOM 6 C5' A A2566 67.270 175.589 115.124 1.00 49.84 C
ATOM 7 C4' A A2566 66.130 176.424 115.656 1.00 49.87 C
ATOM 8 O4' A A2566 65.700 175.903 116.942 1.00 49.83 O
ATOM 9 C3' A A2566 66.468 177.873 115.960 1.00 48.85 C
ATOM 10 O3' A A2566 66.417 178.679 114.796 1.00 47.89 O
ATOM 11 C2' A A2566 65.365 178.251 116.930 1.00 49.95 C
ATOM 12 O2' A A2566 64.145 178.512 116.270 1.00 50.90 O
ATOM 13 C1' A A2566 65.263 176.974 117.766 1.00 50.53 C
ATOM 14 N9 A A2566 66.153 177.068 118.921 1.00 51.40 N
ATOM 15 C8 A A2566 67.458 176.656 119.021 1.00 51.61 C
ATOM 16 N7 A A2566 68.018 176.951 120.166 1.00 52.80 N
ATOM 17 C5 A A2566 67.009 177.587 120.877 1.00 52.59 C
ATOM 18 C6 A A2566 66.969 178.155 122.166 1.00 52.95 C
ATOM 19 N6 A A2566 68.015 178.189 123.000 1.00 52.25 N
ATOM 20 N1 A A2566 65.800 178.698 122.573 1.00 53.09 N
ATOM 21 C2 A A2566 64.755 178.670 121.737 1.00 52.16 C
ATOM 22 N3 A A2566 64.674 178.177 120.507 1.00 51.64 N
ATOM 23 C4 A A2566 65.849 177.645 120.130 1.00 52.00 C
ATOM 24 P C A2567 67.692 179.558 114.385 1.00 46.86 P
ATOM 25 OP1 C A2567 67.233 180.511 113.340 1.00 45.99 O
ATOM 26 OP2 C A2567 68.821 178.642 114.100 1.00 46.66 O
ATOM 27 O5' C A2567 68.064 180.352 115.707 1.00 46.87 O
TER
ATOM 1 O3' G B2564 68.910 171.657 117.422 1.00 45.69 O
ATOM 2 P U B2565 69.674 173.056 117.212 1.00 46.11 P
ATOM 3 OP1 U B2565 71.082 172.878 117.648 1.00 44.30 O
ATOM 4 OP2 U B2565 68.850 174.123 117.819 1.00 46.58 O
ATOM 5 O5' U B2565 69.677 173.277 115.639 1.00 44.63 O
ATOM 6 C5' U B2565 70.596 172.566 114.817 1.00 45.27 C
ATOM 7 C4' U B2565 70.462 172.984 113.379 1.00 47.44 C
ATOM 8 O4' U B2565 71.448 172.241 112.633 1.00 47.97 O
ATOM 9 C3' U B2565 69.105 172.708 112.733 1.00 49.80 C
ATOM 10 O3' U B2565 68.365 173.946 112.696 1.00 50.66 O
ATOM 11 C2' U B2565 69.469 172.294 111.307 1.00 51.26 C
ATOM 12 O2' U B2565 69.634 173.402 110.448 1.00 54.55 O
ATOM 13 C1' U B2565 70.860 171.681 111.487 1.00 51.22 C
ATOM 14 N1 U B2565 71.014 170.218 111.548 1.00 53.59 N
ATOM 15 C2 U B2565 71.733 169.615 110.513 1.00 55.45 C
ATOM 16 O2 U B2565 72.183 170.234 109.568 1.00 58.32 O
ATOM 17 N3 U B2565 71.909 168.264 110.627 1.00 54.20 N
ATOM 18 C4 U B2565 71.459 167.461 111.634 1.00 56.22 C
ATOM 19 O4 U B2565 71.732 166.262 111.598 1.00 57.89 O
ATOM 20 C5 U B2565 70.704 168.140 112.667 1.00 55.22 C
ATOM 21 C6 U B2565 70.508 169.463 112.584 1.00 52.70 C
ATOM 22 P A B2566 66.797 173.991 113.078 1.00 50.67 P
ATOM 23 OP1 A B2566 66.195 172.649 112.889 1.00 52.07 O
ATOM 24 OP2 A B2566 66.223 175.160 112.363 1.00 46.82 O
ATOM 25 O5' A B2566 66.775 174.327 114.637 1.00 50.38 O
TER
