Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X90:X85
Extra
PDB:
ATOM 1 O3' U A 89 34.715 19.337 6.099 1.00 23.76 O
ATOM 2 P A A 90 34.097 17.968 6.646 1.00 23.85 P
ATOM 3 OP1 A A 90 33.839 17.179 5.418 1.00 22.71 O
ATOM 4 OP2 A A 90 32.975 18.242 7.588 1.00 21.62 O
ATOM 5 O5' A A 90 35.325 17.343 7.436 1.00 21.72 O
ATOM 6 C5' A A 90 36.492 16.959 6.717 1.00 21.52 C
ATOM 7 C4' A A 90 37.409 16.097 7.545 1.00 24.73 C
ATOM 8 O4' A A 90 38.160 16.873 8.511 1.00 23.27 O
ATOM 9 C3' A A 90 36.756 15.032 8.401 1.00 23.55 C
ATOM 10 O3' A A 90 36.307 13.937 7.635 1.00 24.94 O
ATOM 11 C2' A A 90 37.883 14.670 9.356 1.00 23.66 C
ATOM 12 O2' A A 90 38.862 13.890 8.680 1.00 22.20 O
ATOM 13 C1' A A 90 38.499 16.040 9.600 1.00 20.53 C
ATOM 14 N9 A A 90 38.132 16.719 10.861 1.00 22.42 N
ATOM 15 C8 A A 90 37.385 17.861 11.023 1.00 20.61 C
ATOM 16 N7 A A 90 37.297 18.254 12.278 1.00 21.97 N
ATOM 17 C5 A A 90 38.041 17.320 12.986 1.00 20.65 C
ATOM 18 C6 A A 90 38.347 17.171 14.349 1.00 19.58 C
ATOM 19 N6 A A 90 37.914 17.994 15.308 1.00 18.42 N
ATOM 20 N1 A A 90 39.124 16.117 14.700 1.00 21.13 N
ATOM 21 C2 A A 90 39.563 15.281 13.752 1.00 21.96 C
ATOM 22 N3 A A 90 39.343 15.326 12.441 1.00 19.80 N
ATOM 23 C4 A A 90 38.572 16.374 12.121 1.00 20.38 C
ATOM 24 P A A 91 35.049 13.114 8.188 1.00 25.65 P
ATOM 25 OP1 A A 91 34.863 12.072 7.158 1.00 24.30 O
ATOM 26 OP2 A A 91 33.951 14.037 8.541 1.00 26.04 O
ATOM 27 O5' A A 91 35.625 12.484 9.532 1.00 22.01 O
TER
ATOM 1 O3' C B 84 30.640 25.326 16.530 1.00 16.22 O
ATOM 2 P G B 85 32.054 25.677 15.860 1.00 18.53 P
ATOM 3 OP1 G B 85 32.724 26.546 16.828 1.00 17.09 O
ATOM 4 OP2 G B 85 31.786 26.212 14.521 1.00 16.62 O
ATOM 5 O5' G B 85 32.821 24.325 15.704 1.00 17.57 O
ATOM 6 C5' G B 85 33.361 23.672 16.837 1.00 17.54 C
ATOM 7 C4' G B 85 34.118 22.457 16.391 1.00 18.15 C
ATOM 8 O4' G B 85 33.170 21.456 15.927 1.00 17.72 O
ATOM 9 C3' G B 85 35.056 22.649 15.210 1.00 18.12 C
ATOM 10 O3' G B 85 36.284 23.272 15.553 1.00 19.32 O
ATOM 11 C2' G B 85 35.186 21.219 14.698 1.00 18.14 C
ATOM 12 O2' G B 85 36.078 20.456 15.503 1.00 17.39 O
ATOM 13 C1' G B 85 33.746 20.704 14.880 1.00 16.96 C
ATOM 14 N9 G B 85 33.038 20.989 13.622 1.00 17.63 N
ATOM 15 C8 G B 85 32.328 22.110 13.299 1.00 15.92 C
ATOM 16 N7 G B 85 31.907 22.074 12.057 1.00 17.96 N
ATOM 17 C5 G B 85 32.395 20.899 11.541 1.00 16.53 C
ATOM 18 C6 G B 85 32.251 20.344 10.242 1.00 20.49 C
ATOM 19 O6 G B 85 31.653 20.816 9.261 1.00 22.82 O
ATOM 20 N1 G B 85 32.910 19.133 10.137 1.00 18.28 N
ATOM 21 C2 G B 85 33.608 18.509 11.144 1.00 17.03 C
ATOM 22 N2 G B 85 34.147 17.323 10.812 1.00 17.02 N
ATOM 23 N3 G B 85 33.743 19.017 12.368 1.00 15.48 N
ATOM 24 C4 G B 85 33.108 20.207 12.488 1.00 15.40 C
