ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A664:A2333

Extra

PDB:
ATOM 1 O3' A A 663 -129.681 -50.474 79.707 1.00106.70 O
ATOM 2 P A A 664 -129.161 -51.917 79.292 1.00121.39 P
ATOM 3 OP1 A A 664 -128.642 -52.589 80.503 1.00 99.36 O
ATOM 4 OP2 A A 664 -128.291 -51.742 78.105 1.00112.38 O
ATOM 5 O5' A A 664 -130.524 -52.632 78.850 1.00102.13 O
ATOM 6 C5' A A 664 -131.463 -52.984 79.854 1.00 96.32 C
ATOM 7 C4' A A 664 -132.601 -53.755 79.235 1.00 96.44 C
ATOM 8 O4' A A 664 -133.098 -52.971 78.135 1.00 93.79 O
ATOM 9 C3' A A 664 -132.181 -55.078 78.614 1.00106.17 C
ATOM 10 O3' A A 664 -132.225 -56.123 79.611 1.00132.77 O
ATOM 11 C2' A A 664 -133.177 -55.262 77.458 1.00102.89 C
ATOM 12 O2' A A 664 -134.325 -56.045 77.763 1.00103.76 O
ATOM 13 C1' A A 664 -133.599 -53.830 77.133 1.00101.31 C
ATOM 14 N9 A A 664 -133.061 -53.327 75.884 1.00 95.94 N
ATOM 15 C8 A A 664 -131.830 -52.777 75.722 1.00 99.46 C
ATOM 16 N7 A A 664 -131.592 -52.396 74.493 1.00106.61 N
ATOM 17 C5 A A 664 -132.749 -52.713 73.805 1.00 94.85 C
ATOM 18 C6 A A 664 -133.125 -52.553 72.454 1.00 94.15 C
ATOM 19 N6 A A 664 -132.323 -52.006 71.533 1.00 97.92 N
ATOM 20 N1 A A 664 -134.355 -52.971 72.086 1.00 96.49 N
ATOM 21 C2 A A 664 -135.146 -53.512 73.018 1.00105.72 C
ATOM 22 N3 A A 664 -134.900 -53.712 74.315 1.00108.57 N
ATOM 23 C4 A A 664 -133.669 -53.292 74.650 1.00 97.30 C
ATOM 24 P C A 665 -130.885 -56.894 80.048 1.00214.24 P
ATOM 25 OP1 C A 665 -130.641 -56.612 81.479 1.00189.52 O
ATOM 26 OP2 C A 665 -129.831 -56.613 79.049 1.00171.94 O
ATOM 27 O5' C A 665 -131.295 -58.430 79.913 1.00167.47 O
TER

ATOM 1 O3' U B2332 -129.029 -44.628 67.243 1.00 83.15 O
ATOM 2 P G B2333 -128.266 -45.872 66.567 1.00 97.77 P
ATOM 3 OP1 G B2333 -126.815 -45.644 66.756 1.00 81.33 O
ATOM 4 OP2 G B2333 -128.810 -46.028 65.193 1.00 81.83 O
ATOM 5 O5' G B2333 -128.758 -47.144 67.422 1.00 98.93 O
ATOM 6 C5' G B2333 -128.750 -47.120 68.851 1.00 97.05 C
ATOM 7 C4' G B2333 -129.314 -48.388 69.492 1.00 96.16 C
ATOM 8 O4' G B2333 -130.746 -48.297 69.750 1.00 93.36 O
ATOM 9 C3' G B2333 -129.171 -49.677 68.700 1.00 91.25 C
ATOM 10 O3' G B2333 -127.849 -50.190 68.825 1.00 92.68 O
ATOM 11 C2' G B2333 -130.179 -50.546 69.445 1.00 92.25 C
ATOM 12 O2' G B2333 -129.675 -50.951 70.703 1.00 91.55 O
ATOM 13 C1' G B2333 -131.346 -49.575 69.608 1.00 86.84 C
ATOM 14 N9 G B2333 -132.210 -49.570 68.430 1.00 86.56 N
ATOM 15 C8 G B2333 -132.190 -48.660 67.401 1.00 90.68 C
ATOM 16 N7 G B2333 -133.064 -48.901 66.465 1.00 88.26 N
ATOM 17 C5 G B2333 -133.700 -50.052 66.895 1.00 87.93 C
ATOM 18 C6 G B2333 -134.743 -50.784 66.286 1.00 94.97 C
ATOM 19 O6 G B2333 -135.322 -50.553 65.218 1.00 95.76 O
ATOM 20 N1 G B2333 -135.106 -51.891 67.044 1.00100.05 N
ATOM 21 C2 G B2333 -134.533 -52.237 68.244 1.00100.34 C
ATOM 22 N2 G B2333 -135.018 -53.342 68.835 1.00 92.27 N
ATOM 23 N3 G B2333 -133.553 -51.553 68.826 1.00 96.85 N
ATOM 24 C4 G B2333 -133.188 -50.477 68.098 1.00 87.71 C
ATOM 25 P C B2334 -127.371 -51.380 67.864 1.00 85.32 P
ATOM 26 OP1 C B2334 -127.413 -52.632 68.649 1.00 84.23 O
ATOM 27 OP2 C B2334 -126.119 -50.988 67.178 1.00 82.58 O
ATOM 28 O5' C B2334 -128.542 -51.341 66.773 1.00 91.16 O
TER

Atoms:
OP1: (-128.642,-52.589,80.503)
OP2: (-128.291,-51.742,78.105)
C3': (-132.181,-55.078,78.614)
C1': (-133.599,-53.830,77.133)
C5': (-131.463,-52.984,79.854)
O4': (-133.098,-52.971,78.135)
C8: (-131.830,-52.777,75.722)
O2': (-134.325,-56.045,77.763)
C6: (-133.125,-52.553,72.454)
C5: (-132.749,-52.713,73.805)
C4: (-133.669,-53.292,74.650)
P: (-129.161,-51.917,79.292)
C4': (-132.601,-53.755,79.235)
C2': (-133.177,-55.262,77.458)
C2: (-135.146,-53.512,73.018)
N1: (-134.355,-52.971,72.086)
N3: (-134.900,-53.712,74.315)
N6: (-132.323,-52.006,71.533)
N7: (-131.592,-52.396,74.493)
N9: (-133.061,-53.327,75.884)
O5': (-130.524,-52.632,78.850)
O3': (-132.225,-56.123,79.611)
OP1: (-126.815,-45.644,66.756)
OP2: (-128.810,-46.028,65.193)
C3': (-129.171,-49.677,68.700)
C1': (-131.346,-49.575,69.608)
C5': (-128.750,-47.120,68.851)
O6: (-135.322,-50.553,65.218)
O4': (-130.746,-48.297,69.750)
C8: (-132.190,-48.660,67.401)
C2: (-134.533,-52.237,68.244)
C6: (-134.743,-50.784,66.286)
C5: (-133.700,-50.052,66.895)
C4: (-133.188,-50.477,68.098)
P: (-128.266,-45.872,66.567)
C4': (-129.314,-48.388,69.492)
C2': (-130.179,-50.546,69.445)
O2': (-129.675,-50.951,70.703)
N1: (-135.106,-51.891,67.044)
N2: (-135.018,-53.342,68.835)
N3: (-133.553,-51.553,68.826)
N7: (-133.064,-48.901,66.465)
N9: (-132.210,-49.570,68.430)
O5': (-128.758,-47.144,67.422)
O3': (-127.849,-50.190,68.825)
Image (generated by PyMOL):
PyMOL image
show in jmol