ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:0948:0945

Extra

PDB:
ATOM 1 O3' G A 947 64.859 51.943 120.222 1.00 89.46 O
ATOM 2 P A A 948 63.380 51.553 119.700 1.00 87.26 P
ATOM 3 OP1 A A 948 62.402 52.543 120.220 1.00 87.60 O
ATOM 4 OP2 A A 948 63.164 50.111 119.975 1.00 89.00 O
ATOM 5 O5' A A 948 63.476 51.718 118.117 1.00 82.84 O
ATOM 6 C5' A A 948 64.171 50.744 117.309 1.00 76.97 C
ATOM 7 C4' A A 948 64.416 51.285 115.918 1.00 72.88 C
ATOM 8 O4' A A 948 63.147 51.676 115.328 1.00 71.47 O
ATOM 9 C3' A A 948 65.265 52.542 115.833 1.00 70.81 C
ATOM 10 O3' A A 948 66.657 52.242 115.880 1.00 69.43 O
ATOM 11 C2' A A 948 64.825 53.135 114.499 1.00 69.96 C
ATOM 12 O2' A A 948 65.399 52.495 113.377 1.00 69.80 O
ATOM 13 C1' A A 948 63.325 52.836 114.527 1.00 68.78 C
ATOM 14 N9 A A 948 62.544 53.926 115.116 1.00 66.54 N
ATOM 15 C8 A A 948 61.747 53.880 116.232 1.00 65.20 C
ATOM 16 N7 A A 948 61.202 55.030 116.540 1.00 65.54 N
ATOM 17 C5 A A 948 61.665 55.893 115.558 1.00 65.03 C
ATOM 18 C6 A A 948 61.452 57.264 115.325 1.00 64.09 C
ATOM 19 N6 A A 948 60.707 58.044 116.109 1.00 63.14 N
ATOM 20 N1 A A 948 62.043 57.814 114.245 1.00 64.43 N
ATOM 21 C2 A A 948 62.802 57.036 113.462 1.00 65.09 C
ATOM 22 N3 A A 948 63.086 55.742 113.582 1.00 65.29 N
ATOM 23 C4 A A 948 62.479 55.223 114.664 1.00 65.77 C
ATOM 24 P C A 949 67.722 53.409 116.195 1.00 66.69 P
ATOM 25 OP1 C A 949 68.894 52.785 116.849 1.00 68.47 O
ATOM 26 OP2 C A 949 67.020 54.529 116.867 1.00 67.00 O
ATOM 27 O5' C A 949 68.187 53.894 114.755 1.00 66.21 O
TER

ATOM 1 O3' A B 944 54.539 62.448 121.242 1.00 55.29 O
ATOM 2 P G B 945 55.862 62.527 122.153 1.00 56.06 P
ATOM 3 OP1 G B 945 55.470 62.049 123.509 1.00 57.60 O
ATOM 4 OP2 G B 945 56.473 63.874 122.000 1.00 55.36 O
ATOM 5 O5' G B 945 56.854 61.472 121.492 1.00 54.40 O
ATOM 6 C5' G B 945 56.464 60.108 121.306 1.00 53.76 C
ATOM 7 C4' G B 945 57.396 59.428 120.336 1.00 55.65 C
ATOM 8 O4' G B 945 57.313 60.083 119.044 1.00 54.49 O
ATOM 9 C3' G B 945 58.876 59.484 120.675 1.00 57.16 C
ATOM 10 O3' G B 945 59.228 58.493 121.639 1.00 61.54 O
ATOM 11 C2' G B 945 59.515 59.240 119.314 1.00 55.74 C
ATOM 12 O2' G B 945 59.490 57.881 118.926 1.00 52.69 O
ATOM 13 C1' G B 945 58.575 60.030 118.401 1.00 54.58 C
ATOM 14 N9 G B 945 59.025 61.397 118.153 1.00 54.60 N
ATOM 15 C8 G B 945 58.638 62.537 118.827 1.00 54.71 C
ATOM 16 N7 G B 945 59.203 63.621 118.367 1.00 54.11 N
ATOM 17 C5 G B 945 60.014 63.171 117.330 1.00 52.94 C
ATOM 18 C6 G B 945 60.868 63.891 116.456 1.00 52.39 C
ATOM 19 O6 G B 945 61.083 65.101 116.419 1.00 55.85 O
ATOM 20 N1 G B 945 61.510 63.049 115.557 1.00 52.14 N
ATOM 21 C2 G B 945 61.354 61.688 115.501 1.00 52.32 C
ATOM 22 N2 G B 945 62.077 61.056 114.567 1.00 50.72 N
ATOM 23 N3 G B 945 60.553 61.000 116.306 1.00 51.50 N
ATOM 24 C4 G B 945 59.920 61.801 117.190 1.00 52.47 C
ATOM 25 P C B 946 60.608 58.618 122.459 1.00 62.71 P
ATOM 26 OP1 C B 946 60.555 57.569 123.509 1.00 65.17 O
ATOM 27 OP2 C B 946 60.844 60.032 122.849 1.00 62.11 O
ATOM 28 O5' C B 946 61.725 58.186 121.409 1.00 62.58 O
TER

Atoms:
OP1: (62.402,52.543,120.220)
OP2: (63.164,50.111,119.975)
C3': (65.265,52.542,115.833)
C1': (63.325,52.836,114.527)
C5': (64.171,50.744,117.309)
O4': (63.147,51.676,115.328)
C8: (61.747,53.880,116.232)
O2': (65.399,52.495,113.377)
C6: (61.452,57.264,115.325)
C5: (61.665,55.893,115.558)
C4: (62.479,55.223,114.664)
P: (63.380,51.553,119.700)
C4': (64.416,51.285,115.918)
C2': (64.825,53.135,114.499)
C2: (62.802,57.036,113.462)
N1: (62.043,57.814,114.245)
N3: (63.086,55.742,113.582)
N6: (60.707,58.044,116.109)
N7: (61.202,55.030,116.540)
N9: (62.544,53.926,115.116)
O5': (63.476,51.718,118.117)
O3': (66.657,52.242,115.880)
OP1: (55.470,62.049,123.509)
OP2: (56.473,63.874,122.000)
C3': (58.876,59.484,120.675)
C1': (58.575,60.030,118.401)
C5': (56.464,60.108,121.306)
O6: (61.083,65.101,116.419)
O4': (57.313,60.083,119.044)
C8: (58.638,62.537,118.827)
C2: (61.354,61.688,115.501)
C6: (60.868,63.891,116.456)
C5: (60.014,63.171,117.330)
C4: (59.920,61.801,117.190)
P: (55.862,62.527,122.153)
C4': (57.396,59.428,120.336)
C2': (59.515,59.240,119.314)
O2': (59.490,57.881,118.926)
N1: (61.510,63.049,115.557)
N2: (62.077,61.056,114.567)
N3: (60.553,61.000,116.306)
N7: (59.203,63.621,118.367)
N9: (59.025,61.397,118.153)
O5': (56.854,61.472,121.492)
O3': (59.228,58.493,121.639)
Image (generated by PyMOL):
PyMOL image
show in jmol