Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01016:01014
Extra
PDB:
ATOM 1 O3' U A1015 62.767 91.960 116.145 1.00 40.77 O
ATOM 2 P A A1016 61.850 91.682 114.862 1.00 41.47 P
ATOM 3 OP1 A A1016 60.896 90.607 115.239 1.00 40.19 O
ATOM 4 OP2 A A1016 62.743 91.497 113.703 1.00 41.05 O
ATOM 5 O5' A A1016 61.052 93.042 114.634 1.00 39.44 O
ATOM 6 C5' A A1016 60.074 93.488 115.584 1.00 38.91 C
ATOM 7 C4' A A1016 59.891 94.984 115.483 1.00 38.24 C
ATOM 8 O4' A A1016 61.202 95.592 115.455 1.00 38.73 O
ATOM 9 C3' A A1016 59.185 95.513 114.246 1.00 37.49 C
ATOM 10 O3' A A1016 57.775 95.544 114.493 1.00 38.15 O
ATOM 11 C2' A A1016 59.743 96.926 114.151 1.00 38.31 C
ATOM 12 O2' A A1016 59.138 97.778 115.099 1.00 43.07 O
ATOM 13 C1' A A1016 61.188 96.722 114.611 1.00 37.18 C
ATOM 14 N9 A A1016 62.169 96.502 113.551 1.00 34.18 N
ATOM 15 C8 A A1016 62.596 95.303 113.042 1.00 33.41 C
ATOM 16 N7 A A1016 63.492 95.420 112.097 1.00 33.14 N
ATOM 17 C5 A A1016 63.673 96.790 111.977 1.00 33.30 C
ATOM 18 C6 A A1016 64.501 97.571 111.142 1.00 32.65 C
ATOM 19 N6 A A1016 65.351 97.061 110.246 1.00 31.94 N
ATOM 20 N1 A A1016 64.425 98.910 111.265 1.00 31.04 N
ATOM 21 C2 A A1016 63.584 99.421 112.171 1.00 32.01 C
ATOM 22 N3 A A1016 62.767 98.796 113.015 1.00 32.20 N
ATOM 23 C4 A A1016 62.859 97.467 112.865 1.00 32.74 C
ATOM 24 P A A1017 56.730 95.092 113.348 1.00 41.23 P
ATOM 25 OP1 A A1017 55.437 94.859 114.023 1.00 40.52 O
ATOM 26 OP2 A A1017 57.306 94.018 112.499 1.00 39.68 O
ATOM 27 O5' A A1017 56.572 96.388 112.440 1.00 40.54 O
TER
ATOM 1 O3' G B1013 66.719 86.917 108.613 1.00 43.12 O
ATOM 2 P G B1014 66.941 87.107 110.191 1.00 42.58 P
ATOM 3 OP1 G B1014 68.374 86.913 110.483 1.00 46.12 O
ATOM 4 OP2 G B1014 65.940 86.276 110.898 1.00 42.52 O
ATOM 5 O5' G B1014 66.579 88.635 110.437 1.00 41.79 O
ATOM 6 C5' G B1014 67.360 89.693 109.862 1.00 38.36 C
ATOM 7 C4' G B1014 66.655 91.017 110.055 1.00 40.27 C
ATOM 8 O4' G B1014 65.437 91.034 109.267 1.00 41.32 O
ATOM 9 C3' G B1014 66.176 91.336 111.465 1.00 40.50 C
ATOM 10 O3' G B1014 67.205 91.875 112.284 1.00 42.89 O
ATOM 11 C2' G B1014 65.088 92.363 111.198 1.00 39.70 C
ATOM 12 O2' G B1014 65.619 93.644 110.925 1.00 39.49 O
ATOM 13 C1' G B1014 64.433 91.775 109.947 1.00 38.89 C
ATOM 14 N9 G B1014 63.373 90.851 110.323 1.00 38.91 N
ATOM 15 C8 G B1014 63.481 89.491 110.461 1.00 40.17 C
ATOM 16 N7 G B1014 62.394 88.937 110.912 1.00 40.98 N
ATOM 17 C5 G B1014 61.509 89.994 111.064 1.00 40.70 C
ATOM 18 C6 G B1014 60.191 90.014 111.556 1.00 41.54 C
ATOM 19 O6 G B1014 59.519 89.074 111.995 1.00 45.65 O
ATOM 20 N1 G B1014 59.656 91.291 111.523 1.00 40.25 N
ATOM 21 C2 G B1014 60.310 92.403 111.089 1.00 39.55 C
ATOM 22 N2 G B1014 59.613 93.542 111.116 1.00 40.98 N
ATOM 23 N3 G B1014 61.551 92.403 110.657 1.00 39.92 N
ATOM 24 C4 G B1014 62.087 91.174 110.671 1.00 39.22 C
