Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A8:A31
Extra
PDB:
ATOM 1 O3' U A 7 14.069 6.400 3.635 1.00 16.58 O
ATOM 2 P A A 8 14.502 4.869 3.397 1.00 16.90 P
ATOM 3 OP1 A A 8 13.773 4.291 2.214 1.00 17.04 O
ATOM 4 OP2 A A 8 14.351 4.224 4.726 1.00 16.03 O
ATOM 5 O5' A A 8 16.057 4.949 3.092 1.00 16.99 O
ATOM 6 C5' A A 8 16.937 5.684 3.940 1.00 16.50 C
ATOM 7 C4' A A 8 18.220 5.970 3.200 1.00 16.03 C
ATOM 8 O4' A A 8 17.896 6.559 1.914 1.00 15.15 O
ATOM 9 C3' A A 8 19.123 7.000 3.865 1.00 15.88 C
ATOM 10 O3' A A 8 20.007 6.350 4.779 1.00 16.04 O
ATOM 11 C2' A A 8 19.932 7.535 2.689 1.00 14.37 C
ATOM 12 O2' A A 8 21.038 6.689 2.437 1.00 14.07 O
ATOM 13 C1' A A 8 18.924 7.447 1.539 1.00 15.13 C
ATOM 14 N9 A A 8 18.313 8.717 1.157 1.00 14.71 N
ATOM 15 C8 A A 8 18.027 9.134 -0.113 1.00 14.98 C
ATOM 16 N7 A A 8 17.513 10.334 -0.171 1.00 15.52 N
ATOM 17 C5 A A 8 17.440 10.727 1.159 1.00 14.12 C
ATOM 18 C6 A A 8 16.984 11.892 1.762 1.00 13.27 C
ATOM 19 N6 A A 8 16.517 12.944 1.074 1.00 13.02 N
ATOM 20 N1 A A 8 17.029 11.962 3.109 1.00 13.36 N
ATOM 21 C2 A A 8 17.522 10.921 3.791 1.00 12.32 C
ATOM 22 N3 A A 8 17.996 9.768 3.328 1.00 12.80 N
ATOM 23 C4 A A 8 17.924 9.737 1.988 1.00 13.37 C
ATOM 24 P A A 9 19.792 6.521 6.367 1.00 16.08 P
ATOM 25 OP1 A A 9 20.740 5.538 7.026 1.00 18.75 O
ATOM 26 OP2 A A 9 18.370 6.463 6.689 1.00 17.24 O
ATOM 27 O5' A A 9 20.280 8.006 6.656 1.00 14.02 O
TER
ATOM 1 O3' A B 30 15.065 20.459 -4.029 1.00 19.25 O
ATOM 2 P G B 31 13.590 19.837 -3.836 1.00 21.76 P
ATOM 3 OP1 G B 31 13.111 19.621 -5.232 1.00 20.58 O
ATOM 4 OP2 G B 31 12.796 20.615 -2.886 1.00 20.12 O
ATOM 5 O5' G B 31 13.859 18.416 -3.180 1.00 17.63 O
ATOM 6 C5' G B 31 14.553 17.429 -3.908 1.00 16.53 C
ATOM 7 C4' G B 31 14.840 16.245 -3.025 1.00 16.28 C
ATOM 8 O4' G B 31 15.704 16.691 -1.942 1.00 15.33 O
ATOM 9 C3' G B 31 13.638 15.650 -2.304 1.00 14.19 C
ATOM 10 O3' G B 31 12.948 14.718 -3.148 1.00 15.95 O
ATOM 11 C2' G B 31 14.333 14.927 -1.152 1.00 15.24 C
ATOM 12 O2' G B 31 14.970 13.723 -1.593 1.00 11.22 O
ATOM 13 C1' G B 31 15.417 15.944 -0.780 1.00 14.15 C
ATOM 14 N9 G B 31 15.039 16.881 0.277 1.00 15.14 N
ATOM 15 C8 G B 31 14.429 18.103 0.129 1.00 13.16 C
ATOM 16 N7 G B 31 14.249 18.721 1.264 1.00 14.91 N
ATOM 17 C5 G B 31 14.764 17.852 2.223 1.00 13.65 C
ATOM 18 C6 G B 31 14.850 17.980 3.646 1.00 14.21 C
ATOM 19 O6 G B 31 14.457 18.922 4.373 1.00 13.60 O
ATOM 20 N1 G B 31 15.451 16.861 4.225 1.00 14.00 N
ATOM 21 C2 G B 31 15.898 15.760 3.534 1.00 13.23 C
ATOM 22 N2 G B 31 16.436 14.773 4.271 1.00 13.07 N
ATOM 23 N3 G B 31 15.821 15.634 2.214 1.00 12.14 N
ATOM 24 C4 G B 31 15.250 16.709 1.631 1.00 13.14 C
