Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11974:11972
Extra
PDB:
ATOM 1 O3' A A1973 24.366 -19.945 114.881 1.00 45.53 O
ATOM 2 P A A1974 22.973 -19.780 115.672 1.00 45.34 P
ATOM 3 OP1 A A1974 22.141 -20.946 115.261 1.00 45.32 O
ATOM 4 OP2 A A1974 22.467 -18.417 115.411 1.00 45.24 O
ATOM 5 O5' A A1974 23.394 -19.938 117.195 1.00 45.79 O
ATOM 6 C5' A A1974 23.811 -21.210 117.672 1.00 45.99 C
ATOM 7 C4' A A1974 24.495 -21.108 118.992 1.00 46.37 C
ATOM 8 O4' A A1974 25.580 -20.173 118.893 1.00 46.25 O
ATOM 9 C3' A A1974 23.631 -20.610 120.129 1.00 46.75 C
ATOM 10 O3' A A1974 23.022 -21.690 120.783 1.00 47.05 O
ATOM 11 C2' A A1974 24.599 -19.863 121.021 1.00 46.97 C
ATOM 12 O2' A A1974 25.217 -20.767 121.907 1.00 47.29 O
ATOM 13 C1' A A1974 25.657 -19.383 120.041 1.00 46.59 C
ATOM 14 N9 A A1974 25.491 -17.996 119.623 1.00 46.41 N
ATOM 15 C8 A A1974 24.846 -17.650 118.482 1.00 46.05 C
ATOM 16 N7 A A1974 24.901 -16.365 118.251 1.00 45.94 N
ATOM 17 C5 A A1974 25.663 -15.847 119.278 1.00 46.23 C
ATOM 18 C6 A A1974 26.067 -14.540 119.567 1.00 46.29 C
ATOM 19 N6 A A1974 25.759 -13.483 118.847 1.00 46.05 N
ATOM 20 N1 A A1974 26.830 -14.363 120.645 1.00 46.62 N
ATOM 21 C2 A A1974 27.132 -15.460 121.375 1.00 46.87 C
ATOM 22 N3 A A1974 26.818 -16.741 121.210 1.00 46.85 N
ATOM 23 C4 A A1974 26.064 -16.863 120.125 1.00 46.52 C
ATOM 24 P A A1975 21.614 -21.552 121.508 1.00 57.85 P
ATOM 25 OP1 A A1975 21.226 -22.935 121.928 1.00 58.09 O
ATOM 26 OP2 A A1975 20.716 -20.797 120.610 1.00 57.56 O
ATOM 27 O5' A A1975 21.964 -20.681 122.776 1.00 58.21 O
TER
ATOM 1 O3' A B1971 19.693 -10.828 111.689 1.00 43.99 O
ATOM 2 P G B1972 20.665 -11.990 111.182 1.00 47.35 P
ATOM 3 OP1 G B1972 21.713 -11.345 110.387 1.00 47.07 O
ATOM 4 OP2 G B1972 19.865 -13.048 110.562 1.00 47.23 O
ATOM 5 O5' G B1972 21.255 -12.546 112.530 1.00 47.68 O
ATOM 6 C5' G B1972 22.529 -12.137 112.970 1.00 47.73 C
ATOM 7 C4' G B1972 22.872 -12.802 114.245 1.00 48.08 C
ATOM 8 O4' G B1972 21.727 -12.785 115.122 1.00 48.40 O
ATOM 9 C3' G B1972 23.227 -14.250 114.130 1.00 48.04 C
ATOM 10 O3' G B1972 24.560 -14.400 113.709 1.00 47.85 O
ATOM 11 C2' G B1972 22.971 -14.739 115.552 1.00 48.48 C
ATOM 12 O2' G B1972 24.014 -14.345 116.398 1.00 48.68 O
ATOM 13 C1' G B1972 21.743 -13.921 115.942 1.00 48.65 C
ATOM 14 N9 G B1972 20.514 -14.680 115.716 1.00 48.66 N
ATOM 15 C8 G B1972 19.643 -14.588 114.661 1.00 48.41 C
ATOM 16 N7 G B1972 18.662 -15.442 114.711 1.00 48.50 N
ATOM 17 C5 G B1972 18.965 -16.136 115.851 1.00 48.83 C
ATOM 18 C6 G B1972 18.274 -17.195 116.387 1.00 49.06 C
ATOM 19 O6 G B1972 17.251 -17.644 115.881 1.00 49.00 O
ATOM 20 N1 G B1972 18.852 -17.669 117.554 1.00 49.39 N
ATOM 21 C2 G B1972 19.969 -17.143 118.120 1.00 49.48 C
ATOM 22 N2 G B1972 20.378 -17.700 119.250 1.00 49.83 N
ATOM 23 N3 G B1972 20.634 -16.126 117.633 1.00 49.27 N
ATOM 24 C4 G B1972 20.077 -15.692 116.495 1.00 48.94 C