ATOM 25 P A B 86 37.220 24.032 14.464 1.00 21.19 P
ATOM 26 OP1 A B 86 37.576 23.041 13.441 1.00 19.63 O
ATOM 27 OP2 A B 86 38.302 24.623 15.316 1.00 20.77 O
ATOM 28 O5' A B 86 36.313 25.137 13.773 1.00 18.71 O
TER
ATOM 2 P A A 90 34.097 17.968 6.646 1.00 23.85 P
ATOM 3 OP1 A A 90 33.839 17.179 5.418 1.00 22.71 O
ATOM 4 OP2 A A 90 32.975 18.242 7.588 1.00 21.62 O
ATOM 5 O5' A A 90 35.325 17.343 7.436 1.00 21.72 O
ATOM 6 C5' A A 90 36.492 16.959 6.717 1.00 21.52 C
ATOM 7 C4' A A 90 37.409 16.097 7.545 1.00 24.73 C
ATOM 8 O4' A A 90 38.160 16.873 8.511 1.00 23.27 O
ATOM 9 C3' A A 90 36.756 15.032 8.401 1.00 23.55 C
ATOM 10 O3' A A 90 36.307 13.937 7.635 1.00 24.94 O
ATOM 11 C2' A A 90 37.883 14.670 9.356 1.00 23.66 C
ATOM 12 O2' A A 90 38.862 13.890 8.680 1.00 22.20 O
ATOM 13 C1' A A 90 38.499 16.040 9.600 1.00 20.53 C
ATOM 14 N9 A A 90 38.132 16.719 10.861 1.00 22.42 N
ATOM 15 C8 A A 90 37.385 17.861 11.023 1.00 20.61 C
ATOM 16 N7 A A 90 37.297 18.254 12.278 1.00 21.97 N
ATOM 17 C5 A A 90 38.041 17.320 12.986 1.00 20.65 C
ATOM 18 C6 A A 90 38.347 17.171 14.349 1.00 19.58 C
ATOM 19 N6 A A 90 37.914 17.994 15.308 1.00 18.42 N
ATOM 20 N1 A A 90 39.124 16.117 14.700 1.00 21.13 N
ATOM 21 C2 A A 90 39.563 15.281 13.752 1.00 21.96 C
ATOM 22 N3 A A 90 39.343 15.326 12.441 1.00 19.80 N
ATOM 23 C4 A A 90 38.572 16.374 12.121 1.00 20.38 C
ATOM 24 P A A 91 35.049 13.114 8.188 1.00 25.65 P
ATOM 25 OP1 A A 91 34.863 12.072 7.158 1.00 24.30 O
ATOM 26 OP2 A A 91 33.951 14.037 8.541 1.00 26.04 O
ATOM 27 O5' A A 91 35.625 12.484 9.532 1.00 22.01 O
TER
ATOM 1 O3' C B 84 30.640 25.326 16.530 1.00 16.22 O
ATOM 2 P G B 85 32.054 25.677 15.860 1.00 18.53 P
ATOM 3 OP1 G B 85 32.724 26.546 16.828 1.00 17.09 O
ATOM 4 OP2 G B 85 31.786 26.212 14.521 1.00 16.62 O
ATOM 5 O5' G B 85 32.821 24.325 15.704 1.00 17.57 O
ATOM 6 C5' G B 85 33.361 23.672 16.837 1.00 17.54 C
ATOM 7 C4' G B 85 34.118 22.457 16.391 1.00 18.15 C
ATOM 8 O4' G B 85 33.170 21.456 15.927 1.00 17.72 O
ATOM 9 C3' G B 85 35.056 22.649 15.210 1.00 18.12 C
ATOM 10 O3' G B 85 36.284 23.272 15.553 1.00 19.32 O
ATOM 11 C2' G B 85 35.186 21.219 14.698 1.00 18.14 C
ATOM 12 O2' G B 85 36.078 20.456 15.503 1.00 17.39 O
ATOM 13 C1' G B 85 33.746 20.704 14.880 1.00 16.96 C
ATOM 14 N9 G B 85 33.038 20.989 13.622 1.00 17.63 N
ATOM 15 C8 G B 85 32.328 22.110 13.299 1.00 15.92 C
ATOM 16 N7 G B 85 31.907 22.074 12.057 1.00 17.96 N
ATOM 17 C5 G B 85 32.395 20.899 11.541 1.00 16.53 C
ATOM 18 C6 G B 85 32.251 20.344 10.242 1.00 20.49 C
ATOM 19 O6 G B 85 31.653 20.816 9.261 1.00 22.82 O
ATOM 20 N1 G B 85 32.910 19.133 10.137 1.00 18.28 N
ATOM 21 C2 G B 85 33.608 18.509 11.144 1.00 17.03 C
ATOM 22 N2 G B 85 34.147 17.323 10.812 1.00 17.02 N