ATOM 25 P U B 32 11.385 14.951 -3.517 1.00 19.08 P
ATOM 26 OP1 U B 32 11.197 14.163 -4.756 1.00 17.31 O
ATOM 27 OP2 U B 32 11.026 16.379 -3.510 1.00 17.84 O
ATOM 28 O5' U B 32 10.608 14.251 -2.313 1.00 18.59 O
TER
ATOM 2 P A A 8 14.502 4.869 3.397 1.00 16.90 P
ATOM 3 OP1 A A 8 13.773 4.291 2.214 1.00 17.04 O
ATOM 4 OP2 A A 8 14.351 4.224 4.726 1.00 16.03 O
ATOM 5 O5' A A 8 16.057 4.949 3.092 1.00 16.99 O
ATOM 6 C5' A A 8 16.937 5.684 3.940 1.00 16.50 C
ATOM 7 C4' A A 8 18.220 5.970 3.200 1.00 16.03 C
ATOM 8 O4' A A 8 17.896 6.559 1.914 1.00 15.15 O
ATOM 9 C3' A A 8 19.123 7.000 3.865 1.00 15.88 C
ATOM 10 O3' A A 8 20.007 6.350 4.779 1.00 16.04 O
ATOM 11 C2' A A 8 19.932 7.535 2.689 1.00 14.37 C
ATOM 12 O2' A A 8 21.038 6.689 2.437 1.00 14.07 O
ATOM 13 C1' A A 8 18.924 7.447 1.539 1.00 15.13 C
ATOM 14 N9 A A 8 18.313 8.717 1.157 1.00 14.71 N
ATOM 15 C8 A A 8 18.027 9.134 -0.113 1.00 14.98 C
ATOM 16 N7 A A 8 17.513 10.334 -0.171 1.00 15.52 N
ATOM 17 C5 A A 8 17.440 10.727 1.159 1.00 14.12 C
ATOM 18 C6 A A 8 16.984 11.892 1.762 1.00 13.27 C
ATOM 19 N6 A A 8 16.517 12.944 1.074 1.00 13.02 N
ATOM 20 N1 A A 8 17.029 11.962 3.109 1.00 13.36 N
ATOM 21 C2 A A 8 17.522 10.921 3.791 1.00 12.32 C
ATOM 22 N3 A A 8 17.996 9.768 3.328 1.00 12.80 N
ATOM 23 C4 A A 8 17.924 9.737 1.988 1.00 13.37 C
ATOM 24 P A A 9 19.792 6.521 6.367 1.00 16.08 P
ATOM 25 OP1 A A 9 20.740 5.538 7.026 1.00 18.75 O
ATOM 26 OP2 A A 9 18.370 6.463 6.689 1.00 17.24 O
ATOM 27 O5' A A 9 20.280 8.006 6.656 1.00 14.02 O
TER
ATOM 1 O3' A B 30 15.065 20.459 -4.029 1.00 19.25 O
ATOM 2 P G B 31 13.590 19.837 -3.836 1.00 21.76 P
ATOM 3 OP1 G B 31 13.111 19.621 -5.232 1.00 20.58 O
ATOM 4 OP2 G B 31 12.796 20.615 -2.886 1.00 20.12 O
ATOM 5 O5' G B 31 13.859 18.416 -3.180 1.00 17.63 O
ATOM 6 C5' G B 31 14.553 17.429 -3.908 1.00 16.53 C
ATOM 7 C4' G B 31 14.840 16.245 -3.025 1.00 16.28 C
ATOM 8 O4' G B 31 15.704 16.691 -1.942 1.00 15.33 O
ATOM 9 C3' G B 31 13.638 15.650 -2.304 1.00 14.19 C
ATOM 10 O3' G B 31 12.948 14.718 -3.148 1.00 15.95 O
ATOM 11 C2' G B 31 14.333 14.927 -1.152 1.00 15.24 C
ATOM 12 O2' G B 31 14.970 13.723 -1.593 1.00 11.22 O
ATOM 13 C1' G B 31 15.417 15.944 -0.780 1.00 14.15 C
ATOM 14 N9 G B 31 15.039 16.881 0.277 1.00 15.14 N
ATOM 15 C8 G B 31 14.429 18.103 0.129 1.00 13.16 C
ATOM 16 N7 G B 31 14.249 18.721 1.264 1.00 14.91 N
ATOM 17 C5 G B 31 14.764 17.852 2.223 1.00 13.65 C
ATOM 18 C6 G B 31 14.850 17.980 3.646 1.00 14.21 C
ATOM 19 O6 G B 31 14.457 18.922 4.373 1.00 13.60 O
ATOM 20 N1 G B 31 15.451 16.861 4.225 1.00 14.00 N
ATOM 21 C2 G B 31 15.898 15.760 3.534 1.00 13.23 C
ATOM 22 N2 G B 31 16.436 14.773 4.271 1.00 13.07 N
