ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0186:0404

Extra

PDB:
ATOM 1 O3' C A 185 63.506 81.484 25.044 1.00 59.45 O
ATOM 2 P A A 186 63.042 80.320 24.022 1.00 63.45 P
ATOM 3 OP1 A A 186 61.693 80.661 23.474 1.00 61.24 O
ATOM 4 OP2 A A 186 63.246 79.031 24.746 1.00 63.05 O
ATOM 5 O5' A A 186 64.062 80.373 22.796 1.00 60.55 O
ATOM 6 C5' A A 186 65.356 80.974 22.920 1.00 60.44 C
ATOM 7 C4' A A 186 66.361 80.209 22.103 1.00 59.39 C
ATOM 8 O4' A A 186 67.538 81.036 21.883 1.00 60.39 O
ATOM 9 C3' A A 186 66.861 78.909 22.726 1.00 59.20 C
ATOM 10 O3' A A 186 67.174 77.987 21.683 1.00 60.70 O
ATOM 11 C2' A A 186 68.168 79.354 23.376 1.00 59.70 C
ATOM 12 O2' A A 186 69.089 78.299 23.578 1.00 58.55 O
ATOM 13 C1' A A 186 68.682 80.336 22.322 1.00 60.62 C
ATOM 14 N9 A A 186 69.704 81.298 22.744 1.00 59.95 N
ATOM 15 C8 A A 186 69.655 82.223 23.755 1.00 59.24 C
ATOM 16 N7 A A 186 70.754 82.927 23.878 1.00 59.42 N
ATOM 17 C5 A A 186 71.580 82.436 22.880 1.00 58.98 C
ATOM 18 C6 A A 186 72.891 82.767 22.485 1.00 60.11 C
ATOM 19 N6 A A 186 73.630 83.715 23.074 1.00 60.53 N
ATOM 20 N1 A A 186 73.423 82.084 21.449 1.00 59.53 N
ATOM 21 C2 A A 186 72.680 81.142 20.856 1.00 59.27 C
ATOM 22 N3 A A 186 71.443 80.744 21.133 1.00 58.74 N
ATOM 23 C4 A A 186 70.944 81.437 22.169 1.00 58.84 C
ATOM 24 P A A 187 66.089 76.901 21.207 1.00 60.96 P
ATOM 25 OP1 A A 187 64.930 76.895 22.133 1.00 61.75 O
ATOM 26 OP2 A A 187 66.852 75.652 20.985 1.00 60.38 O
ATOM 27 O5' A A 187 65.564 77.464 19.813 1.00 60.58 O
TER

ATOM 1 O3' A B 403 79.127 90.363 26.315 1.00 45.32 O
ATOM 2 P G B 404 78.952 89.165 27.365 1.00 45.25 P
ATOM 3 OP1 G B 404 78.432 89.771 28.626 1.00 44.33 O
ATOM 4 OP2 G B 404 80.221 88.382 27.378 1.00 42.17 O
ATOM 5 O5' G B 404 77.801 88.264 26.743 1.00 45.98 O
ATOM 6 C5' G B 404 76.462 88.764 26.623 1.00 48.41 C
ATOM 7 C4' G B 404 75.574 87.713 26.012 1.00 49.30 C
ATOM 8 O4' G B 404 75.963 87.472 24.637 1.00 49.54 O
ATOM 9 C3' G B 404 75.658 86.363 26.694 1.00 49.47 C
ATOM 10 O3' G B 404 74.756 86.374 27.803 1.00 49.77 O
ATOM 11 C2' G B 404 75.251 85.399 25.574 1.00 49.82 C
ATOM 12 O2' G B 404 73.852 85.275 25.385 1.00 50.23 O
ATOM 13 C1' G B 404 75.834 86.096 24.338 1.00 49.29 C
ATOM 14 N9 G B 404 77.135 85.609 23.894 1.00 50.05 N
ATOM 15 C8 G B 404 78.372 86.031 24.323 1.00 49.52 C
ATOM 16 N7 G B 404 79.357 85.406 23.741 1.00 48.56 N
ATOM 17 C5 G B 404 78.737 84.517 22.874 1.00 49.14 C
ATOM 18 C6 G B 404 79.294 83.563 21.982 1.00 49.12 C
ATOM 19 O6 G B 404 80.489 83.310 21.767 1.00 48.40 O
ATOM 20 N1 G B 404 78.303 82.862 21.305 1.00 49.28 N
ATOM 21 C2 G B 404 76.951 83.049 21.466 1.00 50.44 C
ATOM 22 N2 G B 404 76.154 82.250 20.750 1.00 51.38 N
ATOM 23 N3 G B 404 76.419 83.946 22.281 1.00 49.90 N
ATOM 24 C4 G B 404 77.364 84.634 22.953 1.00 49.79 C
ATOM 25 P G B 405 75.255 85.925 29.261 1.00 49.84 P
ATOM 26 OP1 G B 405 76.278 84.856 29.117 1.00 50.67 O
ATOM 27 OP2 G B 405 74.026 85.678 30.048 1.00 50.22 O
ATOM 28 O5' G B 405 75.953 87.199 29.893 1.00 48.15 O
TER

Atoms:
OP1: (61.693,80.661,23.474)
OP2: (63.246,79.031,24.746)
C3': (66.861,78.909,22.726)
C1': (68.682,80.336,22.322)
C5': (65.356,80.974,22.920)
O4': (67.538,81.036,21.883)
C8: (69.655,82.223,23.755)
O2': (69.089,78.299,23.578)
C6: (72.891,82.767,22.485)
C5: (71.580,82.436,22.880)
C4: (70.944,81.437,22.169)
P: (63.042,80.320,24.022)
C4': (66.361,80.209,22.103)
C2': (68.168,79.354,23.376)
C2: (72.680,81.142,20.856)
N1: (73.423,82.084,21.449)
N3: (71.443,80.744,21.133)
N6: (73.630,83.715,23.074)
N7: (70.754,82.927,23.878)
N9: (69.704,81.298,22.744)
O5': (64.062,80.373,22.796)
O3': (67.174,77.987,21.683)
OP1: (78.432,89.771,28.626)
OP2: (80.221,88.382,27.378)
C3': (75.658,86.363,26.694)
C1': (75.834,86.096,24.338)
C5': (76.462,88.764,26.623)
O6: (80.489,83.310,21.767)
O4': (75.963,87.472,24.637)
C8: (78.372,86.031,24.323)
C2: (76.951,83.049,21.466)
C6: (79.294,83.563,21.982)
C5: (78.737,84.517,22.874)
C4: (77.364,84.634,22.953)
P: (78.952,89.165,27.365)
C4': (75.574,87.713,26.012)
C2': (75.251,85.399,25.574)
O2': (73.852,85.275,25.385)
N1: (78.303,82.862,21.305)
N2: (76.154,82.250,20.750)
N3: (76.419,83.946,22.281)
N7: (79.357,85.406,23.741)
N9: (77.135,85.609,23.894)
O5': (77.801,88.264,26.743)
O3': (74.756,86.374,27.803)
Image (generated by PyMOL):
PyMOL image
show in jmol