Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:A9:A32
Extra
PDB:
ATOM 1 O3' U A 8 1.987 -4.172 37.467 1.00 18.18 O
ATOM 2 P A A 9 1.360 -2.852 38.126 1.00 19.14 P
ATOM 3 OP1 A A 9 1.930 -2.713 39.491 1.00 18.06 O
ATOM 4 OP2 A A 9 -0.110 -2.988 37.972 1.00 18.40 O
ATOM 5 O5' A A 9 1.921 -1.723 37.148 1.00 17.58 O
ATOM 6 C5' A A 9 1.416 -0.395 37.226 1.00 17.34 C
ATOM 7 C4' A A 9 2.274 0.568 36.443 1.00 17.26 C
ATOM 8 O4' A A 9 3.662 0.424 36.840 1.00 17.13 O
ATOM 9 C3' A A 9 2.299 0.433 34.927 1.00 16.86 C
ATOM 10 O3' A A 9 1.183 1.058 34.323 1.00 16.71 O
ATOM 11 C2' A A 9 3.608 1.131 34.571 1.00 17.11 C
ATOM 12 O2' A A 9 3.425 2.540 34.593 1.00 17.94 O
ATOM 13 C1' A A 9 4.500 0.749 35.751 1.00 17.31 C
ATOM 14 N9 A A 9 5.468 -0.337 35.461 1.00 17.57 N
ATOM 15 C8 A A 9 6.654 -0.547 36.120 1.00 17.71 C
ATOM 16 N7 A A 9 7.346 -1.562 35.669 1.00 17.84 N
ATOM 17 C5 A A 9 6.566 -2.053 34.634 1.00 17.80 C
ATOM 18 C6 A A 9 6.756 -3.130 33.756 1.00 17.77 C
ATOM 19 N6 A A 9 7.828 -3.922 33.793 1.00 17.78 N
ATOM 20 N1 A A 9 5.800 -3.366 32.833 1.00 17.85 N
ATOM 21 C2 A A 9 4.730 -2.563 32.806 1.00 17.83 C
ATOM 22 N3 A A 9 4.440 -1.519 33.578 1.00 17.88 N
ATOM 23 C4 A A 9 5.408 -1.310 34.488 1.00 17.76 C
ATOM 24 P A A 10 0.026 0.247 33.560 1.00 17.79 P
ATOM 25 OP1 A A 10 -1.150 1.149 33.586 1.00 17.62 O
ATOM 26 OP2 A A 10 -0.061 -1.080 34.219 1.00 18.37 O
ATOM 27 O5' A A 10 0.547 0.085 32.065 1.00 17.33 O
TER
ATOM 1 O3' G B 31 16.646 -7.107 33.264 1.00 18.97 O
ATOM 2 P G B 32 15.802 -8.214 34.057 1.00 19.59 P
ATOM 3 OP1 G B 32 16.565 -8.479 35.305 1.00 19.14 O
ATOM 4 OP2 G B 32 15.555 -9.319 33.098 1.00 19.31 O
ATOM 5 O5' G B 32 14.432 -7.462 34.370 1.00 19.73 O
ATOM 6 C5' G B 32 14.392 -6.280 35.169 1.00 19.18 C
ATOM 7 C4' G B 32 12.995 -5.717 35.204 1.00 19.16 C
ATOM 8 O4' G B 32 12.553 -5.381 33.866 1.00 19.15 O
ATOM 9 C3' G B 32 11.922 -6.646 35.737 1.00 18.91 C
ATOM 10 O3' G B 32 11.903 -6.625 37.149 1.00 19.22 O
ATOM 11 C2' G B 32 10.648 -6.086 35.108 1.00 18.80 C
ATOM 12 O2' G B 32 10.200 -4.955 35.845 1.00 19.19 O
ATOM 13 C1' G B 32 11.161 -5.604 33.749 1.00 18.78 C
ATOM 14 N9 G B 32 10.896 -6.516 32.612 1.00 18.76 N
ATOM 15 C8 G B 32 11.726 -7.490 32.113 1.00 19.11 C
ATOM 16 N7 G B 32 11.223 -8.118 31.082 1.00 19.16 N
ATOM 17 C5 G B 32 9.990 -7.515 30.877 1.00 18.82 C
ATOM 18 C6 G B 32 8.989 -7.770 29.901 1.00 18.39 C
ATOM 19 O6 G B 32 8.983 -8.605 28.988 1.00 18.31 O
ATOM 20 N1 G B 32 7.898 -6.925 30.057 1.00 18.16 N
ATOM 21 C2 G B 32 7.779 -5.961 31.023 1.00 18.07 C
ATOM 22 N2 G B 32 6.643 -5.252 31.003 1.00 17.96 N
ATOM 23 N3 G B 32 8.702 -5.714 31.937 1.00 17.94 N
ATOM 24 C4 G B 32 9.777 -6.519 31.807 1.00 18.49 C
