Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01943:01941
Extra
PDB:
ATOM 1 O3' U A1942 92.946 125.030 117.571 1.00 39.34 O
ATOM 2 P A A1943 94.401 125.544 117.175 1.00 44.26 P
ATOM 3 OP1 A A1943 94.868 124.805 115.973 1.00 45.15 O
ATOM 4 OP2 A A1943 95.216 125.521 118.411 1.00 46.88 O
ATOM 5 O5' A A1943 94.157 127.060 116.769 1.00 43.26 O
ATOM 6 C5' A A1943 93.147 127.403 115.823 1.00 41.46 C
ATOM 7 C4' A A1943 93.119 128.888 115.614 1.00 39.58 C
ATOM 8 O4' A A1943 92.739 129.549 116.845 1.00 37.59 O
ATOM 9 C3' A A1943 94.445 129.524 115.255 1.00 38.58 C
ATOM 10 O3' A A1943 94.737 129.379 113.875 1.00 39.44 O
ATOM 11 C2' A A1943 94.196 130.975 115.627 1.00 40.50 C
ATOM 12 O2' A A1943 93.422 131.657 114.666 1.00 44.26 O
ATOM 13 C1' A A1943 93.367 130.818 116.903 1.00 39.98 C
ATOM 14 N9 A A1943 94.186 130.887 118.113 1.00 41.05 N
ATOM 15 C8 A A1943 94.295 129.963 119.123 1.00 41.59 C
ATOM 16 N7 A A1943 95.106 130.325 120.082 1.00 42.22 N
ATOM 17 C5 A A1943 95.569 131.571 119.678 1.00 41.43 C
ATOM 18 C6 A A1943 96.471 132.484 120.259 1.00 41.13 C
ATOM 19 N6 A A1943 97.111 132.265 121.411 1.00 41.00 N
ATOM 20 N1 A A1943 96.707 133.637 119.600 1.00 39.53 N
ATOM 21 C2 A A1943 96.089 133.841 118.427 1.00 39.86 C
ATOM 22 N3 A A1943 95.237 133.058 117.775 1.00 38.93 N
ATOM 23 C4 A A1943 95.012 131.927 118.465 1.00 40.17 C
ATOM 24 P G A1944 96.226 128.999 113.411 1.00 41.29 P
ATOM 25 OP1 G A1944 96.261 128.959 111.927 1.00 41.21 O
ATOM 26 OP2 G A1944 96.637 127.806 114.178 1.00 42.55 O
ATOM 27 O5' G A1944 97.094 130.249 113.872 1.00 43.08 O
TER
ATOM 1 O3' A B1940 92.522 129.607 128.934 1.00 45.19 O
ATOM 2 P G B1941 93.692 129.449 127.853 1.00 49.18 P
ATOM 3 OP1 G B1941 93.729 128.015 127.462 1.00 48.01 O
ATOM 4 OP2 G B1941 94.922 130.097 128.379 1.00 49.83 O
ATOM 5 O5' G B1941 93.176 130.310 126.617 1.00 48.47 O
ATOM 6 C5' G B1941 91.959 129.962 125.948 1.00 45.39 C
ATOM 7 C4' G B1941 92.162 129.969 124.457 1.00 43.07 C
ATOM 8 O4' G B1941 92.133 131.336 123.978 1.00 43.54 O
ATOM 9 C3' G B1941 93.460 129.363 123.936 1.00 41.42 C
ATOM 10 O3' G B1941 93.194 128.701 122.716 1.00 40.69 O
ATOM 11 C2' G B1941 94.306 130.599 123.657 1.00 41.83 C
ATOM 12 O2' G B1941 95.258 130.414 122.644 1.00 41.33 O
ATOM 13 C1' G B1941 93.251 131.570 123.155 1.00 43.71 C
ATOM 14 N9 G B1941 93.623 132.975 123.266 1.00 46.23 N
ATOM 15 C8 G B1941 94.009 133.638 124.403 1.00 47.58 C
ATOM 16 N7 G B1941 94.292 134.893 124.192 1.00 49.83 N
ATOM 17 C5 G B1941 94.083 135.071 122.831 1.00 48.82 C
ATOM 18 C6 G B1941 94.245 136.227 122.020 1.00 49.29 C
ATOM 19 O6 G B1941 94.647 137.347 122.345 1.00 50.47 O
ATOM 20 N1 G B1941 93.900 135.978 120.700 1.00 49.46 N
ATOM 21 C2 G B1941 93.475 134.773 120.213 1.00 50.16 C
ATOM 22 N2 G B1941 93.188 134.746 118.902 1.00 50.54 N
ATOM 23 N3 G B1941 93.340 133.678 120.952 1.00 48.88 N
ATOM 24 C4 G B1941 93.658 133.901 122.245 1.00 47.87 C
