Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1L3D:A20:A15
Extra
PDB:
ATOM 1 O3' A A 19 44.667 47.363 18.969 1.00 48.41 O
ATOM 2 P A A 20 44.664 46.923 17.422 1.00 49.44 P
ATOM 3 OP1 A A 20 45.457 47.872 16.604 1.00 49.44 O
ATOM 4 OP2 A A 20 43.227 46.701 17.131 1.00 44.84 O
ATOM 5 O5' A A 20 45.431 45.523 17.412 1.00 50.92 O
ATOM 6 C5' A A 20 46.840 45.450 17.698 1.00 54.98 C
ATOM 7 C4' A A 20 47.271 44.008 17.817 1.00 56.48 C
ATOM 8 O4' A A 20 46.716 43.410 19.008 1.00 56.12 O
ATOM 9 C3' A A 20 46.753 43.153 16.689 1.00 57.02 C
ATOM 10 O3' A A 20 47.618 43.231 15.608 1.00 59.02 O
ATOM 11 C2' A A 20 46.662 41.764 17.294 1.00 57.76 C
ATOM 12 O2' A A 20 47.880 41.043 17.342 1.00 61.70 O
ATOM 13 C1' A A 20 46.260 42.105 18.716 1.00 55.49 C
ATOM 14 N9 A A 20 44.821 42.133 18.864 1.00 53.72 N
ATOM 15 C8 A A 20 44.035 43.238 19.001 1.00 52.66 C
ATOM 16 N7 A A 20 42.784 42.959 19.254 1.00 52.63 N
ATOM 17 C5 A A 20 42.744 41.574 19.247 1.00 52.39 C
ATOM 18 C6 A A 20 41.709 40.659 19.455 1.00 52.56 C
ATOM 19 N6 A A 20 40.453 41.017 19.735 1.00 52.60 N
ATOM 20 N1 A A 20 42.005 39.346 19.368 1.00 52.18 N
ATOM 21 C2 A A 20 43.260 38.996 19.089 1.00 53.28 C
ATOM 22 N3 A A 20 44.320 39.765 18.876 1.00 53.27 N
ATOM 23 C4 A A 20 43.988 41.057 18.974 1.00 52.83 C
ATOM 24 P C A 21 46.999 43.223 14.151 1.00 61.41 P
ATOM 25 OP1 C A 21 48.125 43.273 13.189 1.00 60.71 O
ATOM 26 OP2 C A 21 45.962 44.278 14.127 1.00 62.39 O
ATOM 27 O5' C A 21 46.274 41.811 14.089 1.00 59.71 O
TER
ATOM 1 O3' C B 14 31.998 43.565 18.998 1.00 41.48 O
ATOM 2 P G B 15 32.622 43.803 20.462 1.00 43.30 P
ATOM 3 OP1 G B 15 32.486 42.570 21.263 1.00 43.12 O
ATOM 4 OP2 G B 15 32.088 45.082 20.992 1.00 42.79 O
ATOM 5 O5' G B 15 34.164 43.993 20.163 1.00 42.36 O
ATOM 6 C5' G B 15 34.924 42.898 19.672 1.00 42.82 C
ATOM 7 C4' G B 15 36.325 43.338 19.358 1.00 42.97 C
ATOM 8 O4' G B 15 36.262 44.347 18.312 1.00 42.33 O
ATOM 9 C3' G B 15 37.118 44.003 20.479 1.00 42.77 C
ATOM 10 O3' G B 15 37.739 43.092 21.392 1.00 43.23 O
ATOM 11 C2' G B 15 38.148 44.801 19.683 1.00 42.74 C
ATOM 12 O2' G B 15 39.218 44.006 19.216 1.00 44.54 O
ATOM 13 C1' G B 15 37.328 45.256 18.476 1.00 40.46 C
ATOM 14 N9 G B 15 36.801 46.589 18.721 1.00 37.77 N
ATOM 15 C8 G B 15 35.528 46.967 19.062 1.00 38.57 C
ATOM 16 N7 G B 15 35.411 48.263 19.238 1.00 38.34 N
ATOM 17 C5 G B 15 36.686 48.752 18.995 1.00 37.49 C
ATOM 18 C6 G B 15 37.186 50.071 19.021 1.00 37.65 C
ATOM 19 O6 G B 15 36.593 51.104 19.263 1.00 40.68 O
ATOM 20 N1 G B 15 38.531 50.117 18.716 1.00 37.82 N
ATOM 21 C2 G B 15 39.306 49.027 18.411 1.00 37.92 C
ATOM 22 N2 G B 15 40.583 49.271 18.148 1.00 36.69 N
ATOM 23 N3 G B 15 38.856 47.791 18.370 1.00 37.06 N
ATOM 24 C4 G B 15 37.547 47.729 18.672 1.00 37.77 C
