ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01016:01014

Extra

PDB:
ATOM 1 O3' U A1015 62.527 91.508 115.667 1.00 36.81 O
ATOM 2 P A A1016 61.598 91.224 114.388 1.00 36.70 P
ATOM 3 OP1 A A1016 60.654 90.144 114.771 1.00 36.56 O
ATOM 4 OP2 A A1016 62.482 91.038 113.220 1.00 37.30 O
ATOM 5 O5' A A1016 60.764 92.567 114.178 1.00 35.51 O
ATOM 6 C5' A A1016 59.845 93.025 115.189 1.00 36.01 C
ATOM 7 C4' A A1016 59.600 94.507 115.048 1.00 35.36 C
ATOM 8 O4' A A1016 60.879 95.173 114.967 1.00 35.86 O
ATOM 9 C3' A A1016 58.845 94.942 113.804 1.00 35.20 C
ATOM 10 O3' A A1016 57.447 94.941 114.088 1.00 36.07 O
ATOM 11 C2' A A1016 59.350 96.360 113.582 1.00 35.01 C
ATOM 12 O2' A A1016 58.674 97.290 114.399 1.00 33.62 O
ATOM 13 C1' A A1016 60.803 96.249 114.055 1.00 35.11 C
ATOM 14 N9 A A1016 61.813 96.027 113.020 1.00 34.19 N
ATOM 15 C8 A A1016 62.290 94.826 112.554 1.00 33.74 C
ATOM 16 N7 A A1016 63.233 94.945 111.655 1.00 32.75 N
ATOM 17 C5 A A1016 63.380 96.316 111.507 1.00 32.80 C
ATOM 18 C6 A A1016 64.226 97.094 110.697 1.00 32.70 C
ATOM 19 N6 A A1016 65.129 96.580 109.859 1.00 32.22 N
ATOM 20 N1 A A1016 64.113 98.435 110.780 1.00 32.49 N
ATOM 21 C2 A A1016 63.218 98.950 111.631 1.00 34.28 C
ATOM 22 N3 A A1016 62.374 98.325 112.450 1.00 34.58 N
ATOM 23 C4 A A1016 62.506 96.993 112.336 1.00 33.52 C
ATOM 24 P A A1017 56.382 94.766 112.902 1.00 36.19 P
ATOM 25 OP1 A A1017 55.035 94.638 113.517 1.00 34.33 O
ATOM 26 OP2 A A1017 56.884 93.696 112.007 1.00 36.04 O
ATOM 27 O5' A A1017 56.456 96.147 112.112 1.00 36.82 O
TER

ATOM 1 O3' G B1013 66.459 86.506 108.160 1.00 38.63 O
ATOM 2 P G B1014 66.657 86.675 109.742 1.00 39.00 P
ATOM 3 OP1 G B1014 68.102 86.486 110.028 1.00 41.24 O
ATOM 4 OP2 G B1014 65.659 85.802 110.401 1.00 40.23 O
ATOM 5 O5' G B1014 66.254 88.184 110.040 1.00 35.17 O
ATOM 6 C5' G B1014 67.056 89.273 109.568 1.00 32.59 C
ATOM 7 C4' G B1014 66.313 90.575 109.741 1.00 34.58 C
ATOM 8 O4' G B1014 65.106 90.549 108.932 1.00 34.25 O
ATOM 9 C3' G B1014 65.803 90.887 111.142 1.00 35.25 C
ATOM 10 O3' G B1014 66.812 91.431 111.993 1.00 37.77 O
ATOM 11 C2' G B1014 64.690 91.884 110.852 1.00 34.30 C
ATOM 12 O2' G B1014 65.166 93.184 110.586 1.00 34.77 O
ATOM 13 C1' G B1014 64.079 91.285 109.582 1.00 33.83 C
ATOM 14 N9 G B1014 63.003 90.365 109.930 1.00 33.81 N
ATOM 15 C8 G B1014 63.082 88.997 110.029 1.00 33.83 C
ATOM 16 N7 G B1014 61.977 88.451 110.449 1.00 34.39 N
ATOM 17 C5 G B1014 61.108 89.520 110.618 1.00 33.52 C
ATOM 18 C6 G B1014 59.768 89.551 111.077 1.00 33.22 C
ATOM 19 O6 G B1014 59.057 88.607 111.462 1.00 32.59 O
ATOM 20 N1 G B1014 59.265 90.845 111.085 1.00 31.68 N
ATOM 21 C2 G B1014 59.961 91.965 110.721 1.00 31.38 C
ATOM 22 N2 G B1014 59.300 93.121 110.818 1.00 32.41 N
ATOM 23 N3 G B1014 61.211 91.953 110.300 1.00 31.45 N
ATOM 24 C4 G B1014 61.720 90.706 110.276 1.00 32.95 C
ATOM 25 P U B1015 67.056 90.800 113.457 1.00 38.63 P
ATOM 26 OP1 U B1015 68.461 91.077 113.855 1.00 38.65 O
ATOM 27 OP2 U B1015 66.565 89.404 113.467 1.00 38.81 O
ATOM 28 O5' U B1015 66.090 91.632 114.408 1.00 38.20 O
TER

Atoms:
OP1: (60.654,90.144,114.771)
OP2: (62.482,91.038,113.220)
C3': (58.845,94.942,113.804)
C1': (60.803,96.249,114.055)
C5': (59.845,93.025,115.189)
O4': (60.879,95.173,114.967)
C8: (62.290,94.826,112.554)
O2': (58.674,97.290,114.399)
C6: (64.226,97.094,110.697)
C5: (63.380,96.316,111.507)
C4: (62.506,96.993,112.336)
P: (61.598,91.224,114.388)
C4': (59.600,94.507,115.048)
C2': (59.350,96.360,113.582)
C2: (63.218,98.950,111.631)
N1: (64.113,98.435,110.780)
N3: (62.374,98.325,112.450)
N6: (65.129,96.580,109.859)
N7: (63.233,94.945,111.655)
N9: (61.813,96.027,113.020)
O5': (60.764,92.567,114.178)
O3': (57.447,94.941,114.088)
OP1: (68.102,86.486,110.028)
OP2: (65.659,85.802,110.401)
C3': (65.803,90.887,111.142)
C1': (64.079,91.285,109.582)
C5': (67.056,89.273,109.568)
O6: (59.057,88.607,111.462)
O4': (65.106,90.549,108.932)
C8: (63.082,88.997,110.029)
C2: (59.961,91.965,110.721)
C6: (59.768,89.551,111.077)
C5: (61.108,89.520,110.618)
C4: (61.720,90.706,110.276)
P: (66.657,86.675,109.742)
C4': (66.313,90.575,109.741)
C2': (64.690,91.884,110.852)
O2': (65.166,93.184,110.586)
N1: (59.265,90.845,111.085)
N2: (59.300,93.121,110.818)
N3: (61.211,91.953,110.300)
N7: (61.977,88.451,110.449)
N9: (63.003,90.365,109.930)
O5': (66.254,88.184,110.040)
O3': (66.812,91.431,111.993)
Image (generated by PyMOL):
PyMOL image
show in jmol