ATOM 25 P U B1942 93.972 127.346 122.360 1.00 41.63 P
ATOM 26 OP1 U B1942 93.644 126.363 123.413 1.00 41.20 O
ATOM 27 OP2 U B1942 95.391 127.647 122.058 1.00 40.23 O
ATOM 28 O5' U B1942 93.302 126.873 120.995 1.00 42.71 O
TER
ATOM 2 P A A1943 94.401 125.544 117.175 1.00 44.26 P
ATOM 3 OP1 A A1943 94.868 124.805 115.973 1.00 45.15 O
ATOM 4 OP2 A A1943 95.216 125.521 118.411 1.00 46.88 O
ATOM 5 O5' A A1943 94.157 127.060 116.769 1.00 43.26 O
ATOM 6 C5' A A1943 93.147 127.403 115.823 1.00 41.46 C
ATOM 7 C4' A A1943 93.119 128.888 115.614 1.00 39.58 C
ATOM 8 O4' A A1943 92.739 129.549 116.845 1.00 37.59 O
ATOM 9 C3' A A1943 94.445 129.524 115.255 1.00 38.58 C
ATOM 10 O3' A A1943 94.737 129.379 113.875 1.00 39.44 O
ATOM 11 C2' A A1943 94.196 130.975 115.627 1.00 40.50 C
ATOM 12 O2' A A1943 93.422 131.657 114.666 1.00 44.26 O
ATOM 13 C1' A A1943 93.367 130.818 116.903 1.00 39.98 C
ATOM 14 N9 A A1943 94.186 130.887 118.113 1.00 41.05 N
ATOM 15 C8 A A1943 94.295 129.963 119.123 1.00 41.59 C
ATOM 16 N7 A A1943 95.106 130.325 120.082 1.00 42.22 N
ATOM 17 C5 A A1943 95.569 131.571 119.678 1.00 41.43 C
ATOM 18 C6 A A1943 96.471 132.484 120.259 1.00 41.13 C
ATOM 19 N6 A A1943 97.111 132.265 121.411 1.00 41.00 N
ATOM 20 N1 A A1943 96.707 133.637 119.600 1.00 39.53 N
ATOM 21 C2 A A1943 96.089 133.841 118.427 1.00 39.86 C
ATOM 22 N3 A A1943 95.237 133.058 117.775 1.00 38.93 N
ATOM 23 C4 A A1943 95.012 131.927 118.465 1.00 40.17 C
ATOM 24 P G A1944 96.226 128.999 113.411 1.00 41.29 P
ATOM 25 OP1 G A1944 96.261 128.959 111.927 1.00 41.21 O
ATOM 26 OP2 G A1944 96.637 127.806 114.178 1.00 42.55 O
ATOM 27 O5' G A1944 97.094 130.249 113.872 1.00 43.08 O
TER
ATOM 1 O3' A B1940 92.522 129.607 128.934 1.00 45.19 O
ATOM 2 P G B1941 93.692 129.449 127.853 1.00 49.18 P
ATOM 3 OP1 G B1941 93.729 128.015 127.462 1.00 48.01 O
ATOM 4 OP2 G B1941 94.922 130.097 128.379 1.00 49.83 O
ATOM 5 O5' G B1941 93.176 130.310 126.617 1.00 48.47 O
ATOM 6 C5' G B1941 91.959 129.962 125.948 1.00 45.39 C
ATOM 7 C4' G B1941 92.162 129.969 124.457 1.00 43.07 C
ATOM 8 O4' G B1941 92.133 131.336 123.978 1.00 43.54 O
ATOM 9 C3' G B1941 93.460 129.363 123.936 1.00 41.42 C
ATOM 10 O3' G B1941 93.194 128.701 122.716 1.00 40.69 O
ATOM 11 C2' G B1941 94.306 130.599 123.657 1.00 41.83 C
ATOM 12 O2' G B1941 95.258 130.414 122.644 1.00 41.33 O
ATOM 13 C1' G B1941 93.251 131.570 123.155 1.00 43.71 C
ATOM 14 N9 G B1941 93.623 132.975 123.266 1.00 46.23 N
ATOM 15 C8 G B1941 94.009 133.638 124.403 1.00 47.58 C
ATOM 16 N7 G B1941 94.292 134.893 124.192 1.00 49.83 N
ATOM 17 C5 G B1941 94.083 135.071 122.831 1.00 48.82 C
ATOM 18 C6 G B1941 94.245 136.227 122.020 1.00 49.29 C
ATOM 19 O6 G B1941 94.647 137.347 122.345 1.00 50.47 O
ATOM 20 N1 G B1941 93.900 135.978 120.700 1.00 49.46 N
ATOM 21 C2 G B1941 93.475 134.773 120.213 1.00 50.16 C
ATOM 22 N2 G B1941 93.188 134.746 118.902 1.00 50.54 N
ATOM 23 N3 G B1941 93.340 133.678 120.952 1.00 48.88 N
