ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0648:0732

Extra

PDB:
ATOM 1 O3' A A 647 31.785 79.217 35.990 1.00 42.31 O
ATOM 2 P A A 648 31.309 77.682 36.072 1.00 43.14 P
ATOM 3 OP1 A A 648 31.106 77.237 34.667 1.00 45.00 O
ATOM 4 OP2 A A 648 30.194 77.568 37.041 1.00 42.08 O
ATOM 5 O5' A A 648 32.583 76.917 36.655 1.00 42.58 O
ATOM 6 C5' A A 648 33.486 76.186 35.799 1.00 40.24 C
ATOM 7 C4' A A 648 34.778 76.949 35.635 1.00 42.44 C
ATOM 8 O4' A A 648 35.300 77.321 36.940 1.00 43.02 O
ATOM 9 C3' A A 648 35.908 76.212 34.914 1.00 43.21 C
ATOM 10 O3' A A 648 36.693 77.119 34.145 1.00 44.37 O
ATOM 11 C2' A A 648 36.773 75.730 36.070 1.00 44.09 C
ATOM 12 O2' A A 648 38.124 75.523 35.698 1.00 44.53 O
ATOM 13 C1' A A 648 36.642 76.904 37.036 1.00 45.59 C
ATOM 14 N9 A A 648 36.947 76.588 38.430 1.00 49.28 N
ATOM 15 C8 A A 648 36.537 75.508 39.164 1.00 50.70 C
ATOM 16 N7 A A 648 37.016 75.484 40.382 1.00 52.85 N
ATOM 17 C5 A A 648 37.793 76.630 40.459 1.00 54.40 C
ATOM 18 C6 A A 648 38.584 77.173 41.492 1.00 56.08 C
ATOM 19 N6 A A 648 38.742 76.590 42.686 1.00 57.90 N
ATOM 20 N1 A A 648 39.221 78.342 41.249 1.00 55.23 N
ATOM 21 C2 A A 648 39.078 78.909 40.049 1.00 54.27 C
ATOM 22 N3 A A 648 38.375 78.492 38.998 1.00 54.48 N
ATOM 23 C4 A A 648 37.748 77.330 39.271 1.00 53.10 C
ATOM 24 P G A 649 36.077 77.803 32.828 1.00 46.51 P
ATOM 25 OP1 G A 649 35.403 76.752 32.019 1.00 47.10 O
ATOM 26 OP2 G A 649 37.157 78.619 32.223 1.00 47.04 O
ATOM 27 O5' G A 649 34.959 78.784 33.394 1.00 43.92 O
TER

ATOM 1 O3' G B 731 37.421 67.406 45.598 1.00 55.00 O
ATOM 2 P G B 732 36.200 68.311 46.099 1.00 55.75 P
ATOM 3 OP1 G B 732 36.437 68.571 47.543 1.00 55.58 O
ATOM 4 OP2 G B 732 34.933 67.665 45.674 1.00 56.25 O
ATOM 5 O5' G B 732 36.373 69.659 45.265 1.00 55.32 O
ATOM 6 C5' G B 732 37.619 70.403 45.292 1.00 55.28 C
ATOM 7 C4' G B 732 37.627 71.451 44.205 1.00 53.31 C
ATOM 8 O4' G B 732 37.545 70.786 42.923 1.00 54.62 O
ATOM 9 C3' G B 732 36.441 72.402 44.231 1.00 51.74 C
ATOM 10 O3' G B 732 36.742 73.552 45.003 1.00 48.84 O
ATOM 11 C2' G B 732 36.315 72.820 42.773 1.00 53.24 C
ATOM 12 O2' G B 732 37.229 73.836 42.426 1.00 52.63 O
ATOM 13 C1' G B 732 36.732 71.540 42.049 1.00 55.87 C
ATOM 14 N9 G B 732 35.646 70.681 41.587 1.00 59.49 N
ATOM 15 C8 G B 732 34.453 70.400 42.215 1.00 59.66 C
ATOM 16 N7 G B 732 33.716 69.553 41.550 1.00 60.10 N
ATOM 17 C5 G B 732 34.465 69.263 40.418 1.00 61.03 C
ATOM 18 C6 G B 732 34.192 68.393 39.336 1.00 61.54 C
ATOM 19 O6 G B 732 33.213 67.655 39.171 1.00 61.83 O
ATOM 20 N1 G B 732 35.213 68.421 38.387 1.00 62.52 N
ATOM 21 C2 G B 732 36.360 69.179 38.480 1.00 62.77 C
ATOM 22 N2 G B 732 37.231 69.087 37.461 1.00 63.08 N
ATOM 23 N3 G B 732 36.633 69.972 39.496 1.00 62.06 N
ATOM 24 C4 G B 732 35.649 69.967 40.420 1.00 60.82 C
ATOM 25 P A B 733 36.636 73.513 46.600 1.00 46.38 P
ATOM 26 OP1 A B 733 37.806 72.743 47.097 1.00 44.24 O
ATOM 27 OP2 A B 733 35.264 73.107 46.989 1.00 45.41 O
ATOM 28 O5' A B 733 36.833 75.043 47.007 1.00 47.26 O
TER

Atoms:
OP1: (31.106,77.237,34.667)
OP2: (30.194,77.568,37.041)
C3': (35.908,76.212,34.914)
C1': (36.642,76.904,37.036)
C5': (33.486,76.186,35.799)
O4': (35.300,77.321,36.940)
C8: (36.537,75.508,39.164)
O2': (38.124,75.523,35.698)
C6: (38.584,77.173,41.492)
C5: (37.793,76.630,40.459)
C4: (37.748,77.330,39.271)
P: (31.309,77.682,36.072)
C4': (34.778,76.949,35.635)
C2': (36.773,75.730,36.070)
C2: (39.078,78.909,40.049)
N1: (39.221,78.342,41.249)
N3: (38.375,78.492,38.998)
N6: (38.742,76.590,42.686)
N7: (37.016,75.484,40.382)
N9: (36.947,76.588,38.430)
O5': (32.583,76.917,36.655)
O3': (36.693,77.119,34.145)
OP1: (36.437,68.571,47.543)
OP2: (34.933,67.665,45.674)
C3': (36.441,72.402,44.231)
C1': (36.732,71.540,42.049)
C5': (37.619,70.403,45.292)
O6: (33.213,67.655,39.171)
O4': (37.545,70.786,42.923)
C8: (34.453,70.400,42.215)
C2: (36.360,69.179,38.480)
C6: (34.192,68.393,39.336)
C5: (34.465,69.263,40.418)
C4: (35.649,69.967,40.420)
P: (36.200,68.311,46.099)
C4': (37.627,71.451,44.205)
C2': (36.315,72.820,42.773)
O2': (37.229,73.836,42.426)
N1: (35.213,68.421,38.387)
N2: (37.231,69.087,37.461)
N3: (36.633,69.972,39.496)
N7: (33.716,69.553,41.550)
N9: (35.646,70.681,41.587)
O5': (36.373,69.659,45.265)
O3': (36.742,73.552,45.003)
Image (generated by PyMOL):
PyMOL image
show in jmol