ATOM 23 N3 G B 85 33.743 19.017 12.368 1.00 15.48 N
ATOM 24 C4 G B 85 33.108 20.207 12.488 1.00 15.40 C
ATOM 25 P A B 86 37.220 24.032 14.464 1.00 21.19 P
ATOM 26 OP1 A B 86 37.576 23.041 13.441 1.00 19.63 O
ATOM 27 OP2 A B 86 38.302 24.623 15.316 1.00 20.77 O
ATOM 28 O5' A B 86 36.313 25.137 13.773 1.00 18.71 O
TER
Atoms:
OP1: (33.839,17.179,5.418)
OP2: (32.975,18.242,7.588)
C3': (36.756,15.032,8.401)
C1': (38.499,16.040,9.600)
C5': (36.492,16.959,6.717)
O4': (38.160,16.873,8.511)
C8: (37.385,17.861,11.023)
O2': (38.862,13.890,8.680)
C6: (38.347,17.171,14.349)
C5: (38.041,17.320,12.986)
C4: (38.572,16.374,12.121)
P: (34.097,17.968,6.646)
C4': (37.409,16.097,7.545)
C2': (37.883,14.670,9.356)
C2: (39.563,15.281,13.752)
N1: (39.124,16.117,14.700)
N3: (39.343,15.326,12.441)
N6: (37.914,17.994,15.308)
N7: (37.297,18.254,12.278)
N9: (38.132,16.719,10.861)
O5': (35.325,17.343,7.436)
O3': (36.307,13.937,7.635)
OP2: (32.975,18.242,7.588)
C3': (36.756,15.032,8.401)
C1': (38.499,16.040,9.600)
C5': (36.492,16.959,6.717)
O4': (38.160,16.873,8.511)
C8: (37.385,17.861,11.023)
O2': (38.862,13.890,8.680)
C6: (38.347,17.171,14.349)
C5: (38.041,17.320,12.986)
C4: (38.572,16.374,12.121)
P: (34.097,17.968,6.646)
C4': (37.409,16.097,7.545)
C2': (37.883,14.670,9.356)
C2: (39.563,15.281,13.752)
N1: (39.124,16.117,14.700)
N3: (39.343,15.326,12.441)
N6: (37.914,17.994,15.308)
N7: (37.297,18.254,12.278)
N9: (38.132,16.719,10.861)
O5': (35.325,17.343,7.436)
O3': (36.307,13.937,7.635)
OP1: (32.724,26.546,16.828)
OP2: (31.786,26.212,14.521)
C3': (35.056,22.649,15.210)
C1': (33.746,20.704,14.880)
C5': (33.361,23.672,16.837)
O6: (31.653,20.816,9.261)
O4': (33.170,21.456,15.927)
C8: (32.328,22.110,13.299)
C2: (33.608,18.509,11.144)
C6: (32.251,20.344,10.242)
C5: (32.395,20.899,11.541)
C4: (33.108,20.207,12.488)
P: (32.054,25.677,15.860)
C4': (34.118,22.457,16.391)
C2': (35.186,21.219,14.698)
O2': (36.078,20.456,15.503)
N1: (32.910,19.133,10.137)
N2: (34.147,17.323,10.812)
N3: (33.743,19.017,12.368)
N7: (31.907,22.074,12.057)
N9: (33.038,20.989,13.622)
O5': (32.821,24.325,15.704)
O3': (36.284,23.272,15.553)
OP2: (31.786,26.212,14.521)
C3': (35.056,22.649,15.210)
C1': (33.746,20.704,14.880)
C5': (33.361,23.672,16.837)
O6: (31.653,20.816,9.261)
O4': (33.170,21.456,15.927)
C8: (32.328,22.110,13.299)
C2: (33.608,18.509,11.144)
C6: (32.251,20.344,10.242)
C5: (32.395,20.899,11.541)
C4: (33.108,20.207,12.488)
P: (32.054,25.677,15.860)
C4': (34.118,22.457,16.391)
C2': (35.186,21.219,14.698)
O2': (36.078,20.456,15.503)
N1: (32.910,19.133,10.137)
N2: (34.147,17.323,10.812)
N3: (33.743,19.017,12.368)
N7: (31.907,22.074,12.057)
N9: (33.038,20.989,13.622)
O5': (32.821,24.325,15.704)
O3': (36.284,23.272,15.553)
Image (generated by PyMOL):