Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XLK:D7:D5
Extra
PDB:
ATOM 1 O3' U A 6 16.163 -3.342 -19.875 1.00 34.37 O
ATOM 2 P A A 7 15.477 -3.244 -18.429 1.00 34.21 P
ATOM 3 OP1 A A 7 15.201 -4.648 -18.040 1.00 32.69 O
ATOM 4 OP2 A A 7 14.351 -2.295 -18.439 1.00 31.74 O
ATOM 5 O5' A A 7 16.707 -2.707 -17.583 1.00 40.90 O
ATOM 6 C5' A A 7 17.873 -3.514 -17.554 1.00 41.96 C
ATOM 7 C4' A A 7 19.076 -2.666 -17.261 1.00 38.88 C
ATOM 8 O4' A A 7 19.149 -1.618 -18.256 1.00 41.16 O
ATOM 9 C3' A A 7 19.026 -1.921 -15.938 1.00 37.78 C
ATOM 10 O3' A A 7 19.412 -2.754 -14.858 1.00 35.13 O
ATOM 11 C2' A A 7 19.956 -0.749 -16.201 1.00 43.16 C
ATOM 12 O2' A A 7 21.301 -1.204 -16.177 1.00 39.32 O
ATOM 13 C1' A A 7 19.610 -0.426 -17.656 1.00 43.93 C
ATOM 14 N9 A A 7 18.574 0.613 -17.835 1.00 43.74 N
ATOM 15 C8 A A 7 17.229 0.435 -18.057 1.00 46.85 C
ATOM 16 N7 A A 7 16.564 1.559 -18.208 1.00 49.86 N
ATOM 17 C5 A A 7 17.536 2.547 -18.092 1.00 50.08 C
ATOM 18 C6 A A 7 17.477 3.958 -18.157 1.00 50.85 C
ATOM 19 N6 A A 7 16.353 4.656 -18.366 1.00 45.33 N
ATOM 20 N1 A A 7 18.638 4.638 -17.999 1.00 53.42 N
ATOM 21 C2 A A 7 19.768 3.944 -17.795 1.00 54.40 C
ATOM 22 N3 A A 7 19.946 2.624 -17.714 1.00 51.69 N
ATOM 23 C4 A A 7 18.780 1.974 -17.875 1.00 47.12 C
ATOM 24 P U A 8 19.640 -2.252 -13.350 1.00 44.18 P
ATOM 25 OP1 U A 8 18.388 -2.522 -12.601 1.00 48.42 O
ATOM 26 OP2 U A 8 20.157 -0.856 -13.393 1.00 49.87 O
ATOM 27 O5' U A 8 20.779 -3.243 -12.884 1.00 48.93 O
TER
ATOM 1 O3' C B 4 7.236 0.320 -17.644 1.00 44.88 O
ATOM 2 P G B 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 3 OP1 G B 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 4 OP2 G B 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 5 O5' G B 5 9.441 0.167 -18.849 1.00 47.45 O
ATOM 6 C5' G B 5 9.714 1.552 -18.967 1.00 45.81 C
ATOM 7 C4' G B 5 11.166 1.825 -18.682 1.00 42.33 C
ATOM 8 O4' G B 5 11.404 1.706 -17.255 1.00 34.76 O
ATOM 9 C3' G B 5 12.149 0.852 -19.310 1.00 42.56 C
ATOM 10 O3' G B 5 12.424 1.138 -20.674 1.00 45.93 O
ATOM 11 C2' G B 5 13.363 0.964 -18.393 1.00 40.08 C
ATOM 12 O2' G B 5 14.182 2.081 -18.729 1.00 36.66 O
ATOM 13 C1' G B 5 12.693 1.176 -17.025 1.00 38.21 C
ATOM 14 N9 G B 5 12.578 -0.132 -16.349 1.00 32.47 N
ATOM 15 C8 G B 5 11.555 -1.045 -16.472 1.00 33.91 C
ATOM 16 N7 G B 5 11.771 -2.148 -15.797 1.00 30.85 N
ATOM 17 C5 G B 5 13.015 -1.952 -15.210 1.00 31.20 C
ATOM 18 C6 G B 5 13.769 -2.804 -14.370 1.00 35.21 C
ATOM 19 O6 G B 5 13.474 -3.941 -13.967 1.00 30.81 O
ATOM 20 N1 G B 5 14.978 -2.216 -14.008 1.00 37.16 N
ATOM 21 C2 G B 5 15.409 -0.964 -14.398 1.00 40.08 C
ATOM 22 N2 G B 5 16.610 -0.569 -13.943 1.00 38.80 N
ATOM 23 N3 G B 5 14.710 -0.162 -15.183 1.00 29.49 N
ATOM 24 C4 G B 5 13.533 -0.714 -15.550 1.00 31.22 C