ATOM 25 P A B1973 25.003 -15.388 112.509 1.00 44.66 P
ATOM 26 OP1 A B1973 26.485 -15.133 112.295 1.00 44.54 O
ATOM 27 OP2 A B1973 24.082 -15.167 111.364 1.00 44.38 O
ATOM 28 O5' A B1973 24.796 -16.829 113.156 1.00 44.89 O
TER
ATOM 2 P A A1974 22.973 -19.780 115.672 1.00 45.34 P
ATOM 3 OP1 A A1974 22.141 -20.946 115.261 1.00 45.32 O
ATOM 4 OP2 A A1974 22.467 -18.417 115.411 1.00 45.24 O
ATOM 5 O5' A A1974 23.394 -19.938 117.195 1.00 45.79 O
ATOM 6 C5' A A1974 23.811 -21.210 117.672 1.00 45.99 C
ATOM 7 C4' A A1974 24.495 -21.108 118.992 1.00 46.37 C
ATOM 8 O4' A A1974 25.580 -20.173 118.893 1.00 46.25 O
ATOM 9 C3' A A1974 23.631 -20.610 120.129 1.00 46.75 C
ATOM 10 O3' A A1974 23.022 -21.690 120.783 1.00 47.05 O
ATOM 11 C2' A A1974 24.599 -19.863 121.021 1.00 46.97 C
ATOM 12 O2' A A1974 25.217 -20.767 121.907 1.00 47.29 O
ATOM 13 C1' A A1974 25.657 -19.383 120.041 1.00 46.59 C
ATOM 14 N9 A A1974 25.491 -17.996 119.623 1.00 46.41 N
ATOM 15 C8 A A1974 24.846 -17.650 118.482 1.00 46.05 C
ATOM 16 N7 A A1974 24.901 -16.365 118.251 1.00 45.94 N
ATOM 17 C5 A A1974 25.663 -15.847 119.278 1.00 46.23 C
ATOM 18 C6 A A1974 26.067 -14.540 119.567 1.00 46.29 C
ATOM 19 N6 A A1974 25.759 -13.483 118.847 1.00 46.05 N
ATOM 20 N1 A A1974 26.830 -14.363 120.645 1.00 46.62 N
ATOM 21 C2 A A1974 27.132 -15.460 121.375 1.00 46.87 C
ATOM 22 N3 A A1974 26.818 -16.741 121.210 1.00 46.85 N
ATOM 23 C4 A A1974 26.064 -16.863 120.125 1.00 46.52 C
ATOM 24 P A A1975 21.614 -21.552 121.508 1.00 57.85 P
ATOM 25 OP1 A A1975 21.226 -22.935 121.928 1.00 58.09 O
ATOM 26 OP2 A A1975 20.716 -20.797 120.610 1.00 57.56 O
ATOM 27 O5' A A1975 21.964 -20.681 122.776 1.00 58.21 O
TER
ATOM 1 O3' A B1971 19.693 -10.828 111.689 1.00 43.99 O
ATOM 2 P G B1972 20.665 -11.990 111.182 1.00 47.35 P
ATOM 3 OP1 G B1972 21.713 -11.345 110.387 1.00 47.07 O
ATOM 4 OP2 G B1972 19.865 -13.048 110.562 1.00 47.23 O
ATOM 5 O5' G B1972 21.255 -12.546 112.530 1.00 47.68 O
ATOM 6 C5' G B1972 22.529 -12.137 112.970 1.00 47.73 C
ATOM 7 C4' G B1972 22.872 -12.802 114.245 1.00 48.08 C
ATOM 8 O4' G B1972 21.727 -12.785 115.122 1.00 48.40 O
ATOM 9 C3' G B1972 23.227 -14.250 114.130 1.00 48.04 C
ATOM 10 O3' G B1972 24.560 -14.400 113.709 1.00 47.85 O
ATOM 11 C2' G B1972 22.971 -14.739 115.552 1.00 48.48 C
ATOM 12 O2' G B1972 24.014 -14.345 116.398 1.00 48.68 O
ATOM 13 C1' G B1972 21.743 -13.921 115.942 1.00 48.65 C
ATOM 14 N9 G B1972 20.514 -14.680 115.716 1.00 48.66 N
ATOM 15 C8 G B1972 19.643 -14.588 114.661 1.00 48.41 C
ATOM 16 N7 G B1972 18.662 -15.442 114.711 1.00 48.50 N
ATOM 17 C5 G B1972 18.965 -16.136 115.851 1.00 48.83 C
ATOM 18 C6 G B1972 18.274 -17.195 116.387 1.00 49.06 C
ATOM 19 O6 G B1972 17.251 -17.644 115.881 1.00 49.00 O
ATOM 20 N1 G B1972 18.852 -17.669 117.554 1.00 49.39 N
ATOM 21 C2 G B1972 19.969 -17.143 118.120 1.00 49.48 C
ATOM 22 N2 G B1972 20.378 -17.700 119.250 1.00 49.83 N
ATOM 23 N3 G B1972 20.634 -16.126 117.633 1.00 49.27 N
