Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0472:0470
Extra
PDB:
ATOM 1 O3' C A 471 20.940 150.708 46.832 1.00 50.34 O
ATOM 2 P A A 472 22.237 151.492 47.337 1.00 50.11 P
ATOM 3 OP1 A A 472 23.402 150.924 46.619 1.00 51.34 O
ATOM 4 OP2 A A 472 22.217 151.488 48.818 1.00 51.23 O
ATOM 5 O5' A A 472 22.004 152.987 46.844 1.00 47.97 O
ATOM 6 C5' A A 472 21.714 153.288 45.464 1.00 44.79 C
ATOM 7 C4' A A 472 21.012 154.619 45.372 1.00 43.09 C
ATOM 8 O4' A A 472 19.749 154.524 46.070 1.00 41.24 O
ATOM 9 C3' A A 472 21.761 155.754 46.045 1.00 42.72 C
ATOM 10 O3' A A 472 22.654 156.351 45.094 1.00 45.30 O
ATOM 11 C2' A A 472 20.641 156.693 46.485 1.00 41.39 C
ATOM 12 O2' A A 472 20.217 157.578 45.477 1.00 41.03 O
ATOM 13 C1' A A 472 19.501 155.716 46.782 1.00 41.26 C
ATOM 14 N9 A A 472 19.307 155.375 48.190 1.00 42.74 N
ATOM 15 C8 A A 472 20.058 154.528 48.965 1.00 44.60 C
ATOM 16 N7 A A 472 19.641 154.434 50.205 1.00 44.93 N
ATOM 17 C5 A A 472 18.540 155.275 50.251 1.00 43.99 C
ATOM 18 C6 A A 472 17.653 155.620 51.288 1.00 42.92 C
ATOM 19 N6 A A 472 17.738 155.147 52.529 1.00 40.73 N
ATOM 20 N1 A A 472 16.658 156.478 50.999 1.00 43.69 N
ATOM 21 C2 A A 472 16.563 156.950 49.751 1.00 45.32 C
ATOM 22 N3 A A 472 17.331 156.703 48.692 1.00 44.95 N
ATOM 23 C4 A A 472 18.316 155.851 49.013 1.00 43.70 C
ATOM 24 P A A 473 24.120 156.848 45.545 1.00 46.10 P
ATOM 25 OP1 A A 473 24.732 157.568 44.395 1.00 44.19 O
ATOM 26 OP2 A A 473 24.825 155.685 46.135 1.00 44.81 O
ATOM 27 O5' A A 473 23.829 157.933 46.677 1.00 44.55 O
TER
ATOM 1 O3' U B 469 24.522 149.213 56.203 1.00 43.84 O
ATOM 2 P G B 470 23.840 148.195 55.172 1.00 43.77 P
ATOM 3 OP1 G B 470 22.955 147.280 55.922 1.00 42.13 O
ATOM 4 OP2 G B 470 24.897 147.640 54.288 1.00 42.09 O
ATOM 5 O5' G B 470 22.918 149.149 54.300 1.00 45.45 O
ATOM 6 C5' G B 470 21.925 149.967 54.928 1.00 46.06 C
ATOM 7 C4' G B 470 21.366 150.970 53.951 1.00 47.92 C
ATOM 8 O4' G B 470 22.295 152.064 53.750 1.00 49.37 O
ATOM 9 C3' G B 470 21.116 150.495 52.534 1.00 48.20 C
ATOM 10 O3' G B 470 19.970 149.669 52.429 1.00 48.50 O
ATOM 11 C2' G B 470 20.953 151.822 51.811 1.00 49.56 C
ATOM 12 O2' G B 470 19.693 152.413 52.045 1.00 50.64 O
ATOM 13 C1' G B 470 22.035 152.666 52.493 1.00 50.94 C
ATOM 14 N9 G B 470 23.260 152.673 51.702 1.00 53.00 N
ATOM 15 C8 G B 470 24.252 151.723 51.685 1.00 53.40 C
ATOM 16 N7 G B 470 25.170 151.957 50.785 1.00 54.32 N
ATOM 17 C5 G B 470 24.772 153.146 50.187 1.00 55.18 C
ATOM 18 C6 G B 470 25.361 153.890 49.127 1.00 55.53 C
ATOM 19 O6 G B 470 26.379 153.627 48.472 1.00 56.73 O
ATOM 20 N1 G B 470 24.636 155.048 48.849 1.00 55.63 N
ATOM 21 C2 G B 470 23.494 155.445 49.501 1.00 54.91 C
ATOM 22 N2 G B 470 22.953 156.609 49.104 1.00 53.00 N
ATOM 23 N3 G B 470 22.926 154.753 50.477 1.00 55.68 N
ATOM 24 C4 G B 470 23.613 153.620 50.765 1.00 55.23 C
