Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0304:0302
Extra
PDB:
ATOM 1 O3' G A 303 8.138 151.478 48.284 1.00 60.90 O
ATOM 2 P A A 304 7.029 150.552 47.588 1.00 61.13 P
ATOM 3 OP1 A A 304 6.052 151.463 46.949 1.00 62.69 O
ATOM 4 OP2 A A 304 6.555 149.546 48.574 1.00 62.00 O
ATOM 5 O5' A A 304 7.834 149.821 46.432 1.00 59.34 O
ATOM 6 C5' A A 304 8.634 150.589 45.530 1.00 57.83 C
ATOM 7 C4' A A 304 9.975 149.938 45.345 1.00 55.66 C
ATOM 8 O4' A A 304 10.612 149.763 46.634 1.00 54.79 O
ATOM 9 C3' A A 304 9.907 148.543 44.766 1.00 54.37 C
ATOM 10 O3' A A 304 9.793 148.648 43.345 1.00 53.95 O
ATOM 11 C2' A A 304 11.225 147.932 45.239 1.00 54.19 C
ATOM 12 O2' A A 304 12.323 148.313 44.439 1.00 53.60 O
ATOM 13 C1' A A 304 11.397 148.586 46.615 1.00 53.63 C
ATOM 14 N9 A A 304 11.037 147.766 47.774 1.00 53.14 N
ATOM 15 C8 A A 304 9.881 147.813 48.515 1.00 53.16 C
ATOM 16 N7 A A 304 9.854 146.956 49.507 1.00 52.67 N
ATOM 17 C5 A A 304 11.073 146.299 49.414 1.00 52.41 C
ATOM 18 C6 A A 304 11.655 145.268 50.173 1.00 51.53 C
ATOM 19 N6 A A 304 11.061 144.692 51.219 1.00 52.29 N
ATOM 20 N1 A A 304 12.884 144.839 49.816 1.00 50.71 N
ATOM 21 C2 A A 304 13.476 145.408 48.767 1.00 50.11 C
ATOM 22 N3 A A 304 13.034 146.380 47.974 1.00 51.11 N
ATOM 23 C4 A A 304 11.812 146.787 48.353 1.00 52.38 C
ATOM 24 P A A 305 8.508 148.038 42.592 1.00 53.15 P
ATOM 25 OP1 A A 305 8.539 148.441 41.167 1.00 52.85 O
ATOM 26 OP2 A A 305 7.305 148.336 43.411 1.00 52.39 O
ATOM 27 O5' A A 305 8.777 146.477 42.613 1.00 51.62 O
TER
ATOM 1 O3' U B 301 1.057 145.228 52.776 1.00 60.06 O
ATOM 2 P G B 302 1.468 146.775 52.837 1.00 58.75 P
ATOM 3 OP1 G B 302 1.407 147.233 54.240 1.00 58.79 O
ATOM 4 OP2 G B 302 0.688 147.491 51.801 1.00 59.07 O
ATOM 5 O5' G B 302 2.997 146.768 52.400 1.00 59.37 O
ATOM 6 C5' G B 302 3.975 146.065 53.184 1.00 58.97 C
ATOM 7 C4' G B 302 5.315 146.041 52.484 1.00 58.15 C
ATOM 8 O4' G B 302 5.242 145.234 51.279 1.00 59.79 O
ATOM 9 C3' G B 302 5.847 147.370 51.987 1.00 56.98 C
ATOM 10 O3' G B 302 6.435 148.134 53.021 1.00 55.65 O
ATOM 11 C2' G B 302 6.875 146.917 50.967 1.00 58.69 C
ATOM 12 O2' G B 302 8.047 146.421 51.576 1.00 59.56 O
ATOM 13 C1' G B 302 6.130 145.760 50.304 1.00 59.35 C
ATOM 14 N9 G B 302 5.342 146.244 49.176 1.00 60.19 N
ATOM 15 C8 G B 302 4.053 146.713 49.207 1.00 61.11 C
ATOM 16 N7 G B 302 3.625 147.113 48.044 1.00 62.03 N
ATOM 17 C5 G B 302 4.692 146.888 47.191 1.00 61.96 C
ATOM 18 C6 G B 302 4.814 147.123 45.809 1.00 63.49 C
ATOM 19 O6 G B 302 3.974 147.596 45.035 1.00 66.63 O
ATOM 20 N1 G B 302 6.068 146.745 45.335 1.00 64.06 N
ATOM 21 C2 G B 302 7.073 146.206 46.099 1.00 62.94 C
ATOM 22 N2 G B 302 8.209 145.896 45.456 1.00 62.13 N
ATOM 23 N3 G B 302 6.968 145.984 47.397 1.00 62.31 N
ATOM 24 C4 G B 302 5.758 146.345 47.873 1.00 61.22 C
