ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02718:02716

Extra

PDB:
ATOM 1 O3' U A2717 105.857 210.414 112.417 1.00 84.13 O
ATOM 2 P A A2718 104.609 209.548 112.944 1.00 83.27 P
ATOM 3 OP1 A A2718 104.128 210.163 114.212 1.00 83.54 O
ATOM 4 OP2 A A2718 105.031 208.124 112.937 1.00 83.65 O
ATOM 5 O5' A A2718 103.486 209.765 111.832 1.00 82.35 O
ATOM 6 C5' A A2718 102.917 211.066 111.605 1.00 80.23 C
ATOM 7 C4' A A2718 102.367 211.160 110.203 1.00 80.41 C
ATOM 8 O4' A A2718 103.405 210.773 109.268 1.00 80.54 O
ATOM 9 C3' A A2718 101.216 210.230 109.856 1.00 81.38 C
ATOM 10 O3' A A2718 99.970 210.762 110.292 1.00 83.38 O
ATOM 11 C2' A A2718 101.306 210.161 108.334 1.00 80.96 C
ATOM 12 O2' A A2718 100.756 211.283 107.673 1.00 80.37 O
ATOM 13 C1' A A2718 102.819 210.168 108.126 1.00 79.53 C
ATOM 14 N9 A A2718 103.379 208.830 107.968 1.00 78.08 N
ATOM 15 C8 A A2718 104.006 208.044 108.904 1.00 78.14 C
ATOM 16 N7 A A2718 104.410 206.887 108.438 1.00 78.37 N
ATOM 17 C5 A A2718 104.022 206.912 107.104 1.00 78.43 C
ATOM 18 C6 A A2718 104.168 205.980 106.054 1.00 78.59 C
ATOM 19 N6 A A2718 104.781 204.800 106.189 1.00 78.07 N
ATOM 20 N1 A A2718 103.660 206.313 104.845 1.00 78.33 N
ATOM 21 C2 A A2718 103.057 207.506 104.708 1.00 78.62 C
ATOM 22 N3 A A2718 102.868 208.466 105.615 1.00 78.17 N
ATOM 23 C4 A A2718 103.379 208.101 106.804 1.00 78.27 C
ATOM 24 P A A2719 98.713 209.782 110.515 1.00 84.41 P
ATOM 25 OP1 A A2719 97.529 210.653 110.753 1.00 83.98 O
ATOM 26 OP2 A A2719 99.086 208.758 111.524 1.00 84.01 O
ATOM 27 O5' A A2719 98.530 209.053 109.109 1.00 82.08 O
TER

ATOM 1 O3' G B2715 108.746 201.564 115.367 1.00 76.24 O
ATOM 2 P G B2716 109.438 202.928 114.859 1.00 77.56 P
ATOM 3 OP1 G B2716 110.780 202.562 114.342 1.00 76.17 O
ATOM 4 OP2 G B2716 109.313 203.960 115.920 1.00 78.64 O
ATOM 5 O5' G B2716 108.546 203.397 113.628 1.00 77.43 O
ATOM 6 C5' G B2716 108.684 202.775 112.341 1.00 76.94 C
ATOM 7 C4' G B2716 107.614 203.277 111.412 1.00 76.57 C
ATOM 8 O4' G B2716 106.317 202.912 111.948 1.00 75.59 O
ATOM 9 C3' G B2716 107.535 204.787 111.288 1.00 77.93 C
ATOM 10 O3' G B2716 108.502 205.308 110.383 1.00 80.75 O
ATOM 11 C2' G B2716 106.101 204.999 110.824 1.00 76.84 C
ATOM 12 O2' G B2716 105.904 204.786 109.439 1.00 77.72 O
ATOM 13 C1' G B2716 105.372 203.919 111.627 1.00 75.65 C
ATOM 14 N9 G B2716 104.808 204.452 112.862 1.00 74.13 N
ATOM 15 C8 G B2716 105.244 204.252 114.150 1.00 73.34 C
ATOM 16 N7 G B2716 104.538 204.904 115.032 1.00 73.33 N
ATOM 17 C5 G B2716 103.575 205.566 114.281 1.00 72.58 C
ATOM 18 C6 G B2716 102.530 206.440 114.682 1.00 73.19 C
ATOM 19 O6 G B2716 102.229 206.814 115.825 1.00 74.44 O
ATOM 20 N1 G B2716 101.798 206.893 113.589 1.00 72.71 N
ATOM 21 C2 G B2716 102.039 206.552 112.280 1.00 72.46 C
ATOM 22 N2 G B2716 101.237 207.102 111.359 1.00 72.54 N
ATOM 23 N3 G B2716 102.999 205.736 111.899 1.00 72.39 N
ATOM 24 C4 G B2716 103.725 205.287 112.943 1.00 72.97 C
ATOM 25 P U B2717 109.382 206.582 110.812 1.00 81.67 P
ATOM 26 OP1 U B2717 110.037 207.102 109.584 1.00 81.19 O
ATOM 27 OP2 U B2717 110.214 206.174 111.978 1.00 81.07 O
ATOM 28 O5' U B2717 108.296 207.653 111.285 1.00 82.32 O
TER

Atoms:
OP1: (104.128,210.163,114.212)
OP2: (105.031,208.124,112.937)
C3': (101.216,210.230,109.856)
C1': (102.819,210.168,108.126)
C5': (102.917,211.066,111.605)
O4': (103.405,210.773,109.268)
C8: (104.006,208.044,108.904)
O2': (100.756,211.283,107.673)
C6: (104.168,205.980,106.054)
C5: (104.022,206.912,107.104)
C4: (103.379,208.101,106.804)
P: (104.609,209.548,112.944)
C4': (102.367,211.160,110.203)
C2': (101.306,210.161,108.334)
C2: (103.057,207.506,104.708)
N1: (103.660,206.313,104.845)
N3: (102.868,208.466,105.615)
N6: (104.781,204.800,106.189)
N7: (104.410,206.887,108.438)
N9: (103.379,208.830,107.968)
O5': (103.486,209.765,111.832)
O3': (99.970,210.762,110.292)
OP1: (110.780,202.562,114.342)
OP2: (109.313,203.960,115.920)
C3': (107.535,204.787,111.288)
C1': (105.372,203.919,111.627)
C5': (108.684,202.775,112.341)
O6: (102.229,206.814,115.825)
O4': (106.317,202.912,111.948)
C8: (105.244,204.252,114.150)
C2: (102.039,206.552,112.280)
C6: (102.530,206.440,114.682)
C5: (103.575,205.566,114.281)
C4: (103.725,205.287,112.943)
P: (109.438,202.928,114.859)
C4': (107.614,203.277,111.412)
C2': (106.101,204.999,110.824)
O2': (105.904,204.786,109.439)
N1: (101.798,206.893,113.589)
N2: (101.237,207.102,111.359)
N3: (102.999,205.736,111.899)
N7: (104.538,204.904,115.032)
N9: (104.808,204.452,112.862)
O5': (108.546,203.397,113.628)
O3': (108.502,205.308,110.383)
Image (generated by PyMOL):
PyMOL image
show in jmol