ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:944:942

Extra

PDB:
ATOM 1 O3' A A 43 80.901 20.250 99.547 1.00 70.35 O
ATOM 2 P A A 44 79.781 19.907 98.455 1.00 70.44 P
ATOM 3 OP1 A A 44 78.499 19.742 99.186 1.00 70.18 O
ATOM 4 OP2 A A 44 80.273 18.815 97.570 1.00 69.06 O
ATOM 5 O5' A A 44 79.698 21.236 97.584 1.00 71.85 O
ATOM 6 C5' A A 44 79.236 22.479 98.160 1.00 70.40 C
ATOM 7 C4' A A 44 79.353 23.592 97.148 1.00 68.11 C
ATOM 8 O4' A A 44 80.756 23.815 96.858 1.00 67.65 O
ATOM 9 C3' A A 44 78.723 23.288 95.798 1.00 67.30 C
ATOM 10 O3' A A 44 77.329 23.581 95.793 1.00 64.76 O
ATOM 11 C2' A A 44 79.519 24.180 94.856 1.00 68.06 C
ATOM 12 O2' A A 44 79.074 25.522 94.860 1.00 69.24 O
ATOM 13 C1' A A 44 80.917 24.102 95.479 1.00 68.40 C
ATOM 14 N9 A A 44 81.762 23.065 94.889 1.00 68.00 N
ATOM 15 C8 A A 44 82.072 21.826 95.392 1.00 67.98 C
ATOM 16 N7 A A 44 82.853 21.121 94.613 1.00 68.62 N
ATOM 17 C5 A A 44 83.075 21.951 93.524 1.00 68.63 C
ATOM 18 C6 A A 44 83.820 21.787 92.344 1.00 69.67 C
ATOM 19 N6 A A 44 84.517 20.687 92.049 1.00 71.42 N
ATOM 20 N1 A A 44 83.826 22.806 91.464 1.00 69.49 N
ATOM 21 C2 A A 44 83.138 23.911 91.757 1.00 69.48 C
ATOM 22 N3 A A 44 82.405 24.186 92.829 1.00 69.33 N
ATOM 23 C4 A A 44 82.413 23.151 93.683 1.00 68.40 C
ATOM 24 P C A 45 76.317 22.644 94.966 1.00 63.08 P
ATOM 25 OP1 C A 45 74.954 23.203 95.173 1.00 62.40 O
ATOM 26 OP2 C A 45 76.589 21.231 95.319 1.00 62.56 O
ATOM 27 O5' C A 45 76.739 22.852 93.445 1.00 62.30 O
TER

ATOM 1 O3' C B 41 90.112 18.587 95.457 1.00 78.38 O
ATOM 2 P G B 42 89.398 17.873 94.217 1.00 78.57 P
ATOM 3 OP1 G B 42 89.464 16.407 94.436 1.00 80.09 O
ATOM 4 OP2 G B 42 89.919 18.443 92.949 1.00 77.46 O
ATOM 5 O5' G B 42 87.892 18.341 94.396 1.00 77.88 O
ATOM 6 C5' G B 42 86.904 17.988 93.442 1.00 76.49 C
ATOM 7 C4' G B 42 85.558 17.945 94.102 1.00 76.00 C
ATOM 8 O4' G B 42 84.563 17.608 93.114 1.00 76.85 O
ATOM 9 C3' G B 42 85.386 16.905 95.197 1.00 75.58 C
ATOM 10 O3' G B 42 84.317 17.317 96.036 1.00 74.37 O
ATOM 11 C2' G B 42 85.015 15.659 94.403 1.00 76.34 C
ATOM 12 O2' G B 42 84.219 14.762 95.149 1.00 76.59 O
ATOM 13 C1' G B 42 84.208 16.247 93.242 1.00 77.02 C
ATOM 14 N9 G B 42 84.456 15.616 91.950 1.00 77.40 N
ATOM 15 C8 G B 42 85.152 14.457 91.690 1.00 77.67 C
ATOM 16 N7 G B 42 85.166 14.144 90.423 1.00 77.25 N
ATOM 17 C5 G B 42 84.441 15.156 89.812 1.00 77.28 C
ATOM 18 C6 G B 42 84.100 15.347 88.456 1.00 77.68 C
ATOM 19 O6 G B 42 84.366 14.625 87.488 1.00 78.68 O
ATOM 20 N1 G B 42 83.362 16.513 88.275 1.00 77.07 N
ATOM 21 C2 G B 42 82.990 17.376 89.274 1.00 76.11 C
ATOM 22 N2 G B 42 82.276 18.443 88.903 1.00 76.54 N
ATOM 23 N3 G B 42 83.291 17.204 90.542 1.00 76.10 N
ATOM 24 C4 G B 42 84.011 16.080 90.739 1.00 77.15 C
ATOM 25 P A B 43 84.331 16.955 97.599 1.00 72.79 P
ATOM 26 OP1 A B 43 85.729 16.880 98.103 1.00 74.23 O
ATOM 27 OP2 A B 43 83.427 15.794 97.763 1.00 73.27 O
ATOM 28 O5' A B 43 83.632 18.225 98.252 1.00 72.03 O
TER

Atoms:
OP1: (78.499,19.742,99.186)
OP2: (80.273,18.815,97.570)
C3': (78.723,23.288,95.798)
C1': (80.917,24.102,95.479)
C5': (79.236,22.479,98.160)
O4': (80.756,23.815,96.858)
C8: (82.072,21.826,95.392)
O2': (79.074,25.522,94.860)
C6: (83.820,21.787,92.344)
C5: (83.075,21.951,93.524)
C4: (82.413,23.151,93.683)
P: (79.781,19.907,98.455)
C4': (79.353,23.592,97.148)
C2': (79.519,24.180,94.856)
C2: (83.138,23.911,91.757)
N1: (83.826,22.806,91.464)
N3: (82.405,24.186,92.829)
N6: (84.517,20.687,92.049)
N7: (82.853,21.121,94.613)
N9: (81.762,23.065,94.889)
O5': (79.698,21.236,97.584)
O3': (77.329,23.581,95.793)
OP1: (89.464,16.407,94.436)
OP2: (89.919,18.443,92.949)
C3': (85.386,16.905,95.197)
C1': (84.208,16.247,93.242)
C5': (86.904,17.988,93.442)
O6: (84.366,14.625,87.488)
O4': (84.563,17.608,93.114)
C8: (85.152,14.457,91.690)
C2: (82.990,17.376,89.274)
C6: (84.100,15.347,88.456)
C5: (84.441,15.156,89.812)
C4: (84.011,16.080,90.739)
P: (89.398,17.873,94.217)
C4': (85.558,17.945,94.102)
C2': (85.015,15.659,94.403)
O2': (84.219,14.762,95.149)
N1: (83.362,16.513,88.275)
N2: (82.276,18.443,88.903)
N3: (83.291,17.204,90.542)
N7: (85.166,14.144,90.423)
N9: (84.456,15.616,91.950)
O5': (87.892,18.341,94.396)
O3': (84.317,17.317,96.036)
Image (generated by PyMOL):
PyMOL image
show in jmol