ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A208:A425

Extra

PDB:
ATOM 1 O3' G A 207 -90.025 -52.482 86.243 1.00 9.19 O
ATOM 2 P A A 208 -91.452 -53.011 85.753 1.00 36.96 P
ATOM 3 OP1 A A 208 -91.237 -54.365 85.228 1.00 20.98 O
ATOM 4 OP2 A A 208 -92.078 -51.984 84.897 1.00 20.98 O
ATOM 5 O5' A A 208 -92.317 -53.108 87.084 1.00 37.80 O
ATOM 6 C5' A A 208 -92.089 -54.150 88.047 1.00 37.80 C
ATOM 7 C4' A A 208 -92.530 -53.696 89.420 1.00 37.80 C
ATOM 8 O4' A A 208 -91.734 -52.546 89.796 1.00 37.80 O
ATOM 9 C3' A A 208 -93.995 -53.283 89.567 1.00 37.80 C
ATOM 10 O3' A A 208 -94.435 -53.634 90.872 1.00 37.80 O
ATOM 11 C2' A A 208 -93.945 -51.763 89.479 1.00 37.80 C
ATOM 12 O2' A A 208 -94.970 -51.155 90.239 1.00 37.80 O
ATOM 13 C1' A A 208 -92.582 -51.458 90.102 1.00 37.80 C
ATOM 14 N9 A A 208 -91.949 -50.246 89.589 1.00 39.11 N
ATOM 15 C8 A A 208 -91.563 -49.988 88.303 1.00 39.11 C
ATOM 16 N7 A A 208 -90.986 -48.825 88.151 1.00 39.10 N
ATOM 17 C5 A A 208 -91.002 -48.277 89.421 1.00 39.09 C
ATOM 18 C6 A A 208 -90.533 -47.063 89.921 1.00 39.12 C
ATOM 19 N6 A A 208 -89.917 -46.148 89.176 1.00 39.16 N
ATOM 20 N1 A A 208 -90.710 -46.817 91.233 1.00 39.12 N
ATOM 21 C2 A A 208 -91.308 -47.747 91.981 1.00 39.14 C
ATOM 22 N3 A A 208 -91.782 -48.932 91.626 1.00 39.14 N
ATOM 23 C4 A A 208 -91.598 -49.137 90.315 1.00 39.09 C
ATOM 24 P A A 209 -95.488 -54.828 91.071 1.00106.88 P
ATOM 25 OP1 A A 209 -94.894 -56.076 90.541 1.00 37.25 O
ATOM 26 OP2 A A 209 -96.798 -54.367 90.562 1.00 37.24 O
ATOM 27 O5' A A 209 -95.590 -54.997 92.653 1.00143.52 O
TER

ATOM 1 O3' C B 424 -84.633 -40.514 83.828 1.00 45.66 O
ATOM 2 P G B 425 -86.226 -40.483 83.629 1.00 25.07 P
ATOM 3 OP1 G B 425 -86.504 -40.972 82.260 1.00 49.01 O
ATOM 4 OP2 G B 425 -86.744 -39.162 84.058 1.00 48.86 O
ATOM 5 O5' G B 425 -86.768 -41.596 84.620 1.00 11.67 O
ATOM 6 C5' G B 425 -86.467 -42.971 84.365 1.00 11.67 C
ATOM 7 C4' G B 425 -87.365 -43.861 85.166 1.00 11.67 C
ATOM 8 O4' G B 425 -87.002 -43.780 86.562 1.00 11.67 O
ATOM 9 C3' G B 425 -88.833 -43.492 85.114 1.00 11.67 C
ATOM 10 O3' G B 425 -89.460 -44.032 83.961 1.00 11.67 O
ATOM 11 C2' G B 425 -89.358 -44.083 86.416 1.00 11.67 C
ATOM 12 O2' G B 425 -89.624 -45.472 86.331 1.00 11.67 O
ATOM 13 C1' G B 425 -88.172 -43.855 87.356 1.00 11.67 C
ATOM 14 N9 G B 425 -88.304 -42.602 88.096 1.00 39.37 N
ATOM 15 C8 G B 425 -87.856 -41.360 87.712 1.00 39.48 C
ATOM 16 N7 G B 425 -88.152 -40.425 88.569 1.00 39.61 N
ATOM 17 C5 G B 425 -88.830 -41.088 89.581 1.00 39.57 C
ATOM 18 C6 G B 425 -89.397 -40.595 90.767 1.00 39.34 C
ATOM 19 O6 G B 425 -89.434 -39.439 91.170 1.00 39.30 O
ATOM 20 N1 G B 425 -89.977 -41.606 91.518 1.00 39.30 N
ATOM 21 C2 G B 425 -90.015 -42.929 91.162 1.00 39.38 C
ATOM 22 N2 G B 425 -90.627 -43.759 92.023 1.00 39.34 N
ATOM 23 N3 G B 425 -89.496 -43.403 90.047 1.00 39.57 N
ATOM 24 C4 G B 425 -88.922 -42.433 89.309 1.00 39.63 C
ATOM 25 P G B 426 -90.992 -43.658 83.631 1.00 52.28 P
ATOM 26 OP1 G B 426 -91.530 -42.756 84.699 1.00 52.08 O
ATOM 27 OP2 G B 426 -91.697 -44.932 83.323 1.00 52.19 O
ATOM 28 O5' G B 426 -90.886 -42.828 82.279 1.00 15.08 O
TER

Atoms:
OP1: (-91.237,-54.365,85.228)
OP2: (-92.078,-51.984,84.897)
C3': (-93.995,-53.283,89.567)
C1': (-92.582,-51.458,90.102)
C5': (-92.089,-54.150,88.047)
O4': (-91.734,-52.546,89.796)
C8: (-91.563,-49.988,88.303)
O2': (-94.970,-51.155,90.239)
C6: (-90.533,-47.063,89.921)
C5: (-91.002,-48.277,89.421)
C4: (-91.598,-49.137,90.315)
P: (-91.452,-53.011,85.753)
C4': (-92.530,-53.696,89.420)
C2': (-93.945,-51.763,89.479)
C2: (-91.308,-47.747,91.981)
N1: (-90.710,-46.817,91.233)
N3: (-91.782,-48.932,91.626)
N6: (-89.917,-46.148,89.176)
N7: (-90.986,-48.825,88.151)
N9: (-91.949,-50.246,89.589)
O5': (-92.317,-53.108,87.084)
O3': (-94.435,-53.634,90.872)
OP1: (-86.504,-40.972,82.260)
OP2: (-86.744,-39.162,84.058)
C3': (-88.833,-43.492,85.114)
C1': (-88.172,-43.855,87.356)
C5': (-86.467,-42.971,84.365)
O6: (-89.434,-39.439,91.170)
O4': (-87.002,-43.780,86.562)
C8: (-87.856,-41.360,87.712)
C2: (-90.015,-42.929,91.162)
C6: (-89.397,-40.595,90.767)
C5: (-88.830,-41.088,89.581)
C4: (-88.922,-42.433,89.309)
P: (-86.226,-40.483,83.629)
C4': (-87.365,-43.861,85.166)
C2': (-89.358,-44.083,86.416)
O2': (-89.624,-45.472,86.331)
N1: (-89.977,-41.606,91.518)
N2: (-90.627,-43.759,92.023)
N3: (-89.496,-43.403,90.047)
N7: (-88.152,-40.425,88.569)
N9: (-88.304,-42.602,88.096)
O5': (-86.768,-41.596,84.620)
O3': (-89.460,-44.032,83.961)
Image (generated by PyMOL):
PyMOL image
show in jmol