Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0236:0234
Extra
PDB:
ATOM 1 O3' A A 235 91.692 124.245 -8.193 1.00 59.72 O
ATOM 2 P A A 236 91.150 124.961 -9.520 1.00 61.43 P
ATOM 3 OP1 A A 236 92.215 124.834 -10.550 1.00 61.63 O
ATOM 4 OP2 A A 236 90.656 126.307 -9.127 1.00 60.13 O
ATOM 5 O5' A A 236 89.894 124.084 -9.968 1.00 59.69 O
ATOM 6 C5' A A 236 88.675 124.063 -9.190 1.00 56.89 C
ATOM 7 C4' A A 236 87.779 122.936 -9.653 1.00 55.26 C
ATOM 8 O4' A A 236 88.567 121.730 -9.778 1.00 54.85 O
ATOM 9 C3' A A 236 86.659 122.567 -8.694 1.00 55.18 C
ATOM 10 O3' A A 236 85.494 123.348 -8.940 1.00 56.63 O
ATOM 11 C2' A A 236 86.383 121.104 -9.033 1.00 54.82 C
ATOM 12 O2' A A 236 85.463 120.943 -10.092 1.00 53.24 O
ATOM 13 C1' A A 236 87.767 120.608 -9.465 1.00 54.91 C
ATOM 14 N9 A A 236 88.509 119.773 -8.524 1.00 56.89 N
ATOM 15 C8 A A 236 89.060 118.543 -8.782 1.00 58.41 C
ATOM 16 N7 A A 236 89.734 118.041 -7.776 1.00 59.08 N
ATOM 17 C5 A A 236 89.604 118.997 -6.780 1.00 58.98 C
ATOM 18 C6 A A 236 90.094 119.063 -5.467 1.00 59.31 C
ATOM 19 N6 A A 236 90.842 118.110 -4.906 1.00 58.56 N
ATOM 20 N1 A A 236 89.783 120.155 -4.738 1.00 60.61 N
ATOM 21 C2 A A 236 89.025 121.108 -5.298 1.00 60.66 C
ATOM 22 N3 A A 236 88.505 121.160 -6.521 1.00 59.74 N
ATOM 23 C4 A A 236 88.838 120.063 -7.222 1.00 58.61 C
ATOM 24 P G A 237 85.230 124.693 -8.100 1.00 60.39 P
ATOM 25 OP1 G A 237 83.773 124.975 -8.209 1.00 58.72 O
ATOM 26 OP2 G A 237 86.214 125.731 -8.508 1.00 60.44 O
ATOM 27 O5' G A 237 85.569 124.299 -6.594 1.00 61.84 O
TER
ATOM 1 O3' C B 233 92.669 112.126 -9.539 1.00 60.74 O
ATOM 2 P G B 234 94.151 112.746 -9.561 1.00 62.42 P
ATOM 3 OP1 G B 234 94.476 113.130 -10.965 1.00 64.66 O
ATOM 4 OP2 G B 234 95.046 111.805 -8.830 1.00 59.26 O
ATOM 5 O5' G B 234 93.972 114.077 -8.714 1.00 59.27 O
ATOM 6 C5' G B 234 92.805 114.899 -8.900 1.00 59.95 C
ATOM 7 C4' G B 234 92.855 116.077 -7.970 1.00 60.78 C
ATOM 8 O4' G B 234 92.644 115.613 -6.606 1.00 61.70 O
ATOM 9 C3' G B 234 94.194 116.800 -7.977 1.00 60.35 C
ATOM 10 O3' G B 234 94.001 118.193 -7.803 1.00 61.34 O
ATOM 11 C2' G B 234 94.918 116.173 -6.792 1.00 60.00 C
ATOM 12 O2' G B 234 95.926 116.989 -6.235 1.00 58.16 O
ATOM 13 C1' G B 234 93.766 115.945 -5.815 1.00 61.18 C
ATOM 14 N9 G B 234 94.023 114.849 -4.884 1.00 62.43 N
ATOM 15 C8 G B 234 94.601 113.633 -5.172 1.00 62.57 C
ATOM 16 N7 G B 234 94.793 112.894 -4.114 1.00 63.92 N
ATOM 17 C5 G B 234 94.295 113.658 -3.066 1.00 64.17 C
ATOM 18 C6 G B 234 94.257 113.391 -1.671 1.00 64.34 C
ATOM 19 O6 G B 234 94.690 112.406 -1.062 1.00 63.34 O
ATOM 20 N1 G B 234 93.649 114.428 -0.970 1.00 64.46 N
ATOM 21 C2 G B 234 93.151 115.577 -1.533 1.00 63.72 C
ATOM 22 N2 G B 234 92.585 116.449 -0.688 1.00 63.48 N
ATOM 23 N3 G B 234 93.200 115.848 -2.827 1.00 62.97 N
ATOM 24 C4 G B 234 93.784 114.853 -3.529 1.00 62.94 C