ATOM 24 C4 G B1941 93.658 133.901 122.245 1.00 47.87 C
ATOM 25 P U B1942 93.972 127.346 122.360 1.00 41.63 P
ATOM 26 OP1 U B1942 93.644 126.363 123.413 1.00 41.20 O
ATOM 27 OP2 U B1942 95.391 127.647 122.058 1.00 40.23 O
ATOM 28 O5' U B1942 93.302 126.873 120.995 1.00 42.71 O
TER
Atoms:
OP1: (94.868,124.805,115.973)
OP2: (95.216,125.521,118.411)
C3': (94.445,129.524,115.255)
C1': (93.367,130.818,116.903)
C5': (93.147,127.403,115.823)
O4': (92.739,129.549,116.845)
C8: (94.295,129.963,119.123)
O2': (93.422,131.657,114.666)
C6: (96.471,132.484,120.259)
C5: (95.569,131.571,119.678)
C4: (95.012,131.927,118.465)
P: (94.401,125.544,117.175)
C4': (93.119,128.888,115.614)
C2': (94.196,130.975,115.627)
C2: (96.089,133.841,118.427)
N1: (96.707,133.637,119.600)
N3: (95.237,133.058,117.775)
N6: (97.111,132.265,121.411)
N7: (95.106,130.325,120.082)
N9: (94.186,130.887,118.113)
O5': (94.157,127.060,116.769)
O3': (94.737,129.379,113.875)
OP2: (95.216,125.521,118.411)
C3': (94.445,129.524,115.255)
C1': (93.367,130.818,116.903)
C5': (93.147,127.403,115.823)
O4': (92.739,129.549,116.845)
C8: (94.295,129.963,119.123)
O2': (93.422,131.657,114.666)
C6: (96.471,132.484,120.259)
C5: (95.569,131.571,119.678)
C4: (95.012,131.927,118.465)
P: (94.401,125.544,117.175)
C4': (93.119,128.888,115.614)
C2': (94.196,130.975,115.627)
C2: (96.089,133.841,118.427)
N1: (96.707,133.637,119.600)
N3: (95.237,133.058,117.775)
N6: (97.111,132.265,121.411)
N7: (95.106,130.325,120.082)
N9: (94.186,130.887,118.113)
O5': (94.157,127.060,116.769)
O3': (94.737,129.379,113.875)
OP1: (93.729,128.015,127.462)
OP2: (94.922,130.097,128.379)
C3': (93.460,129.363,123.936)
C1': (93.251,131.570,123.155)
C5': (91.959,129.962,125.948)
O6: (94.647,137.347,122.345)
O4': (92.133,131.336,123.978)
C8: (94.009,133.638,124.403)
C2: (93.475,134.773,120.213)
C6: (94.245,136.227,122.020)
C5: (94.083,135.071,122.831)
C4: (93.658,133.901,122.245)
P: (93.692,129.449,127.853)
C4': (92.162,129.969,124.457)
C2': (94.306,130.599,123.657)
O2': (95.258,130.414,122.644)
N1: (93.900,135.978,120.700)
N2: (93.188,134.746,118.902)
N3: (93.340,133.678,120.952)
N7: (94.292,134.893,124.192)
N9: (93.623,132.975,123.266)
O5': (93.176,130.310,126.617)
O3': (93.194,128.701,122.716)
OP2: (94.922,130.097,128.379)
C3': (93.460,129.363,123.936)
C1': (93.251,131.570,123.155)
C5': (91.959,129.962,125.948)
O6: (94.647,137.347,122.345)
O4': (92.133,131.336,123.978)
C8: (94.009,133.638,124.403)
C2: (93.475,134.773,120.213)
C6: (94.245,136.227,122.020)
C5: (94.083,135.071,122.831)
C4: (93.658,133.901,122.245)
P: (93.692,129.449,127.853)
C4': (92.162,129.969,124.457)
C2': (94.306,130.599,123.657)
O2': (95.258,130.414,122.644)
N1: (93.900,135.978,120.700)
N2: (93.188,134.746,118.902)
N3: (93.340,133.678,120.952)
N7: (94.292,134.893,124.192)
N9: (93.623,132.975,123.266)
O5': (93.176,130.310,126.617)
O3': (93.194,128.701,122.716)
Image (generated by PyMOL):