ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2A43:A21:A3

Extra

PDB:
ATOM 1 O3' A A 20 -7.510 46.862 11.272 1.00 18.93 O
ATOM 2 P A A 21 -7.397 48.215 12.123 1.00 19.64 P
ATOM 3 OP1 A A 21 -7.625 49.280 11.140 1.00 23.77 O
ATOM 4 OP2 A A 21 -6.174 48.205 12.960 1.00 20.07 O
ATOM 5 O5' A A 21 -8.562 48.105 13.199 1.00 20.28 O
ATOM 6 C5' A A 21 -9.894 48.096 12.766 1.00 21.08 C
ATOM 7 C4' A A 21 -10.814 47.843 13.930 1.00 20.57 C
ATOM 8 O4' A A 21 -10.487 46.519 14.441 1.00 19.13 O
ATOM 9 C3' A A 21 -10.685 48.718 15.154 1.00 20.90 C
ATOM 10 O3' A A 21 -11.558 49.825 14.937 1.00 26.37 O
ATOM 11 C2' A A 21 -11.262 47.801 16.230 1.00 19.23 C
ATOM 12 O2' A A 21 -12.647 47.599 16.136 1.00 24.52 O
ATOM 13 C1' A A 21 -10.632 46.476 15.859 1.00 18.90 C
ATOM 14 N9 A A 21 -9.319 46.252 16.415 1.00 18.11 N
ATOM 15 C8 A A 21 -8.069 46.416 15.822 1.00 18.24 C
ATOM 16 N7 A A 21 -7.118 46.089 16.684 1.00 16.84 N
ATOM 17 C5 A A 21 -7.761 45.664 17.837 1.00 14.69 C
ATOM 18 C6 A A 21 -7.287 45.224 19.103 1.00 15.76 C
ATOM 19 N6 A A 21 -6.004 45.076 19.390 1.00 17.19 N
ATOM 20 N1 A A 21 -8.198 44.905 20.030 1.00 15.75 N
ATOM 21 C2 A A 21 -9.485 45.049 19.727 1.00 17.47 C
ATOM 22 N3 A A 21 -10.076 45.478 18.607 1.00 16.69 N
ATOM 23 C4 A A 21 -9.121 45.784 17.695 1.00 16.49 C
ATOM 24 P A A 22 -10.938 51.231 15.360 1.00 31.68 P
ATOM 25 OP1 A A 22 -12.028 52.230 15.259 1.00 46.11 O
ATOM 26 OP2 A A 22 -9.706 51.441 14.577 1.00 45.01 O
ATOM 27 O5' A A 22 -10.604 51.044 16.872 1.00 41.85 O
TER

ATOM 1 O3' G B 2 2.440 40.605 19.623 1.00 17.94 O
ATOM 2 P G B 3 2.374 42.106 20.153 1.00 20.05 P
ATOM 3 OP1 G B 3 3.302 42.892 19.308 1.00 21.66 O
ATOM 4 OP2 G B 3 2.489 42.107 21.635 1.00 24.02 O
ATOM 5 O5' G B 3 0.909 42.617 19.830 1.00 17.87 O
ATOM 6 C5' G B 3 0.484 42.779 18.469 1.00 18.54 C
ATOM 7 C4' G B 3 -0.906 43.336 18.481 1.00 17.76 C
ATOM 8 O4' G B 3 -1.837 42.433 19.116 1.00 16.03 O
ATOM 9 C3' G B 3 -1.054 44.612 19.286 1.00 17.82 C
ATOM 10 O3' G B 3 -0.519 45.711 18.537 1.00 20.39 O
ATOM 11 C2' G B 3 -2.565 44.700 19.457 1.00 16.82 C
ATOM 12 O2' G B 3 -3.237 45.063 18.261 1.00 19.86 O
ATOM 13 C1' G B 3 -2.816 43.227 19.784 1.00 15.24 C
ATOM 14 N9 G B 3 -2.813 42.910 21.197 1.00 13.99 N
ATOM 15 C8 G B 3 -1.761 42.435 21.956 1.00 15.43 C
ATOM 16 N7 G B 3 -2.023 42.270 23.203 1.00 14.02 N
ATOM 17 C5 G B 3 -3.347 42.623 23.279 1.00 12.65 C
ATOM 18 C6 G B 3 -4.201 42.587 24.397 1.00 13.41 C
ATOM 19 O6 G B 3 -3.972 42.361 25.575 1.00 14.19 O
ATOM 20 N1 G B 3 -5.463 43.095 24.075 1.00 13.11 N
ATOM 21 C2 G B 3 -5.875 43.488 22.848 1.00 13.05 C
ATOM 22 N2 G B 3 -7.120 43.934 22.688 1.00 14.32 N
ATOM 23 N3 G B 3 -5.078 43.503 21.775 1.00 13.37 N
ATOM 24 C4 G B 3 -3.856 43.060 22.085 1.00 13.51 C
ATOM 25 P C B 4 -0.036 47.008 19.338 1.00 21.26 P
ATOM 26 OP1 C B 4 0.426 47.924 18.250 1.00 29.24 O
ATOM 27 OP2 C B 4 0.789 46.676 20.508 1.00 23.14 O
ATOM 28 O5' C B 4 -1.449 47.472 19.894 1.00 20.73 O
TER

Atoms:
OP1: (-7.625,49.280,11.140)
OP2: (-6.174,48.205,12.960)
C3': (-10.685,48.718,15.154)
C1': (-10.632,46.476,15.859)
C5': (-9.894,48.096,12.766)
O4': (-10.487,46.519,14.441)
C8: (-8.069,46.416,15.822)
O2': (-12.647,47.599,16.136)
C6: (-7.287,45.224,19.103)
C5: (-7.761,45.664,17.837)
C4: (-9.121,45.784,17.695)
P: (-7.397,48.215,12.123)
C4': (-10.814,47.843,13.930)
C2': (-11.262,47.801,16.230)
C2: (-9.485,45.049,19.727)
N1: (-8.198,44.905,20.030)
N3: (-10.076,45.478,18.607)
N6: (-6.004,45.076,19.390)
N7: (-7.118,46.089,16.684)
N9: (-9.319,46.252,16.415)
O5': (-8.562,48.105,13.199)
O3': (-11.558,49.825,14.937)
OP1: (3.302,42.892,19.308)
OP2: (2.489,42.107,21.635)
C3': (-1.054,44.612,19.286)
C1': (-2.816,43.227,19.784)
C5': (0.484,42.779,18.469)
O6: (-3.972,42.361,25.575)
O4': (-1.837,42.433,19.116)
C8: (-1.761,42.435,21.956)
C2: (-5.875,43.488,22.848)
C6: (-4.201,42.587,24.397)
C5: (-3.347,42.623,23.279)
C4: (-3.856,43.060,22.085)
P: (2.374,42.106,20.153)
C4': (-0.906,43.336,18.481)
C2': (-2.565,44.700,19.457)
O2': (-3.237,45.063,18.261)
N1: (-5.463,43.095,24.075)
N2: (-7.120,43.934,22.688)
N3: (-5.078,43.503,21.775)
N7: (-2.023,42.270,23.203)
N9: (-2.813,42.910,21.197)
O5': (0.909,42.617,19.830)
O3': (-0.519,45.711,18.537)
Image (generated by PyMOL):
PyMOL image
show in jmol