ATOM 25 P G B 303 6.271 149.727 53.012 1.00 54.94 P
ATOM 26 OP1 G B 303 6.975 150.285 54.189 1.00 55.24 O
ATOM 27 OP2 G B 303 4.837 150.008 52.824 1.00 57.95 O
ATOM 28 O5' G B 303 7.032 150.191 51.695 1.00 54.68 O
TER
ATOM 2 P A A 304 7.029 150.552 47.588 1.00 61.13 P
ATOM 3 OP1 A A 304 6.052 151.463 46.949 1.00 62.69 O
ATOM 4 OP2 A A 304 6.555 149.546 48.574 1.00 62.00 O
ATOM 5 O5' A A 304 7.834 149.821 46.432 1.00 59.34 O
ATOM 6 C5' A A 304 8.634 150.589 45.530 1.00 57.83 C
ATOM 7 C4' A A 304 9.975 149.938 45.345 1.00 55.66 C
ATOM 8 O4' A A 304 10.612 149.763 46.634 1.00 54.79 O
ATOM 9 C3' A A 304 9.907 148.543 44.766 1.00 54.37 C
ATOM 10 O3' A A 304 9.793 148.648 43.345 1.00 53.95 O
ATOM 11 C2' A A 304 11.225 147.932 45.239 1.00 54.19 C
ATOM 12 O2' A A 304 12.323 148.313 44.439 1.00 53.60 O
ATOM 13 C1' A A 304 11.397 148.586 46.615 1.00 53.63 C
ATOM 14 N9 A A 304 11.037 147.766 47.774 1.00 53.14 N
ATOM 15 C8 A A 304 9.881 147.813 48.515 1.00 53.16 C
ATOM 16 N7 A A 304 9.854 146.956 49.507 1.00 52.67 N
ATOM 17 C5 A A 304 11.073 146.299 49.414 1.00 52.41 C
ATOM 18 C6 A A 304 11.655 145.268 50.173 1.00 51.53 C
ATOM 19 N6 A A 304 11.061 144.692 51.219 1.00 52.29 N
ATOM 20 N1 A A 304 12.884 144.839 49.816 1.00 50.71 N
ATOM 21 C2 A A 304 13.476 145.408 48.767 1.00 50.11 C
ATOM 22 N3 A A 304 13.034 146.380 47.974 1.00 51.11 N
ATOM 23 C4 A A 304 11.812 146.787 48.353 1.00 52.38 C
ATOM 24 P A A 305 8.508 148.038 42.592 1.00 53.15 P
ATOM 25 OP1 A A 305 8.539 148.441 41.167 1.00 52.85 O
ATOM 26 OP2 A A 305 7.305 148.336 43.411 1.00 52.39 O
ATOM 27 O5' A A 305 8.777 146.477 42.613 1.00 51.62 O
TER
ATOM 1 O3' U B 301 1.057 145.228 52.776 1.00 60.06 O
ATOM 2 P G B 302 1.468 146.775 52.837 1.00 58.75 P
ATOM 3 OP1 G B 302 1.407 147.233 54.240 1.00 58.79 O
ATOM 4 OP2 G B 302 0.688 147.491 51.801 1.00 59.07 O
ATOM 5 O5' G B 302 2.997 146.768 52.400 1.00 59.37 O
ATOM 6 C5' G B 302 3.975 146.065 53.184 1.00 58.97 C
ATOM 7 C4' G B 302 5.315 146.041 52.484 1.00 58.15 C
ATOM 8 O4' G B 302 5.242 145.234 51.279 1.00 59.79 O
ATOM 9 C3' G B 302 5.847 147.370 51.987 1.00 56.98 C
ATOM 10 O3' G B 302 6.435 148.134 53.021 1.00 55.65 O
ATOM 11 C2' G B 302 6.875 146.917 50.967 1.00 58.69 C
ATOM 12 O2' G B 302 8.047 146.421 51.576 1.00 59.56 O
ATOM 13 C1' G B 302 6.130 145.760 50.304 1.00 59.35 C
ATOM 14 N9 G B 302 5.342 146.244 49.176 1.00 60.19 N
ATOM 15 C8 G B 302 4.053 146.713 49.207 1.00 61.11 C
ATOM 16 N7 G B 302 3.625 147.113 48.044 1.00 62.03 N
ATOM 17 C5 G B 302 4.692 146.888 47.191 1.00 61.96 C
ATOM 18 C6 G B 302 4.814 147.123 45.809 1.00 63.49 C
ATOM 19 O6 G B 302 3.974 147.596 45.035 1.00 66.63 O
ATOM 20 N1 G B 302 6.068 146.745 45.335 1.00 64.06 N
ATOM 21 C2 G B 302 7.073 146.206 46.099 1.00 62.94 C
ATOM 22 N2 G B 302 8.209 145.896 45.456 1.00 62.13 N