ATOM 2 P A A2566 66.797 173.991 113.078 1.00 50.67 P
ATOM 3 OP1 A A2566 66.195 172.649 112.889 1.00 52.07 O
ATOM 4 OP2 A A2566 66.223 175.160 112.363 1.00 46.82 O
ATOM 5 O5' A A2566 66.775 174.327 114.637 1.00 50.38 O
ATOM 6 C5' A A2566 67.270 175.589 115.124 1.00 49.84 C
ATOM 7 C4' A A2566 66.130 176.424 115.656 1.00 49.87 C
ATOM 8 O4' A A2566 65.700 175.903 116.942 1.00 49.83 O
ATOM 9 C3' A A2566 66.468 177.873 115.960 1.00 48.85 C
ATOM 10 O3' A A2566 66.417 178.679 114.796 1.00 47.89 O
ATOM 11 C2' A A2566 65.365 178.251 116.930 1.00 49.95 C
ATOM 12 O2' A A2566 64.145 178.512 116.270 1.00 50.90 O
ATOM 13 C1' A A2566 65.263 176.974 117.766 1.00 50.53 C
ATOM 14 N9 A A2566 66.153 177.068 118.921 1.00 51.40 N
ATOM 15 C8 A A2566 67.458 176.656 119.021 1.00 51.61 C
ATOM 16 N7 A A2566 68.018 176.951 120.166 1.00 52.80 N
ATOM 17 C5 A A2566 67.009 177.587 120.877 1.00 52.59 C
ATOM 18 C6 A A2566 66.969 178.155 122.166 1.00 52.95 C
ATOM 19 N6 A A2566 68.015 178.189 123.000 1.00 52.25 N
ATOM 20 N1 A A2566 65.800 178.698 122.573 1.00 53.09 N
ATOM 21 C2 A A2566 64.755 178.670 121.737 1.00 52.16 C
ATOM 22 N3 A A2566 64.674 178.177 120.507 1.00 51.64 N
ATOM 23 C4 A A2566 65.849 177.645 120.130 1.00 52.00 C
ATOM 24 P C A2567 67.692 179.558 114.385 1.00 46.86 P
ATOM 25 OP1 C A2567 67.233 180.511 113.340 1.00 45.99 O
ATOM 26 OP2 C A2567 68.821 178.642 114.100 1.00 46.66 O
ATOM 27 O5' C A2567 68.064 180.352 115.707 1.00 46.87 O
TER
ATOM 1 O3' G B2564 68.910 171.657 117.422 1.00 45.69 O
ATOM 2 P U B2565 69.674 173.056 117.212 1.00 46.11 P
ATOM 3 OP1 U B2565 71.082 172.878 117.648 1.00 44.30 O
ATOM 4 OP2 U B2565 68.850 174.123 117.819 1.00 46.58 O
ATOM 5 O5' U B2565 69.677 173.277 115.639 1.00 44.63 O
ATOM 6 C5' U B2565 70.596 172.566 114.817 1.00 45.27 C
ATOM 7 C4' U B2565 70.462 172.984 113.379 1.00 47.44 C
ATOM 8 O4' U B2565 71.448 172.241 112.633 1.00 47.97 O
ATOM 9 C3' U B2565 69.105 172.708 112.733 1.00 49.80 C
ATOM 10 O3' U B2565 68.365 173.946 112.696 1.00 50.66 O
ATOM 11 C2' U B2565 69.469 172.294 111.307 1.00 51.26 C
ATOM 12 O2' U B2565 69.634 173.402 110.448 1.00 54.55 O
ATOM 13 C1' U B2565 70.860 171.681 111.487 1.00 51.22 C
ATOM 14 N1 U B2565 71.014 170.218 111.548 1.00 53.59 N
ATOM 15 C2 U B2565 71.733 169.615 110.513 1.00 55.45 C
ATOM 16 O2 U B2565 72.183 170.234 109.568 1.00 58.32 O
ATOM 17 N3 U B2565 71.909 168.264 110.627 1.00 54.20 N
ATOM 18 C4 U B2565 71.459 167.461 111.634 1.00 56.22 C
ATOM 19 O4 U B2565 71.732 166.262 111.598 1.00 57.89 O
ATOM 20 C5 U B2565 70.704 168.140 112.667 1.00 55.22 C
ATOM 21 C6 U B2565 70.508 169.463 112.584 1.00 52.70 C
ATOM 22 P A B2566 66.797 173.991 113.078 1.00 50.67 P
