ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MZP:B40:B38

Extra

PDB:
ATOM 1 O3' A A 39 18.575 70.257 9.695 1.00 34.96 O
ATOM 2 P A A 40 17.302 69.506 9.083 1.00 34.46 P
ATOM 3 OP1 A A 40 17.434 69.501 7.610 1.00 32.15 O
ATOM 4 OP2 A A 40 16.104 70.124 9.719 1.00 33.37 O
ATOM 5 O5' A A 40 17.430 68.023 9.651 1.00 34.83 O
ATOM 6 C5' A A 40 18.586 67.227 9.403 1.00 35.03 C
ATOM 7 C4' A A 40 18.538 65.970 10.243 1.00 35.22 C
ATOM 8 O4' A A 40 18.689 66.308 11.647 1.00 33.91 O
ATOM 9 C3' A A 40 17.237 65.189 10.142 1.00 34.93 C
ATOM 10 O3' A A 40 17.355 64.238 9.085 1.00 36.55 O
ATOM 11 C2' A A 40 17.159 64.492 11.498 1.00 34.79 C
ATOM 12 O2' A A 40 17.923 63.310 11.515 1.00 34.53 O
ATOM 13 C1' A A 40 17.815 65.518 12.429 1.00 34.47 C
ATOM 14 N9 A A 40 16.906 66.429 13.130 1.00 33.96 N
ATOM 15 C8 A A 40 16.364 67.585 12.634 1.00 31.53 C
ATOM 16 N7 A A 40 15.651 68.251 13.508 1.00 32.43 N
ATOM 17 C5 A A 40 15.714 67.476 14.654 1.00 33.49 C
ATOM 18 C6 A A 40 15.174 67.647 15.946 1.00 35.55 C
ATOM 19 N6 A A 40 14.444 68.708 16.310 1.00 35.56 N
ATOM 20 N1 A A 40 15.416 66.679 16.864 1.00 34.40 N
ATOM 21 C2 A A 40 16.148 65.619 16.495 1.00 31.47 C
ATOM 22 N3 A A 40 16.709 65.351 15.315 1.00 33.86 N
ATOM 23 C4 A A 40 16.458 66.332 14.429 1.00 33.15 C
ATOM 24 P A A 41 16.081 63.868 8.181 1.00 36.33 P
ATOM 25 OP1 A A 41 16.512 62.860 7.185 1.00 39.71 O
ATOM 26 OP2 A A 41 15.538 65.163 7.713 1.00 37.10 O
ATOM 27 O5' A A 41 15.060 63.166 9.193 1.00 37.42 O
TER

ATOM 1 O3' U B 37 9.299 74.426 11.261 1.00 42.68 O
ATOM 2 P G B 38 10.689 75.039 10.744 1.00 43.65 P
ATOM 3 OP1 G B 38 10.906 76.386 11.332 1.00 44.17 O
ATOM 4 OP2 G B 38 10.715 74.867 9.273 1.00 43.11 O
ATOM 5 O5' G B 38 11.770 74.066 11.380 1.00 42.64 O
ATOM 6 C5' G B 38 11.903 73.975 12.783 1.00 42.37 C
ATOM 7 C4' G B 38 12.773 72.804 13.138 1.00 43.14 C
ATOM 8 O4' G B 38 12.104 71.572 12.760 1.00 42.83 O
ATOM 9 C3' G B 38 14.097 72.736 12.402 1.00 42.35 C
ATOM 10 O3' G B 38 15.067 73.577 13.012 1.00 41.93 O
ATOM 11 C2' G B 38 14.445 71.264 12.558 1.00 42.26 C
ATOM 12 O2' G B 38 14.959 70.970 13.837 1.00 42.91 O
ATOM 13 C1' G B 38 13.071 70.613 12.376 1.00 42.39 C
ATOM 14 N9 G B 38 12.860 70.276 10.973 1.00 42.25 N
ATOM 15 C8 G B 38 12.477 71.119 9.959 1.00 40.75 C
ATOM 16 N7 G B 38 12.511 70.551 8.783 1.00 40.05 N
ATOM 17 C5 G B 38 12.914 69.250 9.043 1.00 39.12 C
ATOM 18 C6 G B 38 13.168 68.181 8.160 1.00 38.34 C
ATOM 19 O6 G B 38 13.108 68.179 6.932 1.00 42.14 O
ATOM 20 N1 G B 38 13.544 67.028 8.841 1.00 36.97 N
ATOM 21 C2 G B 38 13.673 66.924 10.204 1.00 38.88 C
ATOM 22 N2 G B 38 14.050 65.732 10.678 1.00 36.18 N
ATOM 23 N3 G B 38 13.452 67.923 11.042 1.00 39.06 N
ATOM 24 C4 G B 38 13.086 69.051 10.394 1.00 40.88 C
ATOM 25 P A B 39 16.260 74.196 12.123 1.00 42.39 P
ATOM 26 OP1 A B 39 16.908 75.274 12.926 1.00 42.49 O
ATOM 27 OP2 A B 39 15.700 74.510 10.780 1.00 40.48 O
ATOM 28 O5' A B 39 17.298 72.996 11.971 1.00 40.20 O
TER

Atoms:
OP1: (17.434,69.501,7.610)
OP2: (16.104,70.124,9.719)
C3': (17.237,65.189,10.142)
C1': (17.815,65.518,12.429)
C5': (18.586,67.227,9.403)
O4': (18.689,66.308,11.647)
C8: (16.364,67.585,12.634)
O2': (17.923,63.310,11.515)
C6: (15.174,67.647,15.946)
C5: (15.714,67.476,14.654)
C4: (16.458,66.332,14.429)
P: (17.302,69.506,9.083)
C4': (18.538,65.970,10.243)
C2': (17.159,64.492,11.498)
C2: (16.148,65.619,16.495)
N1: (15.416,66.679,16.864)
N3: (16.709,65.351,15.315)
N6: (14.444,68.708,16.310)
N7: (15.651,68.251,13.508)
N9: (16.906,66.429,13.130)
O5': (17.430,68.023,9.651)
O3': (17.355,64.238,9.085)
OP1: (10.906,76.386,11.332)
OP2: (10.715,74.867,9.273)
C3': (14.097,72.736,12.402)
C1': (13.071,70.613,12.376)
C5': (11.903,73.975,12.783)
O6: (13.108,68.179,6.932)
O4': (12.104,71.572,12.760)
C8: (12.477,71.119,9.959)
C2: (13.673,66.924,10.204)
C6: (13.168,68.181,8.160)
C5: (12.914,69.250,9.043)
C4: (13.086,69.051,10.394)
P: (10.689,75.039,10.744)
C4': (12.773,72.804,13.138)
C2': (14.445,71.264,12.558)
O2': (14.959,70.970,13.837)
N1: (13.544,67.028,8.841)
N2: (14.050,65.732,10.678)
N3: (13.452,67.923,11.042)
N7: (12.511,70.551,8.783)
N9: (12.860,70.276,10.973)
O5': (11.770,74.066,11.380)
O3': (15.067,73.577,13.012)
Image (generated by PyMOL):
PyMOL image
show in jmol