ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A681:A679

Extra

PDB:
ATOM 1 O3' A A 680 65.420 74.525 46.076 1.00 55.35 O
ATOM 2 P A A 681 64.414 74.095 44.915 1.00 55.30 P
ATOM 3 OP1 A A 681 63.846 75.321 44.272 1.00 54.10 O
ATOM 4 OP2 A A 681 63.505 73.137 45.590 1.00 54.46 O
ATOM 5 O5' A A 681 65.369 73.335 43.875 1.00 56.94 O
ATOM 6 C5' A A 681 66.416 74.064 43.162 1.00 59.14 C
ATOM 7 C4' A A 681 67.390 73.125 42.467 1.00 59.58 C
ATOM 8 O4' A A 681 68.031 72.286 43.454 1.00 60.04 O
ATOM 9 C3' A A 681 66.834 72.162 41.427 1.00 60.17 C
ATOM 10 O3' A A 681 66.695 72.803 40.150 1.00 61.41 O
ATOM 11 C2' A A 681 67.880 71.047 41.427 1.00 60.22 C
ATOM 12 O2' A A 681 69.049 71.298 40.669 1.00 61.03 O
ATOM 13 C1' A A 681 68.286 71.008 42.901 1.00 60.45 C
ATOM 14 N9 A A 681 67.541 70.017 43.674 1.00 61.57 N
ATOM 15 C8 A A 681 66.359 70.194 44.360 1.00 61.66 C
ATOM 16 N7 A A 681 65.916 69.106 44.945 1.00 62.06 N
ATOM 17 C5 A A 681 66.874 68.148 44.635 1.00 62.46 C
ATOM 18 C6 A A 681 66.989 66.786 44.966 1.00 62.46 C
ATOM 19 N6 A A 681 66.108 66.132 45.722 1.00 61.42 N
ATOM 20 N1 A A 681 68.057 66.112 44.493 1.00 63.41 N
ATOM 21 C2 A A 681 68.951 66.772 43.746 1.00 64.09 C
ATOM 22 N3 A A 681 68.965 68.052 43.374 1.00 63.38 N
ATOM 23 C4 A A 681 67.883 68.695 43.854 1.00 62.32 C
ATOM 24 P A A 682 65.634 72.247 39.062 1.00 62.73 P
ATOM 25 OP1 A A 682 65.728 73.196 37.902 1.00 62.64 O
ATOM 26 OP2 A A 682 64.310 72.015 39.688 1.00 62.47 O
ATOM 27 O5' A A 682 66.234 70.820 38.646 1.00 62.21 O
TER

ATOM 1 O3' G B 678 57.639 68.952 50.107 1.00 54.19 O
ATOM 2 P G B 679 58.771 70.025 50.527 1.00 55.05 P
ATOM 3 OP1 G B 679 59.281 69.774 51.903 1.00 54.14 O
ATOM 4 OP2 G B 679 58.200 71.349 50.187 1.00 55.01 O
ATOM 5 O5' G B 679 59.979 69.701 49.547 1.00 54.71 O
ATOM 6 C5' G B 679 60.720 68.485 49.710 1.00 56.22 C
ATOM 7 C4' G B 679 61.808 68.408 48.683 1.00 57.08 C
ATOM 8 O4' G B 679 61.239 68.267 47.353 1.00 58.08 O
ATOM 9 C3' G B 679 62.641 69.672 48.574 1.00 57.28 C
ATOM 10 O3' G B 679 63.630 69.788 49.579 1.00 56.05 O
ATOM 11 C2' G B 679 63.253 69.541 47.194 1.00 57.96 C
ATOM 12 O2' G B 679 64.396 68.710 47.176 1.00 58.80 O
ATOM 13 C1' G B 679 62.080 68.931 46.419 1.00 58.98 C
ATOM 14 N9 G B 679 61.326 70.005 45.789 1.00 59.75 N
ATOM 15 C8 G B 679 60.258 70.713 46.289 1.00 59.77 C
ATOM 16 N7 G B 679 59.845 71.649 45.476 1.00 60.21 N
ATOM 17 C5 G B 679 60.679 71.536 44.375 1.00 60.89 C
ATOM 18 C6 G B 679 60.708 72.273 43.170 1.00 61.69 C
ATOM 19 O6 G B 679 59.969 73.206 42.817 1.00 60.35 O
ATOM 20 N1 G B 679 61.727 71.827 42.327 1.00 62.45 N
ATOM 21 C2 G B 679 62.595 70.800 42.614 1.00 62.46 C
ATOM 22 N2 G B 679 63.499 70.508 41.689 1.00 64.18 N
ATOM 23 N3 G B 679 62.573 70.109 43.729 1.00 60.92 N
ATOM 24 C4 G B 679 61.596 70.526 44.557 1.00 60.57 C
ATOM 25 P A B 680 63.969 71.244 50.165 1.00 56.63 P
ATOM 26 OP1 A B 680 65.069 71.188 51.165 1.00 56.32 O
ATOM 27 OP2 A B 680 62.653 71.827 50.537 1.00 54.63 O
ATOM 28 O5' A B 680 64.520 72.060 48.913 1.00 57.26 O
TER

Atoms:
OP1: (63.846,75.321,44.272)
OP2: (63.505,73.137,45.590)
C3': (66.834,72.162,41.427)
C1': (68.286,71.008,42.901)
C5': (66.416,74.064,43.162)
O4': (68.031,72.286,43.454)
C8: (66.359,70.194,44.360)
O2': (69.049,71.298,40.669)
C6: (66.989,66.786,44.966)
C5: (66.874,68.148,44.635)
C4: (67.883,68.695,43.854)
P: (64.414,74.095,44.915)
C4': (67.390,73.125,42.467)
C2': (67.880,71.047,41.427)
C2: (68.951,66.772,43.746)
N1: (68.057,66.112,44.493)
N3: (68.965,68.052,43.374)
N6: (66.108,66.132,45.722)
N7: (65.916,69.106,44.945)
N9: (67.541,70.017,43.674)
O5': (65.369,73.335,43.875)
O3': (66.695,72.803,40.150)
OP1: (59.281,69.774,51.903)
OP2: (58.200,71.349,50.187)
C3': (62.641,69.672,48.574)
C1': (62.080,68.931,46.419)
C5': (60.720,68.485,49.710)
O6: (59.969,73.206,42.817)
O4': (61.239,68.267,47.353)
C8: (60.258,70.713,46.289)
C2: (62.595,70.800,42.614)
C6: (60.708,72.273,43.170)
C5: (60.679,71.536,44.375)
C4: (61.596,70.526,44.557)
P: (58.771,70.025,50.527)
C4': (61.808,68.408,48.683)
C2': (63.253,69.541,47.194)
O2': (64.396,68.710,47.176)
N1: (61.727,71.827,42.327)
N2: (63.499,70.508,41.689)
N3: (62.573,70.109,43.729)
N7: (59.845,71.649,45.476)
N9: (61.326,70.005,45.789)
O5': (59.979,69.701,49.547)
O3': (63.630,69.788,49.579)
Image (generated by PyMOL):
PyMOL image
show in jmol