Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01016:01014
Extra
PDB:
ATOM 1 O3' U A1015 62.617 91.570 115.710 1.00 36.76 O
ATOM 2 P A A1016 61.724 91.342 114.396 1.00 37.06 P
ATOM 3 OP1 A A1016 60.753 90.259 114.698 1.00 37.50 O
ATOM 4 OP2 A A1016 62.655 91.196 113.256 1.00 36.95 O
ATOM 5 O5' A A1016 60.910 92.698 114.207 1.00 35.13 O
ATOM 6 C5' A A1016 59.919 93.098 115.167 1.00 35.87 C
ATOM 7 C4' A A1016 59.661 94.582 115.070 1.00 35.32 C
ATOM 8 O4' A A1016 60.934 95.267 115.074 1.00 35.97 O
ATOM 9 C3' A A1016 58.944 95.069 113.819 1.00 34.65 C
ATOM 10 O3' A A1016 57.535 95.024 114.068 1.00 36.48 O
ATOM 11 C2' A A1016 59.443 96.503 113.701 1.00 34.25 C
ATOM 12 O2' A A1016 58.795 97.355 114.623 1.00 33.19 O
ATOM 13 C1' A A1016 60.889 96.365 114.185 1.00 34.84 C
ATOM 14 N9 A A1016 61.916 96.151 113.162 1.00 33.75 N
ATOM 15 C8 A A1016 62.417 94.952 112.706 1.00 32.68 C
ATOM 16 N7 A A1016 63.374 95.080 111.824 1.00 30.86 N
ATOM 17 C5 A A1016 63.509 96.455 111.678 1.00 30.75 C
ATOM 18 C6 A A1016 64.370 97.245 110.891 1.00 29.09 C
ATOM 19 N6 A A1016 65.292 96.744 110.069 1.00 26.59 N
ATOM 20 N1 A A1016 64.248 98.584 110.982 1.00 28.73 N
ATOM 21 C2 A A1016 63.322 99.087 111.809 1.00 30.56 C
ATOM 22 N3 A A1016 62.458 98.452 112.599 1.00 29.27 N
ATOM 23 C4 A A1016 62.607 97.125 112.487 1.00 31.02 C
ATOM 24 P A A1017 56.498 94.777 112.864 1.00 38.35 P
ATOM 25 OP1 A A1017 55.145 94.649 113.462 1.00 34.92 O
ATOM 26 OP2 A A1017 57.015 93.690 111.996 1.00 36.72 O
ATOM 27 O5' A A1017 56.539 96.145 112.051 1.00 38.26 O
TER
ATOM 1 O3' G B1013 66.547 86.630 108.252 1.00 37.68 O
ATOM 2 P G B1014 66.742 86.884 109.823 1.00 36.85 P
ATOM 3 OP1 G B1014 68.181 86.725 110.129 1.00 39.11 O
ATOM 4 OP2 G B1014 65.747 86.046 110.532 1.00 39.07 O
ATOM 5 O5' G B1014 66.321 88.405 110.037 1.00 36.42 O
ATOM 6 C5' G B1014 67.159 89.486 109.586 1.00 34.46 C
ATOM 7 C4' G B1014 66.428 90.802 109.723 1.00 34.61 C
ATOM 8 O4' G B1014 65.225 90.772 108.907 1.00 35.33 O
ATOM 9 C3' G B1014 65.901 91.131 111.111 1.00 33.94 C
ATOM 10 O3' G B1014 66.898 91.671 111.960 1.00 35.15 O
ATOM 11 C2' G B1014 64.809 92.138 110.798 1.00 33.65 C
ATOM 12 O2' G B1014 65.333 93.414 110.499 1.00 34.38 O
ATOM 13 C1' G B1014 64.193 91.515 109.546 1.00 33.90 C
ATOM 14 N9 G B1014 63.125 90.590 109.913 1.00 34.15 N
ATOM 15 C8 G B1014 63.209 89.222 109.997 1.00 34.27 C
ATOM 16 N7 G B1014 62.112 88.670 110.431 1.00 34.73 N
ATOM 17 C5 G B1014 61.246 89.735 110.630 1.00 33.48 C
ATOM 18 C6 G B1014 59.918 89.755 111.112 1.00 33.46 C
ATOM 19 O6 G B1014 59.218 88.805 111.491 1.00 34.46 O
ATOM 20 N1 G B1014 59.409 91.047 111.144 1.00 33.34 N
ATOM 21 C2 G B1014 60.092 92.173 110.773 1.00 33.83 C
ATOM 22 N2 G B1014 59.425 93.330 110.870 1.00 33.51 N
ATOM 23 N3 G B1014 61.338 92.168 110.338 1.00 34.59 N
ATOM 24 C4 G B1014 61.849 90.924 110.292 1.00 33.53 C
