ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A977:A974

Extra

PDB:
ATOM 1 O3' U A 976 -121.261 -60.214 2.526 1.00 99.87 O
ATOM 2 P A A 977 -120.552 -60.541 1.130 1.00101.00 P
ATOM 3 OP1 A A 977 -121.193 -59.712 0.071 1.00 94.01 O
ATOM 4 OP2 A A 977 -120.509 -62.011 0.985 1.00 86.90 O
ATOM 5 O5' A A 977 -119.064 -60.041 1.380 1.00 86.66 O
ATOM 6 C5' A A 977 -118.252 -60.756 2.284 1.00 83.50 C
ATOM 7 C4' A A 977 -116.994 -61.210 1.572 1.00 77.98 C
ATOM 8 O4' A A 977 -116.287 -60.053 1.065 1.00 70.01 O
ATOM 9 C3' A A 977 -116.019 -61.974 2.448 1.00 59.46 C
ATOM 10 O3' A A 977 -116.253 -63.349 2.219 1.00 61.38 O
ATOM 11 C2' A A 977 -114.684 -61.578 1.853 1.00 61.17 C
ATOM 12 O2' A A 977 -114.452 -62.359 0.698 1.00 64.12 O
ATOM 13 C1' A A 977 -114.924 -60.139 1.408 1.00 68.54 C
ATOM 14 N9 A A 977 -114.654 -59.067 2.361 1.00 66.26 N
ATOM 15 C8 A A 977 -115.551 -58.408 3.151 1.00 69.61 C
ATOM 16 N7 A A 977 -115.008 -57.472 3.891 1.00 69.02 N
ATOM 17 C5 A A 977 -113.665 -57.517 3.556 1.00 64.30 C
ATOM 18 C6 A A 977 -112.540 -56.781 3.990 1.00 65.27 C
ATOM 19 N6 A A 977 -112.596 -55.802 4.900 1.00 73.98 N
ATOM 20 N1 A A 977 -111.345 -57.089 3.449 1.00 55.70 N
ATOM 21 C2 A A 977 -111.292 -58.063 2.536 1.00 62.55 C
ATOM 22 N3 A A 977 -112.270 -58.823 2.051 1.00 62.35 N
ATOM 23 C4 A A 977 -113.438 -58.493 2.609 1.00 62.64 C
ATOM 24 P A A 978 -116.235 -64.386 3.432 1.00 85.72 P
ATOM 25 OP1 A A 978 -116.880 -65.622 2.937 1.00 93.18 O
ATOM 26 OP2 A A 978 -116.732 -63.735 4.668 1.00 65.92 O
ATOM 27 O5' A A 978 -114.665 -64.632 3.646 1.00100.00 O
TER

ATOM 1 O3' C B 973 -119.068 -52.496 11.143 1.00 42.96 O
ATOM 2 P G B 974 -119.683 -52.124 9.721 1.00 49.11 P
ATOM 3 OP1 G B 974 -119.808 -50.646 9.627 1.00 50.40 O
ATOM 4 OP2 G B 974 -120.861 -53.008 9.526 1.00 60.92 O
ATOM 5 O5' G B 974 -118.603 -52.631 8.672 1.00 39.50 O
ATOM 6 C5' G B 974 -117.294 -52.899 9.095 1.00 41.32 C
ATOM 7 C4' G B 974 -116.713 -53.983 8.215 1.00 40.45 C
ATOM 8 O4' G B 974 -117.031 -55.272 8.784 1.00 49.87 O
ATOM 9 C3' G B 974 -117.290 -54.058 6.811 1.00 40.29 C
ATOM 10 O3' G B 974 -116.653 -53.130 5.949 1.00 49.36 O
ATOM 11 C2' G B 974 -116.880 -55.466 6.421 1.00 48.19 C
ATOM 12 O2' G B 974 -115.591 -55.468 5.843 1.00 42.49 O
ATOM 13 C1' G B 974 -116.932 -56.231 7.752 1.00 60.45 C
ATOM 14 N9 G B 974 -118.126 -57.061 7.736 1.00 58.38 N
ATOM 15 C8 G B 974 -119.370 -56.728 8.193 1.00 64.12 C
ATOM 16 N7 G B 974 -120.250 -57.668 7.997 1.00 64.89 N
ATOM 17 C5 G B 974 -119.552 -58.686 7.364 1.00 65.21 C
ATOM 18 C6 G B 974 -119.992 -59.954 6.906 1.00 76.38 C
ATOM 19 O6 G B 974 -121.131 -60.448 6.972 1.00 78.24 O
ATOM 20 N1 G B 974 -118.946 -60.669 6.322 1.00 72.11 N
ATOM 21 C2 G B 974 -117.649 -60.212 6.195 1.00 68.85 C
ATOM 22 N2 G B 974 -116.770 -61.032 5.600 1.00 67.15 N
ATOM 23 N3 G B 974 -117.229 -59.027 6.619 1.00 64.46 N
ATOM 24 C4 G B 974 -118.236 -58.320 7.192 1.00 60.04 C
ATOM 25 P A B 975 -117.531 -52.142 5.051 1.00 48.35 P
ATOM 26 OP1 A B 975 -116.658 -51.331 4.166 1.00 47.53 O
ATOM 27 OP2 A B 975 -118.455 -51.464 5.990 1.00 61.40 O
ATOM 28 O5' A B 975 -118.325 -53.178 4.135 1.00 56.09 O
TER

Atoms:
OP1: (-121.193,-59.712,0.071)
OP2: (-120.509,-62.011,0.985)
C3': (-116.019,-61.974,2.448)
C1': (-114.924,-60.139,1.408)
C5': (-118.252,-60.756,2.284)
O4': (-116.287,-60.053,1.065)
C8: (-115.551,-58.408,3.151)
O2': (-114.452,-62.359,0.698)
C6: (-112.540,-56.781,3.990)
C5: (-113.665,-57.517,3.556)
C4: (-113.438,-58.493,2.609)
P: (-120.552,-60.541,1.130)
C4': (-116.994,-61.210,1.572)
C2': (-114.684,-61.578,1.853)
C2: (-111.292,-58.063,2.536)
N1: (-111.345,-57.089,3.449)
N3: (-112.270,-58.823,2.051)
N6: (-112.596,-55.802,4.900)
N7: (-115.008,-57.472,3.891)
N9: (-114.654,-59.067,2.361)
O5': (-119.064,-60.041,1.380)
O3': (-116.253,-63.349,2.219)
OP1: (-119.808,-50.646,9.627)
OP2: (-120.861,-53.008,9.526)
C3': (-117.290,-54.058,6.811)
C1': (-116.932,-56.231,7.752)
C5': (-117.294,-52.899,9.095)
O6: (-121.131,-60.448,6.972)
O4': (-117.031,-55.272,8.784)
C8: (-119.370,-56.728,8.193)
C2: (-117.649,-60.212,6.195)
C6: (-119.992,-59.954,6.906)
C5: (-119.552,-58.686,7.364)
C4: (-118.236,-58.320,7.192)
P: (-119.683,-52.124,9.721)
C4': (-116.713,-53.983,8.215)
C2': (-116.880,-55.466,6.421)
O2': (-115.591,-55.468,5.843)
N1: (-118.946,-60.669,6.322)
N2: (-116.770,-61.032,5.600)
N3: (-117.229,-59.027,6.619)
N7: (-120.250,-57.668,7.997)
N9: (-118.126,-57.061,7.736)
O5': (-118.603,-52.631,8.672)
O3': (-116.653,-53.130,5.949)
Image (generated by PyMOL):
PyMOL image
show in jmol