ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1621:1729

Extra

PDB:
ATOM 1 O3' G A 620 84.236 -54.146 81.417 1.00 44.74 O
ATOM 2 P A A 621 84.505 -55.451 80.493 1.00 48.62 P
ATOM 3 OP1 A A 621 85.331 -56.352 81.270 1.00 49.17 O
ATOM 4 OP2 A A 621 85.017 -54.981 79.181 1.00 48.45 O
ATOM 5 O5' A A 621 83.035 -56.073 80.326 1.00 48.48 O
ATOM 6 C5' A A 621 82.546 -57.108 81.191 1.00 48.79 C
ATOM 7 C4' A A 621 81.565 -56.579 82.214 1.00 48.54 C
ATOM 8 O4' A A 621 80.536 -55.801 81.542 1.00 48.01 O
ATOM 9 C3' A A 621 80.811 -57.634 83.055 1.00 48.81 C
ATOM 10 O3' A A 621 80.611 -57.149 84.386 1.00 48.79 O
ATOM 11 C2' A A 621 79.437 -57.659 82.399 1.00 48.47 C
ATOM 12 O2' A A 621 78.403 -58.106 83.268 1.00 48.51 O
ATOM 13 C1' A A 621 79.282 -56.180 82.066 1.00 47.94 C
ATOM 14 N9 A A 621 78.247 -55.853 81.092 1.00 47.53 N
ATOM 15 C8 A A 621 78.138 -56.296 79.802 1.00 47.51 C
ATOM 16 N7 A A 621 77.134 -55.779 79.163 1.00 47.10 N
ATOM 17 C5 A A 621 76.563 -54.940 80.105 1.00 46.84 C
ATOM 18 C6 A A 621 75.465 -54.116 80.016 1.00 46.39 C
ATOM 19 N6 A A 621 74.785 -54.050 78.901 1.00 46.14 N
ATOM 20 N1 A A 621 75.152 -53.385 81.082 1.00 46.23 N
ATOM 21 C2 A A 621 75.892 -53.490 82.191 1.00 46.52 C
ATOM 22 N3 A A 621 76.945 -54.241 82.413 1.00 46.95 N
ATOM 23 C4 A A 621 77.238 -54.950 81.305 1.00 47.09 C
ATOM 24 P G A 622 81.814 -57.035 85.423 1.00 42.43 P
ATOM 25 OP1 G A 622 82.642 -58.256 85.264 1.00 42.97 O
ATOM 26 OP2 G A 622 81.200 -56.738 86.763 1.00 42.40 O
ATOM 27 O5' G A 622 82.593 -55.764 84.896 1.00 42.13 O
TER

ATOM 1 O3' A B 728 78.277 -62.031 72.207 1.00 58.67 O
ATOM 2 P G B 729 78.235 -60.486 71.795 1.00 55.76 P
ATOM 3 OP1 G B 729 77.105 -60.281 70.869 1.00 55.44 O
ATOM 4 OP2 G B 729 79.607 -60.091 71.357 1.00 55.86 O
ATOM 5 O5' G B 729 77.935 -59.829 73.185 1.00 55.56 O
ATOM 6 C5' G B 729 77.487 -58.507 73.281 1.00 55.05 C
ATOM 7 C4' G B 729 76.200 -58.455 74.028 1.00 54.84 C
ATOM 8 O4' G B 729 76.261 -59.335 75.178 1.00 55.22 O
ATOM 9 C3' G B 729 75.811 -57.100 74.529 1.00 54.38 C
ATOM 10 O3' G B 729 74.404 -56.963 74.351 1.00 54.08 O
ATOM 11 C2' G B 729 76.181 -57.135 76.015 1.00 54.56 C
ATOM 12 O2' G B 729 75.379 -56.318 76.851 1.00 54.23 O
ATOM 13 C1' G B 729 76.027 -58.610 76.366 1.00 55.03 C
ATOM 14 N9 G B 729 76.974 -59.077 77.400 1.00 55.43 N
ATOM 15 C8 G B 729 76.616 -59.742 78.527 1.00 55.68 C
ATOM 16 N7 G B 729 77.643 -60.013 79.301 1.00 56.03 N
ATOM 17 C5 G B 729 78.768 -59.496 78.676 1.00 56.02 C
ATOM 18 C6 G B 729 80.165 -59.480 79.035 1.00 56.32 C
ATOM 19 O6 G B 729 80.742 -59.941 80.020 1.00 56.69 O
ATOM 20 N1 G B 729 80.990 -58.850 78.123 1.00 56.19 N
ATOM 21 C2 G B 729 80.529 -58.295 76.983 1.00 55.82 C
ATOM 22 N2 G B 729 81.463 -57.713 76.211 1.00 55.76 N
ATOM 23 N3 G B 729 79.235 -58.305 76.644 1.00 55.54 N
ATOM 24 C4 G B 729 78.374 -58.909 77.505 1.00 55.65 C
ATOM 25 P A B 730 73.826 -55.763 73.445 1.00 47.89 P
ATOM 26 OP1 A B 730 72.349 -56.001 73.274 1.00 47.72 O
ATOM 27 OP2 A B 730 74.710 -55.676 72.241 1.00 47.95 O
ATOM 28 O5' A B 730 74.090 -54.508 74.401 1.00 47.62 O
TER

Atoms:
OP1: (85.331,-56.352,81.270)
OP2: (85.017,-54.981,79.181)
C3': (80.811,-57.634,83.055)
C1': (79.282,-56.180,82.066)
C5': (82.546,-57.108,81.191)
O4': (80.536,-55.801,81.542)
C8: (78.138,-56.296,79.802)
O2': (78.403,-58.106,83.268)
C6: (75.465,-54.116,80.016)
C5: (76.563,-54.940,80.105)
C4: (77.238,-54.950,81.305)
P: (84.505,-55.451,80.493)
C4': (81.565,-56.579,82.214)
C2': (79.437,-57.659,82.399)
C2: (75.892,-53.490,82.191)
N1: (75.152,-53.385,81.082)
N3: (76.945,-54.241,82.413)
N6: (74.785,-54.050,78.901)
N7: (77.134,-55.779,79.163)
N9: (78.247,-55.853,81.092)
O5': (83.035,-56.073,80.326)
O3': (80.611,-57.149,84.386)
OP1: (77.105,-60.281,70.869)
OP2: (79.607,-60.091,71.357)
C3': (75.811,-57.100,74.529)
C1': (76.027,-58.610,76.366)
C5': (77.487,-58.507,73.281)
O6: (80.742,-59.941,80.020)
O4': (76.261,-59.335,75.178)
C8: (76.616,-59.742,78.527)
C2: (80.529,-58.295,76.983)
C6: (80.165,-59.480,79.035)
C5: (78.768,-59.496,78.676)
C4: (78.374,-58.909,77.505)
P: (78.235,-60.486,71.795)
C4': (76.200,-58.455,74.028)
C2': (76.181,-57.135,76.015)
O2': (75.379,-56.318,76.851)
N1: (80.990,-58.850,78.123)
N2: (81.463,-57.713,76.211)
N3: (79.235,-58.305,76.644)
N7: (77.643,-60.013,79.301)
N9: (76.974,-59.077,77.400)
O5': (77.935,-59.829,73.185)
O3': (74.404,-56.963,74.351)
Image (generated by PyMOL):
PyMOL image
show in jmol