ATOM 25 P U B1015 67.174 90.994 113.389 1.00 35.74 P
ATOM 26 OP1 U B1015 68.567 91.306 113.784 1.00 35.81 O
ATOM 27 OP2 U B1015 66.740 89.580 113.315 1.00 34.58 O
ATOM 28 O5' U B1015 66.190 91.750 114.384 1.00 35.20 O
TER
ATOM 2 P A A1016 61.724 91.342 114.396 1.00 37.06 P
ATOM 3 OP1 A A1016 60.753 90.259 114.698 1.00 37.50 O
ATOM 4 OP2 A A1016 62.655 91.196 113.256 1.00 36.95 O
ATOM 5 O5' A A1016 60.910 92.698 114.207 1.00 35.13 O
ATOM 6 C5' A A1016 59.919 93.098 115.167 1.00 35.87 C
ATOM 7 C4' A A1016 59.661 94.582 115.070 1.00 35.32 C
ATOM 8 O4' A A1016 60.934 95.267 115.074 1.00 35.97 O
ATOM 9 C3' A A1016 58.944 95.069 113.819 1.00 34.65 C
ATOM 10 O3' A A1016 57.535 95.024 114.068 1.00 36.48 O
ATOM 11 C2' A A1016 59.443 96.503 113.701 1.00 34.25 C
ATOM 12 O2' A A1016 58.795 97.355 114.623 1.00 33.19 O
ATOM 13 C1' A A1016 60.889 96.365 114.185 1.00 34.84 C
ATOM 14 N9 A A1016 61.916 96.151 113.162 1.00 33.75 N
ATOM 15 C8 A A1016 62.417 94.952 112.706 1.00 32.68 C
ATOM 16 N7 A A1016 63.374 95.080 111.824 1.00 30.86 N
ATOM 17 C5 A A1016 63.509 96.455 111.678 1.00 30.75 C
ATOM 18 C6 A A1016 64.370 97.245 110.891 1.00 29.09 C
ATOM 19 N6 A A1016 65.292 96.744 110.069 1.00 26.59 N
ATOM 20 N1 A A1016 64.248 98.584 110.982 1.00 28.73 N
ATOM 21 C2 A A1016 63.322 99.087 111.809 1.00 30.56 C
ATOM 22 N3 A A1016 62.458 98.452 112.599 1.00 29.27 N
ATOM 23 C4 A A1016 62.607 97.125 112.487 1.00 31.02 C
ATOM 24 P A A1017 56.498 94.777 112.864 1.00 38.35 P
ATOM 25 OP1 A A1017 55.145 94.649 113.462 1.00 34.92 O
ATOM 26 OP2 A A1017 57.015 93.690 111.996 1.00 36.72 O
ATOM 27 O5' A A1017 56.539 96.145 112.051 1.00 38.26 O
TER
ATOM 1 O3' G B1013 66.547 86.630 108.252 1.00 37.68 O
ATOM 2 P G B1014 66.742 86.884 109.823 1.00 36.85 P
ATOM 3 OP1 G B1014 68.181 86.725 110.129 1.00 39.11 O
ATOM 4 OP2 G B1014 65.747 86.046 110.532 1.00 39.07 O
ATOM 5 O5' G B1014 66.321 88.405 110.037 1.00 36.42 O
ATOM 6 C5' G B1014 67.159 89.486 109.586 1.00 34.46 C
ATOM 7 C4' G B1014 66.428 90.802 109.723 1.00 34.61 C
ATOM 8 O4' G B1014 65.225 90.772 108.907 1.00 35.33 O
ATOM 9 C3' G B1014 65.901 91.131 111.111 1.00 33.94 C
ATOM 10 O3' G B1014 66.898 91.671 111.960 1.00 35.15 O
ATOM 11 C2' G B1014 64.809 92.138 110.798 1.00 33.65 C
ATOM 12 O2' G B1014 65.333 93.414 110.499 1.00 34.38 O
ATOM 13 C1' G B1014 64.193 91.515 109.546 1.00 33.90 C
ATOM 14 N9 G B1014 63.125 90.590 109.913 1.00 34.15 N
ATOM 15 C8 G B1014 63.209 89.222 109.997 1.00 34.27 C
ATOM 16 N7 G B1014 62.112 88.670 110.431 1.00 34.73 N
ATOM 17 C5 G B1014 61.246 89.735 110.630 1.00 33.48 C
ATOM 18 C6 G B1014 59.918 89.755 111.112 1.00 33.46 C
ATOM 19 O6 G B1014 59.218 88.805 111.491 1.00 34.46 O
ATOM 20 N1 G B1014 59.409 91.047 111.144 1.00 33.34 N
ATOM 21 C2 G B1014 60.092 92.173 110.773 1.00 33.83 C
ATOM 22 N2 G B1014 59.425 93.330 110.870 1.00 33.51 N