ATOM 24 C4 G B1972 20.077 -15.692 116.495 1.00 48.94 C
ATOM 25 P A B1973 25.003 -15.388 112.509 1.00 44.66 P
ATOM 26 OP1 A B1973 26.485 -15.133 112.295 1.00 44.54 O
ATOM 27 OP2 A B1973 24.082 -15.167 111.364 1.00 44.38 O
ATOM 28 O5' A B1973 24.796 -16.829 113.156 1.00 44.89 O
TER
Atoms:
OP1: (22.141,-20.946,115.261)
OP2: (22.467,-18.417,115.411)
C3': (23.631,-20.610,120.129)
C1': (25.657,-19.383,120.041)
C5': (23.811,-21.210,117.672)
O4': (25.580,-20.173,118.893)
C8: (24.846,-17.650,118.482)
O2': (25.217,-20.767,121.907)
C6: (26.067,-14.540,119.567)
C5: (25.663,-15.847,119.278)
C4: (26.064,-16.863,120.125)
P: (22.973,-19.780,115.672)
C4': (24.495,-21.108,118.992)
C2': (24.599,-19.863,121.021)
C2: (27.132,-15.460,121.375)
N1: (26.830,-14.363,120.645)
N3: (26.818,-16.741,121.210)
N6: (25.759,-13.483,118.847)
N7: (24.901,-16.365,118.251)
N9: (25.491,-17.996,119.623)
O5': (23.394,-19.938,117.195)
O3': (23.022,-21.690,120.783)
OP2: (22.467,-18.417,115.411)
C3': (23.631,-20.610,120.129)
C1': (25.657,-19.383,120.041)
C5': (23.811,-21.210,117.672)
O4': (25.580,-20.173,118.893)
C8: (24.846,-17.650,118.482)
O2': (25.217,-20.767,121.907)
C6: (26.067,-14.540,119.567)
C5: (25.663,-15.847,119.278)
C4: (26.064,-16.863,120.125)
P: (22.973,-19.780,115.672)
C4': (24.495,-21.108,118.992)
C2': (24.599,-19.863,121.021)
C2: (27.132,-15.460,121.375)
N1: (26.830,-14.363,120.645)
N3: (26.818,-16.741,121.210)
N6: (25.759,-13.483,118.847)
N7: (24.901,-16.365,118.251)
N9: (25.491,-17.996,119.623)
O5': (23.394,-19.938,117.195)
O3': (23.022,-21.690,120.783)
OP1: (21.713,-11.345,110.387)
OP2: (19.865,-13.048,110.562)
C3': (23.227,-14.250,114.130)
C1': (21.743,-13.921,115.942)
C5': (22.529,-12.137,112.970)
O6: (17.251,-17.644,115.881)
O4': (21.727,-12.785,115.122)
C8: (19.643,-14.588,114.661)
C2: (19.969,-17.143,118.120)
C6: (18.274,-17.195,116.387)
C5: (18.965,-16.136,115.851)
C4: (20.077,-15.692,116.495)
P: (20.665,-11.990,111.182)
C4': (22.872,-12.802,114.245)
C2': (22.971,-14.739,115.552)
O2': (24.014,-14.345,116.398)
N1: (18.852,-17.669,117.554)
N2: (20.378,-17.700,119.250)
N3: (20.634,-16.126,117.633)
N7: (18.662,-15.442,114.711)
N9: (20.514,-14.680,115.716)
O5': (21.255,-12.546,112.530)
O3': (24.560,-14.400,113.709)
OP2: (19.865,-13.048,110.562)
C3': (23.227,-14.250,114.130)
C1': (21.743,-13.921,115.942)
C5': (22.529,-12.137,112.970)
O6: (17.251,-17.644,115.881)
O4': (21.727,-12.785,115.122)
C8: (19.643,-14.588,114.661)
C2: (19.969,-17.143,118.120)
C6: (18.274,-17.195,116.387)
C5: (18.965,-16.136,115.851)
C4: (20.077,-15.692,116.495)
P: (20.665,-11.990,111.182)
C4': (22.872,-12.802,114.245)
C2': (22.971,-14.739,115.552)
O2': (24.014,-14.345,116.398)
N1: (18.852,-17.669,117.554)
N2: (20.378,-17.700,119.250)
N3: (20.634,-16.126,117.633)
N7: (18.662,-15.442,114.711)
N9: (20.514,-14.680,115.716)
O5': (21.255,-12.546,112.530)
O3': (24.560,-14.400,113.709)
Image (generated by PyMOL):