ATOM 25 P U B1015 67.428 91.307 113.771 1.00 44.25 P
ATOM 26 OP1 U B1015 68.755 91.788 114.212 1.00 45.30 O
ATOM 27 OP2 U B1015 67.143 89.856 113.783 1.00 40.30 O
ATOM 28 O5' U B1015 66.317 92.020 114.667 1.00 40.87 O
TER
ATOM 2 P A A1016 61.850 91.682 114.862 1.00 41.47 P
ATOM 3 OP1 A A1016 60.896 90.607 115.239 1.00 40.19 O
ATOM 4 OP2 A A1016 62.743 91.497 113.703 1.00 41.05 O
ATOM 5 O5' A A1016 61.052 93.042 114.634 1.00 39.44 O
ATOM 6 C5' A A1016 60.074 93.488 115.584 1.00 38.91 C
ATOM 7 C4' A A1016 59.891 94.984 115.483 1.00 38.24 C
ATOM 8 O4' A A1016 61.202 95.592 115.455 1.00 38.73 O
ATOM 9 C3' A A1016 59.185 95.513 114.246 1.00 37.49 C
ATOM 10 O3' A A1016 57.775 95.544 114.493 1.00 38.15 O
ATOM 11 C2' A A1016 59.743 96.926 114.151 1.00 38.31 C
ATOM 12 O2' A A1016 59.138 97.778 115.099 1.00 43.07 O
ATOM 13 C1' A A1016 61.188 96.722 114.611 1.00 37.18 C
ATOM 14 N9 A A1016 62.169 96.502 113.551 1.00 34.18 N
ATOM 15 C8 A A1016 62.596 95.303 113.042 1.00 33.41 C
ATOM 16 N7 A A1016 63.492 95.420 112.097 1.00 33.14 N
ATOM 17 C5 A A1016 63.673 96.790 111.977 1.00 33.30 C
ATOM 18 C6 A A1016 64.501 97.571 111.142 1.00 32.65 C
ATOM 19 N6 A A1016 65.351 97.061 110.246 1.00 31.94 N
ATOM 20 N1 A A1016 64.425 98.910 111.265 1.00 31.04 N
ATOM 21 C2 A A1016 63.584 99.421 112.171 1.00 32.01 C
ATOM 22 N3 A A1016 62.767 98.796 113.015 1.00 32.20 N
ATOM 23 C4 A A1016 62.859 97.467 112.865 1.00 32.74 C
ATOM 24 P A A1017 56.730 95.092 113.348 1.00 41.23 P
ATOM 25 OP1 A A1017 55.437 94.859 114.023 1.00 40.52 O
ATOM 26 OP2 A A1017 57.306 94.018 112.499 1.00 39.68 O
ATOM 27 O5' A A1017 56.572 96.388 112.440 1.00 40.54 O
TER
ATOM 1 O3' G B1013 66.719 86.917 108.613 1.00 43.12 O
ATOM 2 P G B1014 66.941 87.107 110.191 1.00 42.58 P
ATOM 3 OP1 G B1014 68.374 86.913 110.483 1.00 46.12 O
ATOM 4 OP2 G B1014 65.940 86.276 110.898 1.00 42.52 O
ATOM 5 O5' G B1014 66.579 88.635 110.437 1.00 41.79 O
ATOM 6 C5' G B1014 67.360 89.693 109.862 1.00 38.36 C
ATOM 7 C4' G B1014 66.655 91.017 110.055 1.00 40.27 C
ATOM 8 O4' G B1014 65.437 91.034 109.267 1.00 41.32 O
ATOM 9 C3' G B1014 66.176 91.336 111.465 1.00 40.50 C
ATOM 10 O3' G B1014 67.205 91.875 112.284 1.00 42.89 O
ATOM 11 C2' G B1014 65.088 92.363 111.198 1.00 39.70 C
ATOM 12 O2' G B1014 65.619 93.644 110.925 1.00 39.49 O
ATOM 13 C1' G B1014 64.433 91.775 109.947 1.00 38.89 C
ATOM 14 N9 G B1014 63.373 90.851 110.323 1.00 38.91 N
ATOM 15 C8 G B1014 63.481 89.491 110.461 1.00 40.17 C
ATOM 16 N7 G B1014 62.394 88.937 110.912 1.00 40.98 N
ATOM 17 C5 G B1014 61.509 89.994 111.064 1.00 40.70 C
ATOM 18 C6 G B1014 60.191 90.014 111.556 1.00 41.54 C
ATOM 19 O6 G B1014 59.519 89.074 111.995 1.00 45.65 O
ATOM 20 N1 G B1014 59.656 91.291 111.523 1.00 40.25 N
ATOM 21 C2 G B1014 60.310 92.403 111.089 1.00 39.55 C
ATOM 22 N2 G B1014 59.613 93.542 111.116 1.00 40.98 N