ATOM 25 P U B 6 12.585 -0.014 -21.793 1.00 46.92 P
ATOM 26 OP1 U B 6 11.403 -0.916 -21.820 1.00 44.87 O
ATOM 27 OP2 U B 6 12.955 0.738 -23.021 1.00 49.40 O
ATOM 28 O5' U B 6 13.846 -0.843 -21.314 1.00 42.75 O
TER
ATOM 2 P A A 7 15.477 -3.244 -18.429 1.00 34.21 P
ATOM 3 OP1 A A 7 15.201 -4.648 -18.040 1.00 32.69 O
ATOM 4 OP2 A A 7 14.351 -2.295 -18.439 1.00 31.74 O
ATOM 5 O5' A A 7 16.707 -2.707 -17.583 1.00 40.90 O
ATOM 6 C5' A A 7 17.873 -3.514 -17.554 1.00 41.96 C
ATOM 7 C4' A A 7 19.076 -2.666 -17.261 1.00 38.88 C
ATOM 8 O4' A A 7 19.149 -1.618 -18.256 1.00 41.16 O
ATOM 9 C3' A A 7 19.026 -1.921 -15.938 1.00 37.78 C
ATOM 10 O3' A A 7 19.412 -2.754 -14.858 1.00 35.13 O
ATOM 11 C2' A A 7 19.956 -0.749 -16.201 1.00 43.16 C
ATOM 12 O2' A A 7 21.301 -1.204 -16.177 1.00 39.32 O
ATOM 13 C1' A A 7 19.610 -0.426 -17.656 1.00 43.93 C
ATOM 14 N9 A A 7 18.574 0.613 -17.835 1.00 43.74 N
ATOM 15 C8 A A 7 17.229 0.435 -18.057 1.00 46.85 C
ATOM 16 N7 A A 7 16.564 1.559 -18.208 1.00 49.86 N
ATOM 17 C5 A A 7 17.536 2.547 -18.092 1.00 50.08 C
ATOM 18 C6 A A 7 17.477 3.958 -18.157 1.00 50.85 C
ATOM 19 N6 A A 7 16.353 4.656 -18.366 1.00 45.33 N
ATOM 20 N1 A A 7 18.638 4.638 -17.999 1.00 53.42 N
ATOM 21 C2 A A 7 19.768 3.944 -17.795 1.00 54.40 C
ATOM 22 N3 A A 7 19.946 2.624 -17.714 1.00 51.69 N
ATOM 23 C4 A A 7 18.780 1.974 -17.875 1.00 47.12 C
ATOM 24 P U A 8 19.640 -2.252 -13.350 1.00 44.18 P
ATOM 25 OP1 U A 8 18.388 -2.522 -12.601 1.00 48.42 O
ATOM 26 OP2 U A 8 20.157 -0.856 -13.393 1.00 49.87 O
ATOM 27 O5' U A 8 20.779 -3.243 -12.884 1.00 48.93 O
TER
ATOM 1 O3' C B 4 7.236 0.320 -17.644 1.00 44.88 O
ATOM 2 P G B 5 7.948 -0.368 -18.924 1.00 42.34 P
ATOM 3 OP1 G B 5 7.283 0.230 -20.106 1.00 48.25 O
ATOM 4 OP2 G B 5 7.956 -1.839 -18.777 1.00 36.33 O
ATOM 5 O5' G B 5 9.441 0.167 -18.849 1.00 47.45 O
ATOM 6 C5' G B 5 9.714 1.552 -18.967 1.00 45.81 C
ATOM 7 C4' G B 5 11.166 1.825 -18.682 1.00 42.33 C
ATOM 8 O4' G B 5 11.404 1.706 -17.255 1.00 34.76 O
ATOM 9 C3' G B 5 12.149 0.852 -19.310 1.00 42.56 C
ATOM 10 O3' G B 5 12.424 1.138 -20.674 1.00 45.93 O
ATOM 11 C2' G B 5 13.363 0.964 -18.393 1.00 40.08 C
ATOM 12 O2' G B 5 14.182 2.081 -18.729 1.00 36.66 O
ATOM 13 C1' G B 5 12.693 1.176 -17.025 1.00 38.21 C
ATOM 14 N9 G B 5 12.578 -0.132 -16.349 1.00 32.47 N
ATOM 15 C8 G B 5 11.555 -1.045 -16.472 1.00 33.91 C
ATOM 16 N7 G B 5 11.771 -2.148 -15.797 1.00 30.85 N
ATOM 17 C5 G B 5 13.015 -1.952 -15.210 1.00 31.20 C
ATOM 18 C6 G B 5 13.769 -2.804 -14.370 1.00 35.21 C
ATOM 19 O6 G B 5 13.474 -3.941 -13.967 1.00 30.81 O
ATOM 20 N1 G B 5 14.978 -2.216 -14.008 1.00 37.16 N
ATOM 21 C2 G B 5 15.409 -0.964 -14.398 1.00 40.08 C
ATOM 22 N2 G B 5 16.610 -0.569 -13.943 1.00 38.80 N
ATOM 23 N3 G B 5 14.710 -0.162 -15.183 1.00 29.49 N