ATOM 23 N3 G B 302 6.968 145.984 47.397 1.00 62.31 N
ATOM 24 C4 G B 302 5.758 146.345 47.873 1.00 61.22 C
ATOM 25 P G B 303 6.271 149.727 53.012 1.00 54.94 P
ATOM 26 OP1 G B 303 6.975 150.285 54.189 1.00 55.24 O
ATOM 27 OP2 G B 303 4.837 150.008 52.824 1.00 57.95 O
ATOM 28 O5' G B 303 7.032 150.191 51.695 1.00 54.68 O
TER
Atoms:
OP1: (6.052,151.463,46.949)
OP2: (6.555,149.546,48.574)
C3': (9.907,148.543,44.766)
C1': (11.397,148.586,46.615)
C5': (8.634,150.589,45.530)
O4': (10.612,149.763,46.634)
C8: (9.881,147.813,48.515)
O2': (12.323,148.313,44.439)
C6: (11.655,145.268,50.173)
C5: (11.073,146.299,49.414)
C4: (11.812,146.787,48.353)
P: (7.029,150.552,47.588)
C4': (9.975,149.938,45.345)
C2': (11.225,147.932,45.239)
C2: (13.476,145.408,48.767)
N1: (12.884,144.839,49.816)
N3: (13.034,146.380,47.974)
N6: (11.061,144.692,51.219)
N7: (9.854,146.956,49.507)
N9: (11.037,147.766,47.774)
O5': (7.834,149.821,46.432)
O3': (9.793,148.648,43.345)
OP2: (6.555,149.546,48.574)
C3': (9.907,148.543,44.766)
C1': (11.397,148.586,46.615)
C5': (8.634,150.589,45.530)
O4': (10.612,149.763,46.634)
C8: (9.881,147.813,48.515)
O2': (12.323,148.313,44.439)
C6: (11.655,145.268,50.173)
C5: (11.073,146.299,49.414)
C4: (11.812,146.787,48.353)
P: (7.029,150.552,47.588)
C4': (9.975,149.938,45.345)
C2': (11.225,147.932,45.239)
C2: (13.476,145.408,48.767)
N1: (12.884,144.839,49.816)
N3: (13.034,146.380,47.974)
N6: (11.061,144.692,51.219)
N7: (9.854,146.956,49.507)
N9: (11.037,147.766,47.774)
O5': (7.834,149.821,46.432)
O3': (9.793,148.648,43.345)
OP1: (1.407,147.233,54.240)
OP2: (0.688,147.491,51.801)
C3': (5.847,147.370,51.987)
C1': (6.130,145.760,50.304)
C5': (3.975,146.065,53.184)
O6: (3.974,147.596,45.035)
O4': (5.242,145.234,51.279)
C8: (4.053,146.713,49.207)
C2: (7.073,146.206,46.099)
C6: (4.814,147.123,45.809)
C5: (4.692,146.888,47.191)
C4: (5.758,146.345,47.873)
P: (1.468,146.775,52.837)
C4': (5.315,146.041,52.484)
C2': (6.875,146.917,50.967)
O2': (8.047,146.421,51.576)
N1: (6.068,146.745,45.335)
N2: (8.209,145.896,45.456)
N3: (6.968,145.984,47.397)
N7: (3.625,147.113,48.044)
N9: (5.342,146.244,49.176)
O5': (2.997,146.768,52.400)
O3': (6.435,148.134,53.021)
OP2: (0.688,147.491,51.801)
C3': (5.847,147.370,51.987)
C1': (6.130,145.760,50.304)
C5': (3.975,146.065,53.184)
O6: (3.974,147.596,45.035)
O4': (5.242,145.234,51.279)
C8: (4.053,146.713,49.207)
C2: (7.073,146.206,46.099)
C6: (4.814,147.123,45.809)
C5: (4.692,146.888,47.191)
C4: (5.758,146.345,47.873)
P: (1.468,146.775,52.837)
C4': (5.315,146.041,52.484)
C2': (6.875,146.917,50.967)
O2': (8.047,146.421,51.576)
N1: (6.068,146.745,45.335)
N2: (8.209,145.896,45.456)
N3: (6.968,145.984,47.397)
N7: (3.625,147.113,48.044)
N9: (5.342,146.244,49.176)
O5': (2.997,146.768,52.400)
O3': (6.435,148.134,53.021)
Image (generated by PyMOL):