ATOM 23 N3 G B1014 61.338 92.168 110.338 1.00 34.59 N
ATOM 24 C4 G B1014 61.849 90.924 110.292 1.00 33.53 C
ATOM 25 P U B1015 67.174 90.994 113.389 1.00 35.74 P
ATOM 26 OP1 U B1015 68.567 91.306 113.784 1.00 35.81 O
ATOM 27 OP2 U B1015 66.740 89.580 113.315 1.00 34.58 O
ATOM 28 O5' U B1015 66.190 91.750 114.384 1.00 35.20 O
TER
Atoms:
OP1: (60.753,90.259,114.698)
OP2: (62.655,91.196,113.256)
C3': (58.944,95.069,113.819)
C1': (60.889,96.365,114.185)
C5': (59.919,93.098,115.167)
O4': (60.934,95.267,115.074)
C8: (62.417,94.952,112.706)
O2': (58.795,97.355,114.623)
C6: (64.370,97.245,110.891)
C5: (63.509,96.455,111.678)
C4: (62.607,97.125,112.487)
P: (61.724,91.342,114.396)
C4': (59.661,94.582,115.070)
C2': (59.443,96.503,113.701)
C2: (63.322,99.087,111.809)
N1: (64.248,98.584,110.982)
N3: (62.458,98.452,112.599)
N6: (65.292,96.744,110.069)
N7: (63.374,95.080,111.824)
N9: (61.916,96.151,113.162)
O5': (60.910,92.698,114.207)
O3': (57.535,95.024,114.068)
OP2: (62.655,91.196,113.256)
C3': (58.944,95.069,113.819)
C1': (60.889,96.365,114.185)
C5': (59.919,93.098,115.167)
O4': (60.934,95.267,115.074)
C8: (62.417,94.952,112.706)
O2': (58.795,97.355,114.623)
C6: (64.370,97.245,110.891)
C5: (63.509,96.455,111.678)
C4: (62.607,97.125,112.487)
P: (61.724,91.342,114.396)
C4': (59.661,94.582,115.070)
C2': (59.443,96.503,113.701)
C2: (63.322,99.087,111.809)
N1: (64.248,98.584,110.982)
N3: (62.458,98.452,112.599)
N6: (65.292,96.744,110.069)
N7: (63.374,95.080,111.824)
N9: (61.916,96.151,113.162)
O5': (60.910,92.698,114.207)
O3': (57.535,95.024,114.068)
OP1: (68.181,86.725,110.129)
OP2: (65.747,86.046,110.532)
C3': (65.901,91.131,111.111)
C1': (64.193,91.515,109.546)
C5': (67.159,89.486,109.586)
O6: (59.218,88.805,111.491)
O4': (65.225,90.772,108.907)
C8: (63.209,89.222,109.997)
C2: (60.092,92.173,110.773)
C6: (59.918,89.755,111.112)
C5: (61.246,89.735,110.630)
C4: (61.849,90.924,110.292)
P: (66.742,86.884,109.823)
C4': (66.428,90.802,109.723)
C2': (64.809,92.138,110.798)
O2': (65.333,93.414,110.499)
N1: (59.409,91.047,111.144)
N2: (59.425,93.330,110.870)
N3: (61.338,92.168,110.338)
N7: (62.112,88.670,110.431)
N9: (63.125,90.590,109.913)
O5': (66.321,88.405,110.037)
O3': (66.898,91.671,111.960)
OP2: (65.747,86.046,110.532)
C3': (65.901,91.131,111.111)
C1': (64.193,91.515,109.546)
C5': (67.159,89.486,109.586)
O6: (59.218,88.805,111.491)
O4': (65.225,90.772,108.907)
C8: (63.209,89.222,109.997)
C2: (60.092,92.173,110.773)
C6: (59.918,89.755,111.112)
C5: (61.246,89.735,110.630)
C4: (61.849,90.924,110.292)
P: (66.742,86.884,109.823)
C4': (66.428,90.802,109.723)
C2': (64.809,92.138,110.798)
O2': (65.333,93.414,110.499)
N1: (59.409,91.047,111.144)
N2: (59.425,93.330,110.870)
N3: (61.338,92.168,110.338)
N7: (62.112,88.670,110.431)
N9: (63.125,90.590,109.913)
O5': (66.321,88.405,110.037)
O3': (66.898,91.671,111.960)
Image (generated by PyMOL):