ATOM 25 P C B 16 37.853 43.477 22.964 1.00 47.35 P
ATOM 26 OP1 C B 16 38.022 42.228 23.755 1.00 44.59 O
ATOM 27 OP2 C B 16 36.741 44.403 23.311 1.00 44.36 O
ATOM 28 O5' C B 16 39.182 44.343 23.087 1.00 41.35 O
TER
ATOM 2 P A A 20 44.664 46.923 17.422 1.00 49.44 P
ATOM 3 OP1 A A 20 45.457 47.872 16.604 1.00 49.44 O
ATOM 4 OP2 A A 20 43.227 46.701 17.131 1.00 44.84 O
ATOM 5 O5' A A 20 45.431 45.523 17.412 1.00 50.92 O
ATOM 6 C5' A A 20 46.840 45.450 17.698 1.00 54.98 C
ATOM 7 C4' A A 20 47.271 44.008 17.817 1.00 56.48 C
ATOM 8 O4' A A 20 46.716 43.410 19.008 1.00 56.12 O
ATOM 9 C3' A A 20 46.753 43.153 16.689 1.00 57.02 C
ATOM 10 O3' A A 20 47.618 43.231 15.608 1.00 59.02 O
ATOM 11 C2' A A 20 46.662 41.764 17.294 1.00 57.76 C
ATOM 12 O2' A A 20 47.880 41.043 17.342 1.00 61.70 O
ATOM 13 C1' A A 20 46.260 42.105 18.716 1.00 55.49 C
ATOM 14 N9 A A 20 44.821 42.133 18.864 1.00 53.72 N
ATOM 15 C8 A A 20 44.035 43.238 19.001 1.00 52.66 C
ATOM 16 N7 A A 20 42.784 42.959 19.254 1.00 52.63 N
ATOM 17 C5 A A 20 42.744 41.574 19.247 1.00 52.39 C
ATOM 18 C6 A A 20 41.709 40.659 19.455 1.00 52.56 C
ATOM 19 N6 A A 20 40.453 41.017 19.735 1.00 52.60 N
ATOM 20 N1 A A 20 42.005 39.346 19.368 1.00 52.18 N
ATOM 21 C2 A A 20 43.260 38.996 19.089 1.00 53.28 C
ATOM 22 N3 A A 20 44.320 39.765 18.876 1.00 53.27 N
ATOM 23 C4 A A 20 43.988 41.057 18.974 1.00 52.83 C
ATOM 24 P C A 21 46.999 43.223 14.151 1.00 61.41 P
ATOM 25 OP1 C A 21 48.125 43.273 13.189 1.00 60.71 O
ATOM 26 OP2 C A 21 45.962 44.278 14.127 1.00 62.39 O
ATOM 27 O5' C A 21 46.274 41.811 14.089 1.00 59.71 O
TER
ATOM 1 O3' C B 14 31.998 43.565 18.998 1.00 41.48 O
ATOM 2 P G B 15 32.622 43.803 20.462 1.00 43.30 P
ATOM 3 OP1 G B 15 32.486 42.570 21.263 1.00 43.12 O
ATOM 4 OP2 G B 15 32.088 45.082 20.992 1.00 42.79 O
ATOM 5 O5' G B 15 34.164 43.993 20.163 1.00 42.36 O
ATOM 6 C5' G B 15 34.924 42.898 19.672 1.00 42.82 C
ATOM 7 C4' G B 15 36.325 43.338 19.358 1.00 42.97 C
ATOM 8 O4' G B 15 36.262 44.347 18.312 1.00 42.33 O
ATOM 9 C3' G B 15 37.118 44.003 20.479 1.00 42.77 C
ATOM 10 O3' G B 15 37.739 43.092 21.392 1.00 43.23 O
ATOM 11 C2' G B 15 38.148 44.801 19.683 1.00 42.74 C
ATOM 12 O2' G B 15 39.218 44.006 19.216 1.00 44.54 O
ATOM 13 C1' G B 15 37.328 45.256 18.476 1.00 40.46 C
ATOM 14 N9 G B 15 36.801 46.589 18.721 1.00 37.77 N
ATOM 15 C8 G B 15 35.528 46.967 19.062 1.00 38.57 C
ATOM 16 N7 G B 15 35.411 48.263 19.238 1.00 38.34 N
ATOM 17 C5 G B 15 36.686 48.752 18.995 1.00 37.49 C
ATOM 18 C6 G B 15 37.186 50.071 19.021 1.00 37.65 C
ATOM 19 O6 G B 15 36.593 51.104 19.263 1.00 40.68 O
ATOM 20 N1 G B 15 38.531 50.117 18.716 1.00 37.82 N
ATOM 21 C2 G B 15 39.306 49.027 18.411 1.00 37.92 C
ATOM 22 N2 G B 15 40.583 49.271 18.148 1.00 36.69 N