ATOM 25 P C B 471 19.944 148.489 51.338 1.00 51.33 P
ATOM 26 OP1 C B 471 18.833 147.566 51.690 1.00 50.12 O
ATOM 27 OP2 C B 471 21.318 147.950 51.180 1.00 51.09 O
ATOM 28 O5' C B 471 19.592 149.250 49.982 1.00 52.92 O
TER
ATOM 2 P A A 472 22.237 151.492 47.337 1.00 50.11 P
ATOM 3 OP1 A A 472 23.402 150.924 46.619 1.00 51.34 O
ATOM 4 OP2 A A 472 22.217 151.488 48.818 1.00 51.23 O
ATOM 5 O5' A A 472 22.004 152.987 46.844 1.00 47.97 O
ATOM 6 C5' A A 472 21.714 153.288 45.464 1.00 44.79 C
ATOM 7 C4' A A 472 21.012 154.619 45.372 1.00 43.09 C
ATOM 8 O4' A A 472 19.749 154.524 46.070 1.00 41.24 O
ATOM 9 C3' A A 472 21.761 155.754 46.045 1.00 42.72 C
ATOM 10 O3' A A 472 22.654 156.351 45.094 1.00 45.30 O
ATOM 11 C2' A A 472 20.641 156.693 46.485 1.00 41.39 C
ATOM 12 O2' A A 472 20.217 157.578 45.477 1.00 41.03 O
ATOM 13 C1' A A 472 19.501 155.716 46.782 1.00 41.26 C
ATOM 14 N9 A A 472 19.307 155.375 48.190 1.00 42.74 N
ATOM 15 C8 A A 472 20.058 154.528 48.965 1.00 44.60 C
ATOM 16 N7 A A 472 19.641 154.434 50.205 1.00 44.93 N
ATOM 17 C5 A A 472 18.540 155.275 50.251 1.00 43.99 C
ATOM 18 C6 A A 472 17.653 155.620 51.288 1.00 42.92 C
ATOM 19 N6 A A 472 17.738 155.147 52.529 1.00 40.73 N
ATOM 20 N1 A A 472 16.658 156.478 50.999 1.00 43.69 N
ATOM 21 C2 A A 472 16.563 156.950 49.751 1.00 45.32 C
ATOM 22 N3 A A 472 17.331 156.703 48.692 1.00 44.95 N
ATOM 23 C4 A A 472 18.316 155.851 49.013 1.00 43.70 C
ATOM 24 P A A 473 24.120 156.848 45.545 1.00 46.10 P
ATOM 25 OP1 A A 473 24.732 157.568 44.395 1.00 44.19 O
ATOM 26 OP2 A A 473 24.825 155.685 46.135 1.00 44.81 O
ATOM 27 O5' A A 473 23.829 157.933 46.677 1.00 44.55 O
TER
ATOM 1 O3' U B 469 24.522 149.213 56.203 1.00 43.84 O
ATOM 2 P G B 470 23.840 148.195 55.172 1.00 43.77 P
ATOM 3 OP1 G B 470 22.955 147.280 55.922 1.00 42.13 O
ATOM 4 OP2 G B 470 24.897 147.640 54.288 1.00 42.09 O
ATOM 5 O5' G B 470 22.918 149.149 54.300 1.00 45.45 O
ATOM 6 C5' G B 470 21.925 149.967 54.928 1.00 46.06 C
ATOM 7 C4' G B 470 21.366 150.970 53.951 1.00 47.92 C
ATOM 8 O4' G B 470 22.295 152.064 53.750 1.00 49.37 O
ATOM 9 C3' G B 470 21.116 150.495 52.534 1.00 48.20 C
ATOM 10 O3' G B 470 19.970 149.669 52.429 1.00 48.50 O
ATOM 11 C2' G B 470 20.953 151.822 51.811 1.00 49.56 C
ATOM 12 O2' G B 470 19.693 152.413 52.045 1.00 50.64 O
ATOM 13 C1' G B 470 22.035 152.666 52.493 1.00 50.94 C
ATOM 14 N9 G B 470 23.260 152.673 51.702 1.00 53.00 N
ATOM 15 C8 G B 470 24.252 151.723 51.685 1.00 53.40 C
ATOM 16 N7 G B 470 25.170 151.957 50.785 1.00 54.32 N
ATOM 17 C5 G B 470 24.772 153.146 50.187 1.00 55.18 C
ATOM 18 C6 G B 470 25.361 153.890 49.127 1.00 55.53 C
ATOM 19 O6 G B 470 26.379 153.627 48.472 1.00 56.73 O
ATOM 20 N1 G B 470 24.636 155.048 48.849 1.00 55.63 N
ATOM 21 C2 G B 470 23.494 155.445 49.501 1.00 54.91 C
ATOM 22 N2 G B 470 22.953 156.609 49.104 1.00 53.00 N