ATOM 25 P U B 33 12.244 -7.957 37.972 1.00 19.62 P
ATOM 26 OP1 U B 33 11.989 -7.651 39.408 1.00 17.74 O
ATOM 27 OP2 U B 33 13.628 -8.348 37.567 1.00 20.28 O
ATOM 28 O5' U B 33 11.121 -8.936 37.380 1.00 18.87 O
TER
ATOM 2 P A A 9 1.360 -2.852 38.126 1.00 19.14 P
ATOM 3 OP1 A A 9 1.930 -2.713 39.491 1.00 18.06 O
ATOM 4 OP2 A A 9 -0.110 -2.988 37.972 1.00 18.40 O
ATOM 5 O5' A A 9 1.921 -1.723 37.148 1.00 17.58 O
ATOM 6 C5' A A 9 1.416 -0.395 37.226 1.00 17.34 C
ATOM 7 C4' A A 9 2.274 0.568 36.443 1.00 17.26 C
ATOM 8 O4' A A 9 3.662 0.424 36.840 1.00 17.13 O
ATOM 9 C3' A A 9 2.299 0.433 34.927 1.00 16.86 C
ATOM 10 O3' A A 9 1.183 1.058 34.323 1.00 16.71 O
ATOM 11 C2' A A 9 3.608 1.131 34.571 1.00 17.11 C
ATOM 12 O2' A A 9 3.425 2.540 34.593 1.00 17.94 O
ATOM 13 C1' A A 9 4.500 0.749 35.751 1.00 17.31 C
ATOM 14 N9 A A 9 5.468 -0.337 35.461 1.00 17.57 N
ATOM 15 C8 A A 9 6.654 -0.547 36.120 1.00 17.71 C
ATOM 16 N7 A A 9 7.346 -1.562 35.669 1.00 17.84 N
ATOM 17 C5 A A 9 6.566 -2.053 34.634 1.00 17.80 C
ATOM 18 C6 A A 9 6.756 -3.130 33.756 1.00 17.77 C
ATOM 19 N6 A A 9 7.828 -3.922 33.793 1.00 17.78 N
ATOM 20 N1 A A 9 5.800 -3.366 32.833 1.00 17.85 N
ATOM 21 C2 A A 9 4.730 -2.563 32.806 1.00 17.83 C
ATOM 22 N3 A A 9 4.440 -1.519 33.578 1.00 17.88 N
ATOM 23 C4 A A 9 5.408 -1.310 34.488 1.00 17.76 C
ATOM 24 P A A 10 0.026 0.247 33.560 1.00 17.79 P
ATOM 25 OP1 A A 10 -1.150 1.149 33.586 1.00 17.62 O
ATOM 26 OP2 A A 10 -0.061 -1.080 34.219 1.00 18.37 O
ATOM 27 O5' A A 10 0.547 0.085 32.065 1.00 17.33 O
TER
ATOM 1 O3' G B 31 16.646 -7.107 33.264 1.00 18.97 O
ATOM 2 P G B 32 15.802 -8.214 34.057 1.00 19.59 P
ATOM 3 OP1 G B 32 16.565 -8.479 35.305 1.00 19.14 O
ATOM 4 OP2 G B 32 15.555 -9.319 33.098 1.00 19.31 O
ATOM 5 O5' G B 32 14.432 -7.462 34.370 1.00 19.73 O
ATOM 6 C5' G B 32 14.392 -6.280 35.169 1.00 19.18 C
ATOM 7 C4' G B 32 12.995 -5.717 35.204 1.00 19.16 C
ATOM 8 O4' G B 32 12.553 -5.381 33.866 1.00 19.15 O
ATOM 9 C3' G B 32 11.922 -6.646 35.737 1.00 18.91 C
ATOM 10 O3' G B 32 11.903 -6.625 37.149 1.00 19.22 O
ATOM 11 C2' G B 32 10.648 -6.086 35.108 1.00 18.80 C
ATOM 12 O2' G B 32 10.200 -4.955 35.845 1.00 19.19 O
ATOM 13 C1' G B 32 11.161 -5.604 33.749 1.00 18.78 C
ATOM 14 N9 G B 32 10.896 -6.516 32.612 1.00 18.76 N
ATOM 15 C8 G B 32 11.726 -7.490 32.113 1.00 19.11 C
ATOM 16 N7 G B 32 11.223 -8.118 31.082 1.00 19.16 N
ATOM 17 C5 G B 32 9.990 -7.515 30.877 1.00 18.82 C
ATOM 18 C6 G B 32 8.989 -7.770 29.901 1.00 18.39 C
ATOM 19 O6 G B 32 8.983 -8.605 28.988 1.00 18.31 O
ATOM 20 N1 G B 32 7.898 -6.925 30.057 1.00 18.16 N
ATOM 21 C2 G B 32 7.779 -5.961 31.023 1.00 18.07 C
ATOM 22 N2 G B 32 6.643 -5.252 31.003 1.00 17.96 N