ATOM 24 C4 G B 5 13.533 -0.714 -15.550 1.00 31.22 C
ATOM 25 P U B 6 12.585 -0.014 -21.793 1.00 46.92 P
ATOM 26 OP1 U B 6 11.403 -0.916 -21.820 1.00 44.87 O
ATOM 27 OP2 U B 6 12.955 0.738 -23.021 1.00 49.40 O
ATOM 28 O5' U B 6 13.846 -0.843 -21.314 1.00 42.75 O
TER
Atoms:
OP1: (15.201,-4.648,-18.040)
OP2: (14.351,-2.295,-18.439)
C3': (19.026,-1.921,-15.938)
C1': (19.610,-0.426,-17.656)
C5': (17.873,-3.514,-17.554)
O4': (19.149,-1.618,-18.256)
C8: (17.229,0.435,-18.057)
O2': (21.301,-1.204,-16.177)
C6: (17.477,3.958,-18.157)
C5: (17.536,2.547,-18.092)
C4: (18.780,1.974,-17.875)
P: (15.477,-3.244,-18.429)
C4': (19.076,-2.666,-17.261)
C2': (19.956,-0.749,-16.201)
C2: (19.768,3.944,-17.795)
N1: (18.638,4.638,-17.999)
N3: (19.946,2.624,-17.714)
N6: (16.353,4.656,-18.366)
N7: (16.564,1.559,-18.208)
N9: (18.574,0.613,-17.835)
O5': (16.707,-2.707,-17.583)
O3': (19.412,-2.754,-14.858)
OP2: (14.351,-2.295,-18.439)
C3': (19.026,-1.921,-15.938)
C1': (19.610,-0.426,-17.656)
C5': (17.873,-3.514,-17.554)
O4': (19.149,-1.618,-18.256)
C8: (17.229,0.435,-18.057)
O2': (21.301,-1.204,-16.177)
C6: (17.477,3.958,-18.157)
C5: (17.536,2.547,-18.092)
C4: (18.780,1.974,-17.875)
P: (15.477,-3.244,-18.429)
C4': (19.076,-2.666,-17.261)
C2': (19.956,-0.749,-16.201)
C2: (19.768,3.944,-17.795)
N1: (18.638,4.638,-17.999)
N3: (19.946,2.624,-17.714)
N6: (16.353,4.656,-18.366)
N7: (16.564,1.559,-18.208)
N9: (18.574,0.613,-17.835)
O5': (16.707,-2.707,-17.583)
O3': (19.412,-2.754,-14.858)
OP1: (7.283,0.230,-20.106)
OP2: (7.956,-1.839,-18.777)
C3': (12.149,0.852,-19.310)
C1': (12.693,1.176,-17.025)
C5': (9.714,1.552,-18.967)
O6: (13.474,-3.941,-13.967)
O4': (11.404,1.706,-17.255)
C8: (11.555,-1.045,-16.472)
C2: (15.409,-0.964,-14.398)
C6: (13.769,-2.804,-14.370)
C5: (13.015,-1.952,-15.210)
C4: (13.533,-0.714,-15.550)
P: (7.948,-0.368,-18.924)
C4': (11.166,1.825,-18.682)
C2': (13.363,0.964,-18.393)
O2': (14.182,2.081,-18.729)
N1: (14.978,-2.216,-14.008)
N2: (16.610,-0.569,-13.943)
N3: (14.710,-0.162,-15.183)
N7: (11.771,-2.148,-15.797)
N9: (12.578,-0.132,-16.349)
O5': (9.441,0.167,-18.849)
O3': (12.424,1.138,-20.674)
OP2: (7.956,-1.839,-18.777)
C3': (12.149,0.852,-19.310)
C1': (12.693,1.176,-17.025)
C5': (9.714,1.552,-18.967)
O6: (13.474,-3.941,-13.967)
O4': (11.404,1.706,-17.255)
C8: (11.555,-1.045,-16.472)
C2: (15.409,-0.964,-14.398)
C6: (13.769,-2.804,-14.370)
C5: (13.015,-1.952,-15.210)
C4: (13.533,-0.714,-15.550)
P: (7.948,-0.368,-18.924)
C4': (11.166,1.825,-18.682)
C2': (13.363,0.964,-18.393)
O2': (14.182,2.081,-18.729)
N1: (14.978,-2.216,-14.008)
N2: (16.610,-0.569,-13.943)
N3: (14.710,-0.162,-15.183)
N7: (11.771,-2.148,-15.797)
N9: (12.578,-0.132,-16.349)
O5': (9.441,0.167,-18.849)
O3': (12.424,1.138,-20.674)
Image (generated by PyMOL):