ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2435:2433

Extra

PDB:
ATOM 1 O3' C A 434 -52.908 33.825 46.488 1.00 70.36 O
ATOM 2 P A A 435 -52.298 35.251 46.063 1.00 70.21 P
ATOM 3 OP1 A A 435 -52.507 35.404 44.591 1.00 71.04 O
ATOM 4 OP2 A A 435 -50.913 35.301 46.591 1.00 69.38 O
ATOM 5 O5' A A 435 -53.216 36.281 46.858 1.00 70.25 O
ATOM 6 C5' A A 435 -54.559 36.489 46.457 1.00 71.05 C
ATOM 7 C4' A A 435 -55.316 37.366 47.419 1.00 70.98 C
ATOM 8 O4' A A 435 -55.281 36.791 48.746 1.00 70.30 O
ATOM 9 C3' A A 435 -54.783 38.774 47.579 1.00 70.77 C
ATOM 10 O3' A A 435 -55.283 39.643 46.583 1.00 71.56 O
ATOM 11 C2' A A 435 -55.199 39.154 48.997 1.00 70.32 C
ATOM 12 O2' A A 435 -56.542 39.626 49.028 1.00 70.97 O
ATOM 13 C1' A A 435 -55.143 37.802 49.711 1.00 69.86 C
ATOM 14 N9 A A 435 -53.869 37.578 50.408 1.00 68.98 N
ATOM 15 C8 A A 435 -52.715 37.044 49.868 1.00 68.69 C
ATOM 16 N7 A A 435 -51.733 36.906 50.732 1.00 67.90 N
ATOM 17 C5 A A 435 -52.294 37.364 51.922 1.00 67.66 C
ATOM 18 C6 A A 435 -51.769 37.471 53.218 1.00 66.93 C
ATOM 19 N6 A A 435 -50.531 37.122 53.543 1.00 66.29 N
ATOM 20 N1 A A 435 -52.583 37.948 54.177 1.00 66.91 N
ATOM 21 C2 A A 435 -53.845 38.301 53.839 1.00 67.60 C
ATOM 22 N3 A A 435 -54.461 38.258 52.662 1.00 68.33 N
ATOM 23 C4 A A 435 -53.614 37.771 51.740 1.00 68.31 C
ATOM 24 P A A 436 -54.404 39.959 45.278 1.00 69.90 P
ATOM 25 OP1 A A 436 -54.691 38.899 44.276 1.00 70.45 O
ATOM 26 OP2 A A 436 -53.013 40.139 45.741 1.00 69.07 O
ATOM 27 O5' A A 436 -54.979 41.371 44.777 1.00 70.57 O
TER

ATOM 1 O3' C B 432 -43.316 36.385 50.231 1.00 63.26 O
ATOM 2 P G B 433 -43.123 34.904 49.636 1.00 60.35 P
ATOM 3 OP1 G B 433 -42.729 34.047 50.779 1.00 59.74 O
ATOM 4 OP2 G B 433 -42.232 34.992 48.455 1.00 60.61 O
ATOM 5 O5' G B 433 -44.582 34.520 49.135 1.00 61.00 O
ATOM 6 C5' G B 433 -45.504 33.865 49.977 1.00 60.92 C
ATOM 7 C4' G B 433 -46.753 34.674 50.140 1.00 61.28 C
ATOM 8 O4' G B 433 -46.608 36.000 49.571 1.00 61.52 O
ATOM 9 C3' G B 433 -47.990 34.163 49.457 1.00 61.99 C
ATOM 10 O3' G B 433 -48.502 33.003 50.065 1.00 61.89 O
ATOM 11 C2' G B 433 -48.905 35.376 49.584 1.00 62.30 C
ATOM 12 O2' G B 433 -49.417 35.485 50.912 1.00 61.93 O
ATOM 13 C1' G B 433 -47.903 36.522 49.346 1.00 62.09 C
ATOM 14 N9 G B 433 -48.002 37.011 47.978 1.00 62.77 N
ATOM 15 C8 G B 433 -47.271 36.647 46.895 1.00 63.00 C
ATOM 16 N7 G B 433 -47.695 37.242 45.810 1.00 63.71 N
ATOM 17 C5 G B 433 -48.779 38.001 46.205 1.00 63.96 C
ATOM 18 C6 G B 433 -49.636 38.823 45.463 1.00 64.72 C
ATOM 19 O6 G B 433 -49.608 39.080 44.264 1.00 65.33 O
ATOM 20 N1 G B 433 -50.598 39.407 46.255 1.00 64.75 N
ATOM 21 C2 G B 433 -50.753 39.236 47.586 1.00 64.16 C
ATOM 22 N2 G B 433 -51.772 39.928 48.113 1.00 64.39 N
ATOM 23 N3 G B 433 -49.969 38.456 48.308 1.00 63.45 N
ATOM 24 C4 G B 433 -49.004 37.868 47.549 1.00 63.39 C
ATOM 25 P C B 434 -48.997 31.774 49.168 1.00 67.55 P
ATOM 26 OP1 C B 434 -48.786 30.535 49.979 1.00 67.13 O
ATOM 27 OP2 C B 434 -48.328 31.886 47.843 1.00 67.90 O
ATOM 28 O5' C B 434 -50.545 32.065 49.017 1.00 68.20 O
TER

Atoms:
OP1: (-52.507,35.404,44.591)
OP2: (-50.913,35.301,46.591)
C3': (-54.783,38.774,47.579)
C1': (-55.143,37.802,49.711)
C5': (-54.559,36.489,46.457)
O4': (-55.281,36.791,48.746)
C8: (-52.715,37.044,49.868)
O2': (-56.542,39.626,49.028)
C6: (-51.769,37.471,53.218)
C5: (-52.294,37.364,51.922)
C4: (-53.614,37.771,51.740)
P: (-52.298,35.251,46.063)
C4': (-55.316,37.366,47.419)
C2': (-55.199,39.154,48.997)
C2: (-53.845,38.301,53.839)
N1: (-52.583,37.948,54.177)
N3: (-54.461,38.258,52.662)
N6: (-50.531,37.122,53.543)
N7: (-51.733,36.906,50.732)
N9: (-53.869,37.578,50.408)
O5': (-53.216,36.281,46.858)
O3': (-55.283,39.643,46.583)
OP1: (-42.729,34.047,50.779)
OP2: (-42.232,34.992,48.455)
C3': (-47.990,34.163,49.457)
C1': (-47.903,36.522,49.346)
C5': (-45.504,33.865,49.977)
O6: (-49.608,39.080,44.264)
O4': (-46.608,36.000,49.571)
C8: (-47.271,36.647,46.895)
C2: (-50.753,39.236,47.586)
C6: (-49.636,38.823,45.463)
C5: (-48.779,38.001,46.205)
C4: (-49.004,37.868,47.549)
P: (-43.123,34.904,49.636)
C4': (-46.753,34.674,50.140)
C2': (-48.905,35.376,49.584)
O2': (-49.417,35.485,50.912)
N1: (-50.598,39.407,46.255)
N2: (-51.772,39.928,48.113)
N3: (-49.969,38.456,48.308)
N7: (-47.695,37.242,45.810)
N9: (-48.002,37.011,47.978)
O5': (-44.582,34.520,49.135)
O3': (-48.502,33.003,50.065)
Image (generated by PyMOL):
PyMOL image
show in jmol