ATOM 25 P A B 235 94.568 119.207 -8.909 1.00 60.10 P
ATOM 26 OP1 A B 235 94.128 118.691 -10.230 1.00 61.24 O
ATOM 27 OP2 A B 235 96.020 119.406 -8.643 1.00 58.40 O
ATOM 28 O5' A B 235 93.781 120.558 -8.621 1.00 58.09 O
TER
ATOM 2 P A A 236 91.150 124.961 -9.520 1.00 61.43 P
ATOM 3 OP1 A A 236 92.215 124.834 -10.550 1.00 61.63 O
ATOM 4 OP2 A A 236 90.656 126.307 -9.127 1.00 60.13 O
ATOM 5 O5' A A 236 89.894 124.084 -9.968 1.00 59.69 O
ATOM 6 C5' A A 236 88.675 124.063 -9.190 1.00 56.89 C
ATOM 7 C4' A A 236 87.779 122.936 -9.653 1.00 55.26 C
ATOM 8 O4' A A 236 88.567 121.730 -9.778 1.00 54.85 O
ATOM 9 C3' A A 236 86.659 122.567 -8.694 1.00 55.18 C
ATOM 10 O3' A A 236 85.494 123.348 -8.940 1.00 56.63 O
ATOM 11 C2' A A 236 86.383 121.104 -9.033 1.00 54.82 C
ATOM 12 O2' A A 236 85.463 120.943 -10.092 1.00 53.24 O
ATOM 13 C1' A A 236 87.767 120.608 -9.465 1.00 54.91 C
ATOM 14 N9 A A 236 88.509 119.773 -8.524 1.00 56.89 N
ATOM 15 C8 A A 236 89.060 118.543 -8.782 1.00 58.41 C
ATOM 16 N7 A A 236 89.734 118.041 -7.776 1.00 59.08 N
ATOM 17 C5 A A 236 89.604 118.997 -6.780 1.00 58.98 C
ATOM 18 C6 A A 236 90.094 119.063 -5.467 1.00 59.31 C
ATOM 19 N6 A A 236 90.842 118.110 -4.906 1.00 58.56 N
ATOM 20 N1 A A 236 89.783 120.155 -4.738 1.00 60.61 N
ATOM 21 C2 A A 236 89.025 121.108 -5.298 1.00 60.66 C
ATOM 22 N3 A A 236 88.505 121.160 -6.521 1.00 59.74 N
ATOM 23 C4 A A 236 88.838 120.063 -7.222 1.00 58.61 C
ATOM 24 P G A 237 85.230 124.693 -8.100 1.00 60.39 P
ATOM 25 OP1 G A 237 83.773 124.975 -8.209 1.00 58.72 O
ATOM 26 OP2 G A 237 86.214 125.731 -8.508 1.00 60.44 O
ATOM 27 O5' G A 237 85.569 124.299 -6.594 1.00 61.84 O
TER
ATOM 1 O3' C B 233 92.669 112.126 -9.539 1.00 60.74 O
ATOM 2 P G B 234 94.151 112.746 -9.561 1.00 62.42 P
ATOM 3 OP1 G B 234 94.476 113.130 -10.965 1.00 64.66 O
ATOM 4 OP2 G B 234 95.046 111.805 -8.830 1.00 59.26 O
ATOM 5 O5' G B 234 93.972 114.077 -8.714 1.00 59.27 O
ATOM 6 C5' G B 234 92.805 114.899 -8.900 1.00 59.95 C
ATOM 7 C4' G B 234 92.855 116.077 -7.970 1.00 60.78 C
ATOM 8 O4' G B 234 92.644 115.613 -6.606 1.00 61.70 O
ATOM 9 C3' G B 234 94.194 116.800 -7.977 1.00 60.35 C
ATOM 10 O3' G B 234 94.001 118.193 -7.803 1.00 61.34 O
ATOM 11 C2' G B 234 94.918 116.173 -6.792 1.00 60.00 C
ATOM 12 O2' G B 234 95.926 116.989 -6.235 1.00 58.16 O
ATOM 13 C1' G B 234 93.766 115.945 -5.815 1.00 61.18 C
ATOM 14 N9 G B 234 94.023 114.849 -4.884 1.00 62.43 N
ATOM 15 C8 G B 234 94.601 113.633 -5.172 1.00 62.57 C
ATOM 16 N7 G B 234 94.793 112.894 -4.114 1.00 63.92 N
ATOM 17 C5 G B 234 94.295 113.658 -3.066 1.00 64.17 C
ATOM 18 C6 G B 234 94.257 113.391 -1.671 1.00 64.34 C
ATOM 19 O6 G B 234 94.690 112.406 -1.062 1.00 63.34 O
ATOM 20 N1 G B 234 93.649 114.428 -0.970 1.00 64.46 N
ATOM 21 C2 G B 234 93.151 115.577 -1.533 1.00 63.72 C
ATOM 22 N2 G B 234 92.585 116.449 -0.688 1.00 63.48 N