ATOM 23 N3 G B1014 61.551 92.403 110.657 1.00 39.92 N
ATOM 24 C4 G B1014 62.087 91.174 110.671 1.00 39.22 C
ATOM 25 P U B1015 67.428 91.307 113.771 1.00 44.25 P
ATOM 26 OP1 U B1015 68.755 91.788 114.212 1.00 45.30 O
ATOM 27 OP2 U B1015 67.143 89.856 113.783 1.00 40.30 O
ATOM 28 O5' U B1015 66.317 92.020 114.667 1.00 40.87 O
TER
Atoms:
OP1: (60.896,90.607,115.239)
OP2: (62.743,91.497,113.703)
C3': (59.185,95.513,114.246)
C1': (61.188,96.722,114.611)
C5': (60.074,93.488,115.584)
O4': (61.202,95.592,115.455)
C8: (62.596,95.303,113.042)
O2': (59.138,97.778,115.099)
C6: (64.501,97.571,111.142)
C5: (63.673,96.790,111.977)
C4: (62.859,97.467,112.865)
P: (61.850,91.682,114.862)
C4': (59.891,94.984,115.483)
C2': (59.743,96.926,114.151)
C2: (63.584,99.421,112.171)
N1: (64.425,98.910,111.265)
N3: (62.767,98.796,113.015)
N6: (65.351,97.061,110.246)
N7: (63.492,95.420,112.097)
N9: (62.169,96.502,113.551)
O5': (61.052,93.042,114.634)
O3': (57.775,95.544,114.493)
OP2: (62.743,91.497,113.703)
C3': (59.185,95.513,114.246)
C1': (61.188,96.722,114.611)
C5': (60.074,93.488,115.584)
O4': (61.202,95.592,115.455)
C8: (62.596,95.303,113.042)
O2': (59.138,97.778,115.099)
C6: (64.501,97.571,111.142)
C5: (63.673,96.790,111.977)
C4: (62.859,97.467,112.865)
P: (61.850,91.682,114.862)
C4': (59.891,94.984,115.483)
C2': (59.743,96.926,114.151)
C2: (63.584,99.421,112.171)
N1: (64.425,98.910,111.265)
N3: (62.767,98.796,113.015)
N6: (65.351,97.061,110.246)
N7: (63.492,95.420,112.097)
N9: (62.169,96.502,113.551)
O5': (61.052,93.042,114.634)
O3': (57.775,95.544,114.493)
OP1: (68.374,86.913,110.483)
OP2: (65.940,86.276,110.898)
C3': (66.176,91.336,111.465)
C1': (64.433,91.775,109.947)
C5': (67.360,89.693,109.862)
O6: (59.519,89.074,111.995)
O4': (65.437,91.034,109.267)
C8: (63.481,89.491,110.461)
C2: (60.310,92.403,111.089)
C6: (60.191,90.014,111.556)
C5: (61.509,89.994,111.064)
C4: (62.087,91.174,110.671)
P: (66.941,87.107,110.191)
C4': (66.655,91.017,110.055)
C2': (65.088,92.363,111.198)
O2': (65.619,93.644,110.925)
N1: (59.656,91.291,111.523)
N2: (59.613,93.542,111.116)
N3: (61.551,92.403,110.657)
N7: (62.394,88.937,110.912)
N9: (63.373,90.851,110.323)
O5': (66.579,88.635,110.437)
O3': (67.205,91.875,112.284)
OP2: (65.940,86.276,110.898)
C3': (66.176,91.336,111.465)
C1': (64.433,91.775,109.947)
C5': (67.360,89.693,109.862)
O6: (59.519,89.074,111.995)
O4': (65.437,91.034,109.267)
C8: (63.481,89.491,110.461)
C2: (60.310,92.403,111.089)
C6: (60.191,90.014,111.556)
C5: (61.509,89.994,111.064)
C4: (62.087,91.174,110.671)
P: (66.941,87.107,110.191)
C4': (66.655,91.017,110.055)
C2': (65.088,92.363,111.198)
O2': (65.619,93.644,110.925)
N1: (59.656,91.291,111.523)
N2: (59.613,93.542,111.116)
N3: (61.551,92.403,110.657)
N7: (62.394,88.937,110.912)
N9: (63.373,90.851,110.323)
O5': (66.579,88.635,110.437)
O3': (67.205,91.875,112.284)
Image (generated by PyMOL):