ATOM 23 N3 G B 470 22.926 154.753 50.477 1.00 55.68 N
ATOM 24 C4 G B 470 23.613 153.620 50.765 1.00 55.23 C
ATOM 25 P C B 471 19.944 148.489 51.338 1.00 51.33 P
ATOM 26 OP1 C B 471 18.833 147.566 51.690 1.00 50.12 O
ATOM 27 OP2 C B 471 21.318 147.950 51.180 1.00 51.09 O
ATOM 28 O5' C B 471 19.592 149.250 49.982 1.00 52.92 O
TER
Atoms:
OP1: (23.402,150.924,46.619)
OP2: (22.217,151.488,48.818)
C3': (21.761,155.754,46.045)
C1': (19.501,155.716,46.782)
C5': (21.714,153.288,45.464)
O4': (19.749,154.524,46.070)
C8: (20.058,154.528,48.965)
O2': (20.217,157.578,45.477)
C6: (17.653,155.620,51.288)
C5: (18.540,155.275,50.251)
C4: (18.316,155.851,49.013)
P: (22.237,151.492,47.337)
C4': (21.012,154.619,45.372)
C2': (20.641,156.693,46.485)
C2: (16.563,156.950,49.751)
N1: (16.658,156.478,50.999)
N3: (17.331,156.703,48.692)
N6: (17.738,155.147,52.529)
N7: (19.641,154.434,50.205)
N9: (19.307,155.375,48.190)
O5': (22.004,152.987,46.844)
O3': (22.654,156.351,45.094)
OP2: (22.217,151.488,48.818)
C3': (21.761,155.754,46.045)
C1': (19.501,155.716,46.782)
C5': (21.714,153.288,45.464)
O4': (19.749,154.524,46.070)
C8: (20.058,154.528,48.965)
O2': (20.217,157.578,45.477)
C6: (17.653,155.620,51.288)
C5: (18.540,155.275,50.251)
C4: (18.316,155.851,49.013)
P: (22.237,151.492,47.337)
C4': (21.012,154.619,45.372)
C2': (20.641,156.693,46.485)
C2: (16.563,156.950,49.751)
N1: (16.658,156.478,50.999)
N3: (17.331,156.703,48.692)
N6: (17.738,155.147,52.529)
N7: (19.641,154.434,50.205)
N9: (19.307,155.375,48.190)
O5': (22.004,152.987,46.844)
O3': (22.654,156.351,45.094)
OP1: (22.955,147.280,55.922)
OP2: (24.897,147.640,54.288)
C3': (21.116,150.495,52.534)
C1': (22.035,152.666,52.493)
C5': (21.925,149.967,54.928)
O6: (26.379,153.627,48.472)
O4': (22.295,152.064,53.750)
C8: (24.252,151.723,51.685)
C2: (23.494,155.445,49.501)
C6: (25.361,153.890,49.127)
C5: (24.772,153.146,50.187)
C4: (23.613,153.620,50.765)
P: (23.840,148.195,55.172)
C4': (21.366,150.970,53.951)
C2': (20.953,151.822,51.811)
O2': (19.693,152.413,52.045)
N1: (24.636,155.048,48.849)
N2: (22.953,156.609,49.104)
N3: (22.926,154.753,50.477)
N7: (25.170,151.957,50.785)
N9: (23.260,152.673,51.702)
O5': (22.918,149.149,54.300)
O3': (19.970,149.669,52.429)
OP2: (24.897,147.640,54.288)
C3': (21.116,150.495,52.534)
C1': (22.035,152.666,52.493)
C5': (21.925,149.967,54.928)
O6: (26.379,153.627,48.472)
O4': (22.295,152.064,53.750)
C8: (24.252,151.723,51.685)
C2: (23.494,155.445,49.501)
C6: (25.361,153.890,49.127)
C5: (24.772,153.146,50.187)
C4: (23.613,153.620,50.765)
P: (23.840,148.195,55.172)
C4': (21.366,150.970,53.951)
C2': (20.953,151.822,51.811)
O2': (19.693,152.413,52.045)
N1: (24.636,155.048,48.849)
N2: (22.953,156.609,49.104)
N3: (22.926,154.753,50.477)
N7: (25.170,151.957,50.785)
N9: (23.260,152.673,51.702)
O5': (22.918,149.149,54.300)
O3': (19.970,149.669,52.429)
Image (generated by PyMOL):