ATOM 23 OP1 A B2566 66.195 172.649 112.889 1.00 52.07 O
ATOM 24 OP2 A B2566 66.223 175.160 112.363 1.00 46.82 O
ATOM 25 O5' A B2566 66.775 174.327 114.637 1.00 50.38 O
TER
Atoms:
OP1: (66.195,172.649,112.889)
OP2: (66.223,175.160,112.363)
C3': (66.468,177.873,115.960)
C1': (65.263,176.974,117.766)
C5': (67.270,175.589,115.124)
O4': (65.700,175.903,116.942)
C8: (67.458,176.656,119.021)
O2': (64.145,178.512,116.270)
C6: (66.969,178.155,122.166)
C5: (67.009,177.587,120.877)
C4: (65.849,177.645,120.130)
P: (66.797,173.991,113.078)
C4': (66.130,176.424,115.656)
C2': (65.365,178.251,116.930)
C2: (64.755,178.670,121.737)
N1: (65.800,178.698,122.573)
N3: (64.674,178.177,120.507)
N6: (68.015,178.189,123.000)
N7: (68.018,176.951,120.166)
N9: (66.153,177.068,118.921)
O5': (66.775,174.327,114.637)
O3': (66.417,178.679,114.796)
OP2: (66.223,175.160,112.363)
C3': (66.468,177.873,115.960)
C1': (65.263,176.974,117.766)
C5': (67.270,175.589,115.124)
O4': (65.700,175.903,116.942)
C8: (67.458,176.656,119.021)
O2': (64.145,178.512,116.270)
C6: (66.969,178.155,122.166)
C5: (67.009,177.587,120.877)
C4: (65.849,177.645,120.130)
P: (66.797,173.991,113.078)
C4': (66.130,176.424,115.656)
C2': (65.365,178.251,116.930)
C2: (64.755,178.670,121.737)
N1: (65.800,178.698,122.573)
N3: (64.674,178.177,120.507)
N6: (68.015,178.189,123.000)
N7: (68.018,176.951,120.166)
N9: (66.153,177.068,118.921)
O5': (66.775,174.327,114.637)
O3': (66.417,178.679,114.796)
C4: (71.459,167.461,111.634)
N3: (71.909,168.264,110.627)
OP1: (71.082,172.878,117.648)
OP2: (68.850,174.123,117.819)
C2: (71.733,169.615,110.513)
C1': (70.860,171.681,111.487)
C3': (69.105,172.708,112.733)
O5': (69.677,173.277,115.639)
O4': (71.448,172.241,112.633)
C5': (70.596,172.566,114.817)
P: (69.674,173.056,117.212)
C4': (70.462,172.984,113.379)
C2': (69.469,172.294,111.307)
O2': (69.634,173.402,110.448)
N1: (71.014,170.218,111.548)
O4: (71.732,166.262,111.598)
O2: (72.183,170.234,109.568)
C6: (70.508,169.463,112.584)
C5: (70.704,168.140,112.667)
O3': (68.365,173.946,112.696)
N3: (71.909,168.264,110.627)
OP1: (71.082,172.878,117.648)
OP2: (68.850,174.123,117.819)
C2: (71.733,169.615,110.513)
C1': (70.860,171.681,111.487)
C3': (69.105,172.708,112.733)
O5': (69.677,173.277,115.639)
O4': (71.448,172.241,112.633)
C5': (70.596,172.566,114.817)
P: (69.674,173.056,117.212)
C4': (70.462,172.984,113.379)
C2': (69.469,172.294,111.307)
O2': (69.634,173.402,110.448)
N1: (71.014,170.218,111.548)
O4: (71.732,166.262,111.598)
O2: (72.183,170.234,109.568)
C6: (70.508,169.463,112.584)
C5: (70.704,168.140,112.667)
O3': (68.365,173.946,112.696)
Image (generated by PyMOL):