ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MZP:B12:B10

Extra

PDB:
ATOM 1 O3' G A 11 1.676 66.714 19.104 1.00 54.66 O
ATOM 2 P A A 12 1.652 68.138 19.850 1.00 53.10 P
ATOM 3 OP1 A A 12 0.324 68.746 19.642 1.00 57.19 O
ATOM 4 OP2 A A 12 2.868 68.919 19.540 1.00 54.10 O
ATOM 5 O5' A A 12 1.751 67.722 21.373 1.00 54.05 O
ATOM 6 C5' A A 12 2.989 67.302 21.912 1.00 54.39 C
ATOM 7 C4' A A 12 3.126 65.796 21.837 1.00 52.63 C
ATOM 8 O4' A A 12 3.009 65.328 20.478 1.00 51.31 O
ATOM 9 C3' A A 12 4.472 65.319 22.355 1.00 52.15 C
ATOM 10 O3' A A 12 4.214 65.007 23.727 1.00 51.83 O
ATOM 11 C2' A A 12 4.800 64.107 21.489 1.00 51.73 C
ATOM 12 O2' A A 12 4.230 62.941 22.045 1.00 54.43 O
ATOM 13 C1' A A 12 4.049 64.415 20.192 1.00 50.18 C
ATOM 14 N9 A A 12 4.723 64.866 18.968 1.00 46.69 N
ATOM 15 C8 A A 12 4.669 66.132 18.439 1.00 46.36 C
ATOM 16 N7 A A 12 5.113 66.214 17.210 1.00 43.32 N
ATOM 17 C5 A A 12 5.549 64.929 16.929 1.00 43.70 C
ATOM 18 C6 A A 12 6.094 64.345 15.765 1.00 42.81 C
ATOM 19 N6 A A 12 6.223 64.983 14.598 1.00 39.74 N
ATOM 20 N1 A A 12 6.479 63.055 15.834 1.00 42.20 N
ATOM 21 C2 A A 12 6.292 62.394 16.980 1.00 43.21 C
ATOM 22 N3 A A 12 5.749 62.817 18.123 1.00 46.28 N
ATOM 23 C4 A A 12 5.390 64.108 18.032 1.00 45.23 C
ATOM 24 P U A 13 5.204 64.060 24.549 1.00 49.68 P
ATOM 25 OP1 U A 13 4.707 62.665 24.458 1.00 49.52 O
ATOM 26 OP2 U A 13 5.359 64.694 25.874 1.00 53.13 O
ATOM 27 O5' U A 13 6.583 64.186 23.761 1.00 53.30 O
TER

ATOM 1 O3' A B 9 5.954 74.801 16.348 1.00 40.93 O
ATOM 2 P G B 10 4.650 73.868 16.376 1.00 43.91 P
ATOM 3 OP1 G B 10 3.637 74.508 15.497 1.00 43.21 O
ATOM 4 OP2 G B 10 4.303 73.545 17.788 1.00 42.43 O
ATOM 5 O5' G B 10 5.130 72.507 15.705 1.00 45.71 O
ATOM 6 C5' G B 10 5.304 72.387 14.297 1.00 46.40 C
ATOM 7 C4' G B 10 5.678 70.969 13.961 1.00 48.70 C
ATOM 8 O4' G B 10 6.951 70.659 14.583 1.00 48.30 O
ATOM 9 C3' G B 10 4.722 69.916 14.502 1.00 51.11 C
ATOM 10 O3' G B 10 3.703 69.694 13.532 1.00 55.99 O
ATOM 11 C2' G B 10 5.619 68.688 14.608 1.00 49.04 C
ATOM 12 O2' G B 10 5.761 68.020 13.375 1.00 50.06 O
ATOM 13 C1' G B 10 6.962 69.306 15.004 1.00 47.50 C
ATOM 14 N9 G B 10 7.177 69.275 16.445 1.00 44.95 N
ATOM 15 C8 G B 10 6.882 70.272 17.341 1.00 43.81 C
ATOM 16 N7 G B 10 7.091 69.924 18.580 1.00 42.57 N
ATOM 17 C5 G B 10 7.568 68.624 18.497 1.00 41.52 C
ATOM 18 C6 G B 10 7.929 67.716 19.520 1.00 40.30 C
ATOM 19 O6 G B 10 7.881 67.878 20.741 1.00 41.51 O
ATOM 20 N1 G B 10 8.372 66.505 18.999 1.00 39.95 N
ATOM 21 C2 G B 10 8.452 66.202 17.664 1.00 40.72 C
ATOM 22 N2 G B 10 8.914 64.977 17.372 1.00 42.51 N
ATOM 23 N3 G B 10 8.105 67.037 16.693 1.00 40.24 N
ATOM 24 C4 G B 10 7.666 68.221 17.182 1.00 43.05 C
ATOM 25 P G B 11 2.178 69.433 13.981 1.00 59.18 P
ATOM 26 OP1 G B 11 1.846 68.032 13.598 1.00 57.59 O
ATOM 27 OP2 G B 11 1.370 70.566 13.446 1.00 57.81 O
ATOM 28 O5' G B 11 2.150 69.505 15.571 1.00 58.88 O
TER

Atoms:
OP1: (0.324,68.746,19.642)
OP2: (2.868,68.919,19.540)
C3': (4.472,65.319,22.355)
C1': (4.049,64.415,20.192)
C5': (2.989,67.302,21.912)
O4': (3.009,65.328,20.478)
C8: (4.669,66.132,18.439)
O2': (4.230,62.941,22.045)
C6: (6.094,64.345,15.765)
C5: (5.549,64.929,16.929)
C4: (5.390,64.108,18.032)
P: (1.652,68.138,19.850)
C4': (3.126,65.796,21.837)
C2': (4.800,64.107,21.489)
C2: (6.292,62.394,16.980)
N1: (6.479,63.055,15.834)
N3: (5.749,62.817,18.123)
N6: (6.223,64.983,14.598)
N7: (5.113,66.214,17.210)
N9: (4.723,64.866,18.968)
O5': (1.751,67.722,21.373)
O3': (4.214,65.007,23.727)
OP1: (3.637,74.508,15.497)
OP2: (4.303,73.545,17.788)
C3': (4.722,69.916,14.502)
C1': (6.962,69.306,15.004)
C5': (5.304,72.387,14.297)
O6: (7.881,67.878,20.741)
O4': (6.951,70.659,14.583)
C8: (6.882,70.272,17.341)
C2: (8.452,66.202,17.664)
C6: (7.929,67.716,19.520)
C5: (7.568,68.624,18.497)
C4: (7.666,68.221,17.182)
P: (4.650,73.868,16.376)
C4': (5.678,70.969,13.961)
C2': (5.619,68.688,14.608)
O2': (5.761,68.020,13.375)
N1: (8.372,66.505,18.999)
N2: (8.914,64.977,17.372)
N3: (8.105,67.037,16.693)
N7: (7.091,69.924,18.580)
N9: (7.177,69.275,16.445)
O5': (5.130,72.507,15.705)
O3': (3.703,69.694,13.532)
Image (generated by PyMOL):
PyMOL image
show in jmol