ATOM 23 N3 G B 31 15.821 15.634 2.214 1.00 12.14 N
ATOM 24 C4 G B 31 15.250 16.709 1.631 1.00 13.14 C
ATOM 25 P U B 32 11.385 14.951 -3.517 1.00 19.08 P
ATOM 26 OP1 U B 32 11.197 14.163 -4.756 1.00 17.31 O
ATOM 27 OP2 U B 32 11.026 16.379 -3.510 1.00 17.84 O
ATOM 28 O5' U B 32 10.608 14.251 -2.313 1.00 18.59 O
TER
Atoms:
OP1: (13.773,4.291,2.214)
OP2: (14.351,4.224,4.726)
C3': (19.123,7.000,3.865)
C1': (18.924,7.447,1.539)
C5': (16.937,5.684,3.940)
O4': (17.896,6.559,1.914)
C8: (18.027,9.134,-0.113)
O2': (21.038,6.689,2.437)
C6: (16.984,11.892,1.762)
C5: (17.440,10.727,1.159)
C4: (17.924,9.737,1.988)
P: (14.502,4.869,3.397)
C4': (18.220,5.970,3.200)
C2': (19.932,7.535,2.689)
C2: (17.522,10.921,3.791)
N1: (17.029,11.962,3.109)
N3: (17.996,9.768,3.328)
N6: (16.517,12.944,1.074)
N7: (17.513,10.334,-0.171)
N9: (18.313,8.717,1.157)
O5': (16.057,4.949,3.092)
O3': (20.007,6.350,4.779)
OP2: (14.351,4.224,4.726)
C3': (19.123,7.000,3.865)
C1': (18.924,7.447,1.539)
C5': (16.937,5.684,3.940)
O4': (17.896,6.559,1.914)
C8: (18.027,9.134,-0.113)
O2': (21.038,6.689,2.437)
C6: (16.984,11.892,1.762)
C5: (17.440,10.727,1.159)
C4: (17.924,9.737,1.988)
P: (14.502,4.869,3.397)
C4': (18.220,5.970,3.200)
C2': (19.932,7.535,2.689)
C2: (17.522,10.921,3.791)
N1: (17.029,11.962,3.109)
N3: (17.996,9.768,3.328)
N6: (16.517,12.944,1.074)
N7: (17.513,10.334,-0.171)
N9: (18.313,8.717,1.157)
O5': (16.057,4.949,3.092)
O3': (20.007,6.350,4.779)
OP1: (13.111,19.621,-5.232)
OP2: (12.796,20.615,-2.886)
C3': (13.638,15.650,-2.304)
C1': (15.417,15.944,-0.780)
C5': (14.553,17.429,-3.908)
O6: (14.457,18.922,4.373)
O4': (15.704,16.691,-1.942)
C8: (14.429,18.103,0.129)
C2: (15.898,15.760,3.534)
C6: (14.850,17.980,3.646)
C5: (14.764,17.852,2.223)
C4: (15.250,16.709,1.631)
P: (13.590,19.837,-3.836)
C4': (14.840,16.245,-3.025)
C2': (14.333,14.927,-1.152)
O2': (14.970,13.723,-1.593)
N1: (15.451,16.861,4.225)
N2: (16.436,14.773,4.271)
N3: (15.821,15.634,2.214)
N7: (14.249,18.721,1.264)
N9: (15.039,16.881,0.277)
O5': (13.859,18.416,-3.180)
O3': (12.948,14.718,-3.148)
OP2: (12.796,20.615,-2.886)
C3': (13.638,15.650,-2.304)
C1': (15.417,15.944,-0.780)
C5': (14.553,17.429,-3.908)
O6: (14.457,18.922,4.373)
O4': (15.704,16.691,-1.942)
C8: (14.429,18.103,0.129)
C2: (15.898,15.760,3.534)
C6: (14.850,17.980,3.646)
C5: (14.764,17.852,2.223)
C4: (15.250,16.709,1.631)
P: (13.590,19.837,-3.836)
C4': (14.840,16.245,-3.025)
C2': (14.333,14.927,-1.152)
O2': (14.970,13.723,-1.593)
N1: (15.451,16.861,4.225)
N2: (16.436,14.773,4.271)
N3: (15.821,15.634,2.214)
N7: (14.249,18.721,1.264)
N9: (15.039,16.881,0.277)
O5': (13.859,18.416,-3.180)
O3': (12.948,14.718,-3.148)
Image (generated by PyMOL):