ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EZ6:D13:D11

Extra

PDB:
ATOM 1 O3' C A 12 -36.570 -10.552 6.817 1.00 42.73 O
ATOM 2 P A A 13 -36.414 -10.014 5.306 1.00 48.97 P
ATOM 3 OP1 A A 13 -37.628 -10.404 4.543 1.00 47.41 O
ATOM 4 OP2 A A 13 -35.074 -10.446 4.827 1.00 48.30 O
ATOM 5 O5' A A 13 -36.402 -8.425 5.443 1.00 50.28 O
ATOM 6 C5' A A 13 -37.543 -7.723 5.927 1.00 50.18 C
ATOM 7 C4' A A 13 -37.132 -6.381 6.481 1.00 53.75 C
ATOM 8 O4' A A 13 -36.111 -6.596 7.485 1.00 52.67 O
ATOM 9 C3' A A 13 -36.496 -5.415 5.492 1.00 54.39 C
ATOM 10 O3' A A 13 -37.501 -4.657 4.828 1.00 58.93 O
ATOM 11 C2' A A 13 -35.653 -4.529 6.401 1.00 57.75 C
ATOM 12 O2' A A 13 -36.404 -3.511 7.033 1.00 53.98 O
ATOM 13 C1' A A 13 -35.169 -5.540 7.443 1.00 50.14 C
ATOM 14 N9 A A 13 -33.863 -6.120 7.140 1.00 52.24 N
ATOM 15 C8 A A 13 -33.603 -7.339 6.562 1.00 46.11 C
ATOM 16 N7 A A 13 -32.326 -7.597 6.429 1.00 53.08 N
ATOM 17 C5 A A 13 -31.701 -6.473 6.951 1.00 51.45 C
ATOM 18 C6 A A 13 -30.348 -6.126 7.098 1.00 51.64 C
ATOM 19 N6 A A 13 -29.339 -6.912 6.720 1.00 52.47 N
ATOM 20 N1 A A 13 -30.063 -4.928 7.653 1.00 52.38 N
ATOM 21 C2 A A 13 -31.076 -4.141 8.031 1.00 48.28 C
ATOM 22 N3 A A 13 -32.388 -4.356 7.946 1.00 51.50 N
ATOM 23 C4 A A 13 -32.636 -5.553 7.390 1.00 52.37 C
ATOM 24 P A A 14 -37.267 -4.164 3.313 1.00 65.02 P
ATOM 25 OP1 A A 14 -38.519 -3.484 2.893 1.00 69.32 O
ATOM 26 OP2 A A 14 -36.738 -5.288 2.501 1.00 57.87 O
ATOM 27 O5' A A 14 -36.133 -3.054 3.437 1.00 63.35 O
TER

ATOM 1 O3' C B 10 -28.058 -15.441 2.548 1.00 43.20 O
ATOM 2 P G B 11 -29.144 -15.613 3.719 1.00 46.05 P
ATOM 3 OP1 G B 11 -28.453 -16.208 4.890 1.00 52.03 O
ATOM 4 OP2 G B 11 -30.350 -16.275 3.148 1.00 42.13 O
ATOM 5 O5' G B 11 -29.575 -14.122 4.087 1.00 42.94 O
ATOM 6 C5' G B 11 -28.703 -13.269 4.807 1.00 45.67 C
ATOM 7 C4' G B 11 -29.342 -11.917 5.008 1.00 47.17 C
ATOM 8 O4' G B 11 -29.559 -11.289 3.716 1.00 48.24 O
ATOM 9 C3' G B 11 -30.731 -11.894 5.631 1.00 48.73 C
ATOM 10 O3' G B 11 -30.697 -12.029 7.051 1.00 51.36 O
ATOM 11 C2' G B 11 -31.211 -10.505 5.232 1.00 41.09 C
ATOM 12 O2' G B 11 -30.676 -9.481 6.042 1.00 40.80 O
ATOM 13 C1' G B 11 -30.657 -10.394 3.811 1.00 44.91 C
ATOM 14 N9 G B 11 -31.697 -10.810 2.884 1.00 43.18 N
ATOM 15 C8 G B 11 -31.862 -12.036 2.294 1.00 41.12 C
ATOM 16 N7 G B 11 -32.976 -12.130 1.621 1.00 42.31 N
ATOM 17 C5 G B 11 -33.565 -10.881 1.756 1.00 44.10 C
ATOM 18 C6 G B 11 -34.801 -10.392 1.273 1.00 51.13 C
ATOM 19 O6 G B 11 -35.669 -11.001 0.641 1.00 50.57 O
ATOM 20 N1 G B 11 -34.991 -9.051 1.613 1.00 44.63 N
ATOM 21 C2 G B 11 -34.107 -8.288 2.340 1.00 52.71 C
ATOM 22 N2 G B 11 -34.440 -7.002 2.537 1.00 49.97 N
ATOM 23 N3 G B 11 -32.971 -8.748 2.829 1.00 50.08 N
ATOM 24 C4 G B 11 -32.765 -10.044 2.497 1.00 49.16 C
ATOM 25 P C B 12 -31.802 -12.937 7.790 1.00 52.34 P
ATOM 26 OP1 C B 12 -31.655 -12.741 9.254 1.00 57.18 O
ATOM 27 OP2 C B 12 -31.706 -14.305 7.223 1.00 42.25 O
ATOM 28 O5' C B 12 -33.188 -12.281 7.357 1.00 53.49 O
TER

Atoms:
OP1: (-37.628,-10.404,4.543)
OP2: (-35.074,-10.446,4.827)
C3': (-36.496,-5.415,5.492)
C1': (-35.169,-5.540,7.443)
C5': (-37.543,-7.723,5.927)
O4': (-36.111,-6.596,7.485)
C8: (-33.603,-7.339,6.562)
O2': (-36.404,-3.511,7.033)
C6: (-30.348,-6.126,7.098)
C5: (-31.701,-6.473,6.951)
C4: (-32.636,-5.553,7.390)
P: (-36.414,-10.014,5.306)
C4': (-37.132,-6.381,6.481)
C2': (-35.653,-4.529,6.401)
C2: (-31.076,-4.141,8.031)
N1: (-30.063,-4.928,7.653)
N3: (-32.388,-4.356,7.946)
N6: (-29.339,-6.912,6.720)
N7: (-32.326,-7.597,6.429)
N9: (-33.863,-6.120,7.140)
O5': (-36.402,-8.425,5.443)
O3': (-37.501,-4.657,4.828)
OP1: (-28.453,-16.208,4.890)
OP2: (-30.350,-16.275,3.148)
C3': (-30.731,-11.894,5.631)
C1': (-30.657,-10.394,3.811)
C5': (-28.703,-13.269,4.807)
O6: (-35.669,-11.001,0.641)
O4': (-29.559,-11.289,3.716)
C8: (-31.862,-12.036,2.294)
C2: (-34.107,-8.288,2.340)
C6: (-34.801,-10.392,1.273)
C5: (-33.565,-10.881,1.756)
C4: (-32.765,-10.044,2.497)
P: (-29.144,-15.613,3.719)
C4': (-29.342,-11.917,5.008)
C2': (-31.211,-10.505,5.232)
O2': (-30.676,-9.481,6.042)
N1: (-34.991,-9.051,1.613)
N2: (-34.440,-7.002,2.537)
N3: (-32.971,-8.748,2.829)
N7: (-32.976,-12.130,1.621)
N9: (-31.697,-10.810,2.884)
O5': (-29.575,-14.122,4.087)
O3': (-30.697,-12.029,7.051)
Image (generated by PyMOL):
PyMOL image
show in jmol