ATOM 23 N3 G B 15 38.856 47.791 18.370 1.00 37.06 N
ATOM 24 C4 G B 15 37.547 47.729 18.672 1.00 37.77 C
ATOM 25 P C B 16 37.853 43.477 22.964 1.00 47.35 P
ATOM 26 OP1 C B 16 38.022 42.228 23.755 1.00 44.59 O
ATOM 27 OP2 C B 16 36.741 44.403 23.311 1.00 44.36 O
ATOM 28 O5' C B 16 39.182 44.343 23.087 1.00 41.35 O
TER
Atoms:
OP1: (45.457,47.872,16.604)
OP2: (43.227,46.701,17.131)
C3': (46.753,43.153,16.689)
C1': (46.260,42.105,18.716)
C5': (46.840,45.450,17.698)
O4': (46.716,43.410,19.008)
C8: (44.035,43.238,19.001)
O2': (47.880,41.043,17.342)
C6: (41.709,40.659,19.455)
C5: (42.744,41.574,19.247)
C4: (43.988,41.057,18.974)
P: (44.664,46.923,17.422)
C4': (47.271,44.008,17.817)
C2': (46.662,41.764,17.294)
C2: (43.260,38.996,19.089)
N1: (42.005,39.346,19.368)
N3: (44.320,39.765,18.876)
N6: (40.453,41.017,19.735)
N7: (42.784,42.959,19.254)
N9: (44.821,42.133,18.864)
O5': (45.431,45.523,17.412)
O3': (47.618,43.231,15.608)
OP2: (43.227,46.701,17.131)
C3': (46.753,43.153,16.689)
C1': (46.260,42.105,18.716)
C5': (46.840,45.450,17.698)
O4': (46.716,43.410,19.008)
C8: (44.035,43.238,19.001)
O2': (47.880,41.043,17.342)
C6: (41.709,40.659,19.455)
C5: (42.744,41.574,19.247)
C4: (43.988,41.057,18.974)
P: (44.664,46.923,17.422)
C4': (47.271,44.008,17.817)
C2': (46.662,41.764,17.294)
C2: (43.260,38.996,19.089)
N1: (42.005,39.346,19.368)
N3: (44.320,39.765,18.876)
N6: (40.453,41.017,19.735)
N7: (42.784,42.959,19.254)
N9: (44.821,42.133,18.864)
O5': (45.431,45.523,17.412)
O3': (47.618,43.231,15.608)
OP1: (32.486,42.570,21.263)
OP2: (32.088,45.082,20.992)
C3': (37.118,44.003,20.479)
C1': (37.328,45.256,18.476)
C5': (34.924,42.898,19.672)
O6: (36.593,51.104,19.263)
O4': (36.262,44.347,18.312)
C8: (35.528,46.967,19.062)
C2: (39.306,49.027,18.411)
C6: (37.186,50.071,19.021)
C5: (36.686,48.752,18.995)
C4: (37.547,47.729,18.672)
P: (32.622,43.803,20.462)
C4': (36.325,43.338,19.358)
C2': (38.148,44.801,19.683)
O2': (39.218,44.006,19.216)
N1: (38.531,50.117,18.716)
N2: (40.583,49.271,18.148)
N3: (38.856,47.791,18.370)
N7: (35.411,48.263,19.238)
N9: (36.801,46.589,18.721)
O5': (34.164,43.993,20.163)
O3': (37.739,43.092,21.392)
OP2: (32.088,45.082,20.992)
C3': (37.118,44.003,20.479)
C1': (37.328,45.256,18.476)
C5': (34.924,42.898,19.672)
O6: (36.593,51.104,19.263)
O4': (36.262,44.347,18.312)
C8: (35.528,46.967,19.062)
C2: (39.306,49.027,18.411)
C6: (37.186,50.071,19.021)
C5: (36.686,48.752,18.995)
C4: (37.547,47.729,18.672)
P: (32.622,43.803,20.462)
C4': (36.325,43.338,19.358)
C2': (38.148,44.801,19.683)
O2': (39.218,44.006,19.216)
N1: (38.531,50.117,18.716)
N2: (40.583,49.271,18.148)
N3: (38.856,47.791,18.370)
N7: (35.411,48.263,19.238)
N9: (36.801,46.589,18.721)
O5': (34.164,43.993,20.163)
O3': (37.739,43.092,21.392)
Image (generated by PyMOL):