ATOM 23 N3 G B 234 93.200 115.848 -2.827 1.00 62.97 N
ATOM 24 C4 G B 234 93.784 114.853 -3.529 1.00 62.94 C
ATOM 25 P A B 235 94.568 119.207 -8.909 1.00 60.10 P
ATOM 26 OP1 A B 235 94.128 118.691 -10.230 1.00 61.24 O
ATOM 27 OP2 A B 235 96.020 119.406 -8.643 1.00 58.40 O
ATOM 28 O5' A B 235 93.781 120.558 -8.621 1.00 58.09 O
TER
Atoms:
OP1: (92.215,124.834,-10.550)
OP2: (90.656,126.307,-9.127)
C3': (86.659,122.567,-8.694)
C1': (87.767,120.608,-9.465)
C5': (88.675,124.063,-9.190)
O4': (88.567,121.730,-9.778)
C8: (89.060,118.543,-8.782)
O2': (85.463,120.943,-10.092)
C6: (90.094,119.063,-5.467)
C5: (89.604,118.997,-6.780)
C4: (88.838,120.063,-7.222)
P: (91.150,124.961,-9.520)
C4': (87.779,122.936,-9.653)
C2': (86.383,121.104,-9.033)
C2: (89.025,121.108,-5.298)
N1: (89.783,120.155,-4.738)
N3: (88.505,121.160,-6.521)
N6: (90.842,118.110,-4.906)
N7: (89.734,118.041,-7.776)
N9: (88.509,119.773,-8.524)
O5': (89.894,124.084,-9.968)
O3': (85.494,123.348,-8.940)
OP2: (90.656,126.307,-9.127)
C3': (86.659,122.567,-8.694)
C1': (87.767,120.608,-9.465)
C5': (88.675,124.063,-9.190)
O4': (88.567,121.730,-9.778)
C8: (89.060,118.543,-8.782)
O2': (85.463,120.943,-10.092)
C6: (90.094,119.063,-5.467)
C5: (89.604,118.997,-6.780)
C4: (88.838,120.063,-7.222)
P: (91.150,124.961,-9.520)
C4': (87.779,122.936,-9.653)
C2': (86.383,121.104,-9.033)
C2: (89.025,121.108,-5.298)
N1: (89.783,120.155,-4.738)
N3: (88.505,121.160,-6.521)
N6: (90.842,118.110,-4.906)
N7: (89.734,118.041,-7.776)
N9: (88.509,119.773,-8.524)
O5': (89.894,124.084,-9.968)
O3': (85.494,123.348,-8.940)
OP1: (94.476,113.130,-10.965)
OP2: (95.046,111.805,-8.830)
C3': (94.194,116.800,-7.977)
C1': (93.766,115.945,-5.815)
C5': (92.805,114.899,-8.900)
O6: (94.690,112.406,-1.062)
O4': (92.644,115.613,-6.606)
C8: (94.601,113.633,-5.172)
C2: (93.151,115.577,-1.533)
C6: (94.257,113.391,-1.671)
C5: (94.295,113.658,-3.066)
C4: (93.784,114.853,-3.529)
P: (94.151,112.746,-9.561)
C4': (92.855,116.077,-7.970)
C2': (94.918,116.173,-6.792)
O2': (95.926,116.989,-6.235)
N1: (93.649,114.428,-0.970)
N2: (92.585,116.449,-0.688)
N3: (93.200,115.848,-2.827)
N7: (94.793,112.894,-4.114)
N9: (94.023,114.849,-4.884)
O5': (93.972,114.077,-8.714)
O3': (94.001,118.193,-7.803)
OP2: (95.046,111.805,-8.830)
C3': (94.194,116.800,-7.977)
C1': (93.766,115.945,-5.815)
C5': (92.805,114.899,-8.900)
O6: (94.690,112.406,-1.062)
O4': (92.644,115.613,-6.606)
C8: (94.601,113.633,-5.172)
C2: (93.151,115.577,-1.533)
C6: (94.257,113.391,-1.671)
C5: (94.295,113.658,-3.066)
C4: (93.784,114.853,-3.529)
P: (94.151,112.746,-9.561)
C4': (92.855,116.077,-7.970)
C2': (94.918,116.173,-6.792)
O2': (95.926,116.989,-6.235)
N1: (93.649,114.428,-0.970)
N2: (92.585,116.449,-0.688)
N3: (93.200,115.848,-2.827)
N7: (94.793,112.894,-4.114)
N9: (94.023,114.849,-4.884)
O5': (93.972,114.077,-8.714)
O3': (94.001,118.193,-7.803)
Image (generated by PyMOL):