ATOM 23 N3 G B 32 8.702 -5.714 31.937 1.00 17.94 N
ATOM 24 C4 G B 32 9.777 -6.519 31.807 1.00 18.49 C
ATOM 25 P U B 33 12.244 -7.957 37.972 1.00 19.62 P
ATOM 26 OP1 U B 33 11.989 -7.651 39.408 1.00 17.74 O
ATOM 27 OP2 U B 33 13.628 -8.348 37.567 1.00 20.28 O
ATOM 28 O5' U B 33 11.121 -8.936 37.380 1.00 18.87 O
TER
Atoms:
OP1: (1.930,-2.713,39.491)
OP2: (-0.110,-2.988,37.972)
C3': (2.299,0.433,34.927)
C1': (4.500,0.749,35.751)
C5': (1.416,-0.395,37.226)
O4': (3.662,0.424,36.840)
C8: (6.654,-0.547,36.120)
O2': (3.425,2.540,34.593)
C6: (6.756,-3.130,33.756)
C5: (6.566,-2.053,34.634)
C4: (5.408,-1.310,34.488)
P: (1.360,-2.852,38.126)
C4': (2.274,0.568,36.443)
C2': (3.608,1.131,34.571)
C2: (4.730,-2.563,32.806)
N1: (5.800,-3.366,32.833)
N3: (4.440,-1.519,33.578)
N6: (7.828,-3.922,33.793)
N7: (7.346,-1.562,35.669)
N9: (5.468,-0.337,35.461)
O5': (1.921,-1.723,37.148)
O3': (1.183,1.058,34.323)
OP2: (-0.110,-2.988,37.972)
C3': (2.299,0.433,34.927)
C1': (4.500,0.749,35.751)
C5': (1.416,-0.395,37.226)
O4': (3.662,0.424,36.840)
C8: (6.654,-0.547,36.120)
O2': (3.425,2.540,34.593)
C6: (6.756,-3.130,33.756)
C5: (6.566,-2.053,34.634)
C4: (5.408,-1.310,34.488)
P: (1.360,-2.852,38.126)
C4': (2.274,0.568,36.443)
C2': (3.608,1.131,34.571)
C2: (4.730,-2.563,32.806)
N1: (5.800,-3.366,32.833)
N3: (4.440,-1.519,33.578)
N6: (7.828,-3.922,33.793)
N7: (7.346,-1.562,35.669)
N9: (5.468,-0.337,35.461)
O5': (1.921,-1.723,37.148)
O3': (1.183,1.058,34.323)
OP1: (16.565,-8.479,35.305)
OP2: (15.555,-9.319,33.098)
C3': (11.922,-6.646,35.737)
C1': (11.161,-5.604,33.749)
C5': (14.392,-6.280,35.169)
O6: (8.983,-8.605,28.988)
O4': (12.553,-5.381,33.866)
C8: (11.726,-7.490,32.113)
C2: (7.779,-5.961,31.023)
C6: (8.989,-7.770,29.901)
C5: (9.990,-7.515,30.877)
C4: (9.777,-6.519,31.807)
P: (15.802,-8.214,34.057)
C4': (12.995,-5.717,35.204)
C2': (10.648,-6.086,35.108)
O2': (10.200,-4.955,35.845)
N1: (7.898,-6.925,30.057)
N2: (6.643,-5.252,31.003)
N3: (8.702,-5.714,31.937)
N7: (11.223,-8.118,31.082)
N9: (10.896,-6.516,32.612)
O5': (14.432,-7.462,34.370)
O3': (11.903,-6.625,37.149)
OP2: (15.555,-9.319,33.098)
C3': (11.922,-6.646,35.737)
C1': (11.161,-5.604,33.749)
C5': (14.392,-6.280,35.169)
O6: (8.983,-8.605,28.988)
O4': (12.553,-5.381,33.866)
C8: (11.726,-7.490,32.113)
C2: (7.779,-5.961,31.023)
C6: (8.989,-7.770,29.901)
C5: (9.990,-7.515,30.877)
C4: (9.777,-6.519,31.807)
P: (15.802,-8.214,34.057)
C4': (12.995,-5.717,35.204)
C2': (10.648,-6.086,35.108)
O2': (10.200,-4.955,35.845)
N1: (7.898,-6.925,30.057)
N2: (6.643,-5.252,31.003)
N3: (8.702,-5.714,31.937)
N7: (11.223,-8.118,31.082)
N9: (10.896,-6.516,32.612)
O5': (14.432,-7.462,34.370)
O3': (11.903,-6.625,37.149)
Image (generated by PyMOL):