ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:A684:A1985

Extra

PDB:
ATOM 1 O3' A A 683 -19.181 145.557 170.261 1.00 0.79 O
ATOM 2 P A A 684 -18.177 145.777 169.038 1.00 6.90 P
ATOM 3 OP1 A A 684 -17.042 144.810 169.225 1.00 6.90 O
ATOM 4 OP2 A A 684 -17.884 147.224 168.863 1.00 6.90 O
ATOM 5 O5' A A 684 -19.071 145.278 167.824 1.00 11.00 O
ATOM 6 C5' A A 684 -19.531 143.922 167.790 1.00 11.00 C
ATOM 7 C4' A A 684 -20.446 143.704 166.623 1.00 11.00 C
ATOM 8 O4' A A 684 -21.757 144.225 166.890 1.00 11.00 O
ATOM 9 C3' A A 684 -20.077 144.384 165.320 1.00 11.00 C
ATOM 10 O3' A A 684 -19.081 143.626 164.637 1.00 11.00 O
ATOM 11 C2' A A 684 -21.411 144.425 164.557 1.00 11.00 C
ATOM 12 O2' A A 684 -21.570 143.385 163.608 1.00 11.00 O
ATOM 13 C1' A A 684 -22.447 144.219 165.671 1.00 11.00 C
ATOM 14 N9 A A 684 -23.602 145.122 165.730 1.00 10.75 N
ATOM 15 C8 A A 684 -24.911 144.798 165.425 1.00 10.75 C
ATOM 16 N7 A A 684 -25.755 145.796 165.538 1.00 10.75 N
ATOM 17 C5 A A 684 -24.955 146.842 165.952 1.00 10.75 C
ATOM 18 C6 A A 684 -25.244 148.151 166.221 1.00 10.75 C
ATOM 19 N6 A A 684 -26.464 148.662 166.117 1.00 10.75 N
ATOM 20 N1 A A 684 -24.227 148.947 166.599 1.00 10.75 N
ATOM 21 C2 A A 684 -22.985 148.424 166.679 1.00 10.75 C
ATOM 22 N3 A A 684 -22.583 147.197 166.441 1.00 10.75 N
ATOM 23 C4 A A 684 -23.626 146.443 166.078 1.00 10.75 C
ATOM 24 P A A 685 -18.157 144.332 163.523 1.00 11.37 P
ATOM 25 OP1 A A 685 -17.575 143.276 162.659 1.00 11.37 O
ATOM 26 OP2 A A 685 -17.255 145.280 164.230 1.00 11.37 O
ATOM 27 O5' A A 685 -19.208 145.133 162.639 1.00 2.48 O
TER

ATOM 1 O3' U B1984 -35.358 149.315 163.056 1.00 19.89 O
ATOM 2 P G B1985 -34.032 150.190 163.085 1.00 48.30 P
ATOM 3 OP1 G B1985 -33.982 150.832 164.413 1.00 25.27 O
ATOM 4 OP2 G B1985 -33.975 151.019 161.855 1.00 25.27 O
ATOM 5 O5' G B1985 -32.883 149.108 163.004 1.00 17.95 O
ATOM 6 C5' G B1985 -32.853 148.000 163.911 1.00 17.95 C
ATOM 7 C4' G B1985 -31.468 147.860 164.473 1.00 17.95 C
ATOM 8 O4' G B1985 -31.360 146.618 165.221 1.00 17.95 O
ATOM 9 C3' G B1985 -30.390 147.743 163.413 1.00 17.95 C
ATOM 10 O3' G B1985 -30.051 148.998 162.845 1.00 17.95 O
ATOM 11 C2' G B1985 -29.277 147.037 164.174 1.00 17.95 C
ATOM 12 O2' G B1985 -28.564 147.889 165.049 1.00 17.95 O
ATOM 13 C1' G B1985 -30.082 146.032 164.999 1.00 17.95 C
ATOM 14 N9 G B1985 -30.264 144.778 164.259 1.00 5.45 N
ATOM 15 C8 G B1985 -31.447 144.232 163.804 1.00 5.45 C
ATOM 16 N7 G B1985 -31.275 143.132 163.125 1.00 5.45 N
ATOM 17 C5 G B1985 -29.900 142.928 163.136 1.00 5.45 C
ATOM 18 C6 G B1985 -29.116 141.896 162.551 1.00 5.45 C
ATOM 19 O6 G B1985 -29.485 140.943 161.867 1.00 5.45 O
ATOM 20 N1 G B1985 -27.766 142.062 162.821 1.00 5.45 N
ATOM 21 C2 G B1985 -27.231 143.095 163.540 1.00 5.45 C
ATOM 22 N2 G B1985 -25.919 143.079 163.652 1.00 5.45 N
ATOM 23 N3 G B1985 -27.938 144.067 164.090 1.00 5.45 N
ATOM 24 C4 G B1985 -29.261 143.921 163.848 1.00 5.45 C
ATOM 25 P G B1986 -29.715 149.090 161.269 1.00 21.74 P
ATOM 26 OP1 G B1986 -29.401 150.516 160.960 1.00 15.38 O
ATOM 27 OP2 G B1986 -30.746 148.363 160.458 1.00 15.38 O
ATOM 28 O5' G B1986 -28.342 148.314 161.175 1.00 1.28 O
TER

Atoms:
OP1: (-17.042,144.810,169.225)
OP2: (-17.884,147.224,168.863)
C3': (-20.077,144.384,165.320)
C1': (-22.447,144.219,165.671)
C5': (-19.531,143.922,167.790)
O4': (-21.757,144.225,166.890)
C8: (-24.911,144.798,165.425)
O2': (-21.570,143.385,163.608)
C6: (-25.244,148.151,166.221)
C5: (-24.955,146.842,165.952)
C4: (-23.626,146.443,166.078)
P: (-18.177,145.777,169.038)
C4': (-20.446,143.704,166.623)
C2': (-21.411,144.425,164.557)
C2: (-22.985,148.424,166.679)
N1: (-24.227,148.947,166.599)
N3: (-22.583,147.197,166.441)
N6: (-26.464,148.662,166.117)
N7: (-25.755,145.796,165.538)
N9: (-23.602,145.122,165.730)
O5': (-19.071,145.278,167.824)
O3': (-19.081,143.626,164.637)
OP1: (-33.982,150.832,164.413)
OP2: (-33.975,151.019,161.855)
C3': (-30.390,147.743,163.413)
C1': (-30.082,146.032,164.999)
C5': (-32.853,148.000,163.911)
O6: (-29.485,140.943,161.867)
O4': (-31.360,146.618,165.221)
C8: (-31.447,144.232,163.804)
C2: (-27.231,143.095,163.540)
C6: (-29.116,141.896,162.551)
C5: (-29.900,142.928,163.136)
C4: (-29.261,143.921,163.848)
P: (-34.032,150.190,163.085)
C4': (-31.468,147.860,164.473)
C2': (-29.277,147.037,164.174)
O2': (-28.564,147.889,165.049)
N1: (-27.766,142.062,162.821)
N2: (-25.919,143.079,163.652)
N3: (-27.938,144.067,164.090)
N7: (-31.275,143.132,163.125)
N9: (-30.264,144.778,164.259)
O5': (-32.883,149.108,163.004)
O3': (-30.051,148.998,162.845)
Image (generated by PyMOL):
PyMOL image
show in jmol