ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3P22:A19:A17

Extra

PDB:
ATOM 1 O3' A A 18 26.531 14.091 -4.543 1.00 47.29 O
ATOM 2 P A A 19 25.639 13.978 -3.209 1.00 44.52 P
ATOM 3 OP1 A A 19 24.473 14.857 -3.384 1.00 45.72 O
ATOM 4 OP2 A A 19 26.489 14.111 -2.023 1.00 45.02 O
ATOM 5 O5' A A 19 25.121 12.486 -3.340 1.00 46.16 O
ATOM 6 C5' A A 19 25.024 11.625 -2.263 1.00 45.32 C
ATOM 7 C4' A A 19 25.385 10.231 -2.720 1.00 46.45 C
ATOM 8 O4' A A 19 26.682 10.264 -3.355 1.00 47.06 O
ATOM 9 C3' A A 19 25.553 9.300 -1.551 1.00 46.48 C
ATOM 10 O3' A A 19 24.340 8.637 -1.327 1.00 46.45 O
ATOM 11 C2' A A 19 26.724 8.393 -1.926 1.00 47.40 C
ATOM 12 O2' A A 19 26.357 7.301 -2.736 1.00 48.83 O
ATOM 13 C1' A A 19 27.570 9.355 -2.725 1.00 48.36 C
ATOM 14 N9 A A 19 28.541 10.121 -1.955 1.00 48.91 N
ATOM 15 C8 A A 19 28.518 11.469 -1.720 1.00 49.14 C
ATOM 16 N7 A A 19 29.545 11.907 -1.022 1.00 49.36 N
ATOM 17 C5 A A 19 30.277 10.761 -0.789 1.00 49.61 C
ATOM 18 C6 A A 19 31.465 10.548 -0.103 1.00 49.36 C
ATOM 19 N6 A A 19 32.120 11.549 0.464 1.00 50.46 N
ATOM 20 N1 A A 19 31.954 9.290 -0.041 1.00 50.48 N
ATOM 21 C2 A A 19 31.286 8.302 -0.638 1.00 49.97 C
ATOM 22 N3 A A 19 30.139 8.393 -1.317 1.00 52.08 N
ATOM 23 C4 A A 19 29.685 9.655 -1.359 1.00 49.78 C
ATOM 24 P A A 20 23.778 8.631 0.156 1.00 45.18 P
ATOM 25 OP1 A A 20 22.556 7.831 0.233 1.00 46.73 O
ATOM 26 OP2 A A 20 23.717 10.052 0.599 1.00 43.24 O
ATOM 27 O5' A A 20 24.920 7.803 0.915 1.00 44.68 O
TER

ATOM 1 O3' C B 16 31.077 21.192 2.024 1.00 44.58 O
ATOM 2 P G B 17 30.827 21.016 0.440 1.00 45.32 P
ATOM 3 OP1 G B 17 32.081 21.422 -0.233 1.00 49.52 O
ATOM 4 OP2 G B 17 29.573 21.670 0.050 1.00 43.93 O
ATOM 5 O5' G B 17 30.612 19.449 0.232 1.00 44.41 O
ATOM 6 C5' G B 17 31.699 18.560 0.290 1.00 43.79 C
ATOM 7 C4' G B 17 31.190 17.140 0.214 1.00 44.00 C
ATOM 8 O4' G B 17 30.307 16.832 1.336 1.00 45.15 O
ATOM 9 C3' G B 17 30.328 16.792 -0.988 1.00 43.89 C
ATOM 10 O3' G B 17 31.145 16.685 -2.124 1.00 43.30 O
ATOM 11 C2' G B 17 29.812 15.439 -0.495 1.00 43.57 C
ATOM 12 O2' G B 17 30.783 14.408 -0.556 1.00 44.35 O
ATOM 13 C1' G B 17 29.442 15.782 0.963 1.00 42.36 C
ATOM 14 N9 G B 17 28.072 16.252 0.965 1.00 41.13 N
ATOM 15 C8 G B 17 27.604 17.529 0.848 1.00 41.01 C
ATOM 16 N7 G B 17 26.305 17.608 0.805 1.00 40.77 N
ATOM 17 C5 G B 17 25.894 16.293 0.879 1.00 41.49 C
ATOM 18 C6 G B 17 24.597 15.745 0.883 1.00 42.00 C
ATOM 19 O6 G B 17 23.519 16.377 0.818 1.00 43.92 O
ATOM 20 N1 G B 17 24.628 14.339 0.968 1.00 40.18 N
ATOM 21 C2 G B 17 25.777 13.575 1.056 1.00 39.90 C
ATOM 22 N2 G B 17 25.669 12.229 1.144 1.00 37.63 N
ATOM 23 N3 G B 17 26.990 14.102 1.057 1.00 40.59 N
ATOM 24 C4 G B 17 26.970 15.450 0.964 1.00 41.29 C
ATOM 25 P A B 18 30.675 17.107 -3.585 1.00 43.05 P
ATOM 26 OP1 A B 18 31.846 16.913 -4.448 1.00 47.17 O
ATOM 27 OP2 A B 18 29.966 18.401 -3.596 1.00 43.42 O
ATOM 28 O5' A B 18 29.624 15.997 -3.966 1.00 44.49 O
TER

Atoms:
OP1: (24.473,14.857,-3.384)
OP2: (26.489,14.111,-2.023)
C3': (25.553,9.300,-1.551)
C1': (27.570,9.355,-2.725)
C5': (25.024,11.625,-2.263)
O4': (26.682,10.264,-3.355)
C8: (28.518,11.469,-1.720)
O2': (26.357,7.301,-2.736)
C6: (31.465,10.548,-0.103)
C5: (30.277,10.761,-0.789)
C4: (29.685,9.655,-1.359)
P: (25.639,13.978,-3.209)
C4': (25.385,10.231,-2.720)
C2': (26.724,8.393,-1.926)
C2: (31.286,8.302,-0.638)
N1: (31.954,9.290,-0.041)
N3: (30.139,8.393,-1.317)
N6: (32.120,11.549,0.464)
N7: (29.545,11.907,-1.022)
N9: (28.541,10.121,-1.955)
O5': (25.121,12.486,-3.340)
O3': (24.340,8.637,-1.327)
OP1: (32.081,21.422,-0.233)
OP2: (29.573,21.670,0.050)
C3': (30.328,16.792,-0.988)
C1': (29.442,15.782,0.963)
C5': (31.699,18.560,0.290)
O6: (23.519,16.377,0.818)
O4': (30.307,16.832,1.336)
C8: (27.604,17.529,0.848)
C2: (25.777,13.575,1.056)
C6: (24.597,15.745,0.883)
C5: (25.894,16.293,0.879)
C4: (26.970,15.450,0.964)
P: (30.827,21.016,0.440)
C4': (31.190,17.140,0.214)
C2': (29.812,15.439,-0.495)
O2': (30.783,14.408,-0.556)
N1: (24.628,14.339,0.968)
N2: (25.669,12.229,1.144)
N3: (26.990,14.102,1.057)
N7: (26.305,17.608,0.805)
N9: (28.072,16.252,0.965)
O5': (30.612,19.449,0.232)
O3': (31.145,16.685,-2.124)
Image (generated by PyMOL):
PyMOL image
show in jmol